Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g069010.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RNM2_RICCO)
Sequence	ATGGTTAATCTGCCAATGGACCAAATGCATCACTTTCAAGCCTTACCTGCTCATATTCAT GGAGATATGTCAGTGCTTCTGTTTCCTTTTAGAAAATGCTGGCAGCAACAGAAACAAAAC CATTTTCAGAGACCGGCATTGTCTTCTTCTTCCTCGCCGGTCTCCGGCTGTCAGCCCAGA AGGTATTATTTGGGCAGATTCAAAAGACGCTTCCGTTCTGAACCTAATCTAAAACCACTA ACTTCCCGCATTGTTGATCTTACTCGCAGAAGGCAACTCCACCAGATTTTTGTGGAAATT GAGATTGCAAAGAAGCGACATGGACAGTTGAACACCATTGTTATGAATGCAGTGATGCAG GCTTGTGTTCATTGTGCTGATATAGAATCTGCCTTGAGGCTCTTTGATGAAATGTCTGGC CCAGAGGGTTGTGGTGTTGATAATATCACTTACGCTACACTTTTAAAGGGTTTGGGTGAT GCCCGAAGAATTGATCAAGCATTTCAATTACTTGAGGCTGTTGAACAAGGTACTGCTGCT GGAAGTCCAAAACTTTCACCTCCCCTTGTTAGAGGTCTGCTGAATTCTCTAATTGAAGCA GCTGATGCAGGGGATCTACGCCGTGCTAATGGTCTTCTTGCACGTTATGGTTTTGTATTT CACGAGGGCGGATATCCATCCATCTTGGTCTACAACTTATTGATGAAGGGGTACATAAAC ACAGGTTGTCCTGAGGTAGCGCTACGTTTGCATGATGAAATACTAAGACATGGACTGAAC CTTGACAAGCTCACATATAATACACTAATCCTAGCATGTGTGGAGTCTGAAAAGTTGGAT GTTGCAATGCAGTTCTTTGAGGGCATGAAGGACAGAGCACAAACTGCTGCTGATGATGAC ATTTTACCAGATGTAGTTACCTACACTACGTTGCTGAAGGGTTTTGGTCATGCCCAGGAT CTCATTTCAGTTCAAAAGATTTTCATAGAAATGAAATTATCCAACAACTTGCATATTGAT CGAGTTGCTTACACTGCAATCATTGATGCCTTCTTGAATTGTGGGACAATAAAAGGCGCT CTGACTGTGTATGGGGAACTACTAAAGAAAGCTGGAGAAGATTCTAGCTTGAGGCCAAAG CCTCATCTTTTCCTTGCTCTGATGCGTGCTTTTGCTGTTAGAGGAGAGTATGAAATGGTT AAAATACTGCATGGACGCATGTGGCTAGATTCATCTGGAACAATCACCTCTAAAGTTAAT GAAGAGGCTGATCATCTCCTAATGGAGGCAGCATTGAGCAATGGACAGTTGGATTTGGCC CTACAATACATGAAAGGCAATGTTGAGAAATGGAAGCAAATACCATGGGCTAGTCGGGGT GGAATGGTTGCTCTGCGAATTGAAGCATTACTTGGTTGCAGTGTTTCTATATTTAGTCCT TGCATACTACCACAGGTGTCAGTACGCGATACTATTGAGCATATCATGGTTCCATTTACT GAAGCACAGCCTTTGCAAGCTACCCTGAAACTAAAGCAAGTGGTCATGCGTTTCTTCAGG GATTCGACTGTTCCAGTCATAGATGATTGGGGAAGTTGTGTTGGAATACTGCATTGTGAA GACTGCAATGAGCTGGATGCGCCGCTTTCAGCCATGATGAGAAGTCCACCTCCTTCTGTG ACAACCTCAACATCCATTGGTCGTGTTATTGATCTAATGCTAGAGAAGAAGTACAAAATG GTTATTGTTGCAAAATACGAAAATGTGCGCGGGATGTTTTACAGCTCCAGTGTAAGGGCT GTCGGAGTTTTTACGTCTGAACAGCTATATAAGCTTGCTCCAACTTCATCAGAGCTAAGT CTTCAATATTCTTCTGCCTGTAGAGAACATATTGAAATTTGTAGGTAG

Peptide Sequence

PEP ID	Solyc08g069010.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RNM2_RICCO)
Sequence	MVNLPMDQMHHFQALPAHIHGDMSVLLFPFRKCWQQQKQNHFQRPALSSSSSPVSGCQPR RYYLGRFKRRFRSEPNLKPLTSRIVDLTRRRQLHQIFVEIEIAKKRHGQLNTIVMNAVMQ ACVHCADIESALRLFDEMSGPEGCGVDNITYATLLKGLGDARRIDQAFQLLEAVEQGTAA GSPKLSPPLVRGLLNSLIEAADAGDLRRANGLLARYGFVFHEGGYPSILVYNLLMKGYIN TGCPEVALRLHDEILRHGLNLDKLTYNTLILACVESEKLDVAMQFFEGMKDRAQTAADDD ILPDVVTYTTLLKGFGHAQDLISVQKIFIEMKLSNNLHIDRVAYTAIIDAFLNCGTIKGA LTVYGELLKKAGEDSSLRPKPHLFLALMRAFAVRGEYEMVKILHGRMWLDSSGTITSKVN EEADHLLMEAALSNGQLDLALQYMKGNVEKWKQIPWASRGGMVALRIEALLGCSVSIFSP CILPQVSVRDTIEHIMVPFTEAQPLQATLKLKQVVMRFFRDSTVPVIDDWGSCVGILHCE DCNELDAPLSAMMRSPPPSVTTSTSIGRVIDLMLEKKYKMVIVAKYENVRGMFYSSSVRA VGVFTSEQLYKLAPTSSELSLQYSSACREHIEICR*

Transcript Sequence

Transcript ID	Solyc08g069010.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RNM2_RICCO)
Sequence	GGATATGTAGATGATATAAAATATTGGGAATCCTCACTTTACCCGCCAATTGTCCTTCTC TCTTCCACATTATCCATTAACCCCCAATTCCTTCACTCTTCAACCTCCAATTGCTGCCGC CGATCAAATGTGGAGCTATGGTTAATCTGCCAATGGACCAAATGCATCACTTTCAAGCCT TACCTGCTCATATTCATGGAGATATGTCAGTGCTTCTGTTTCCTTTTAGAAAATGCTGGC AGCAACAGAAACAAAACCATTTTCAGAGACCGGCATTGTCTTCTTCTTCCTCGCCGGTCT CCGGCTGTCAGCCCAGAAGGTATTATTTGGGCAGATTCAAAAGACGCTTCCGTTCTGAAC CTAATCTAAAACCACTAACTTCCCGCATTGTTGATCTTACTCGCAGAAGGCAACTCCACC AGATTTTTGTGGAAATTGAGATTGCAAAGAAGCGACATGGACAGTTGAACACCATTGTTA TGAATGCAGTGATGCAGGCTTGTGTTCATTGTGCTGATATAGAATCTGCCTTGAGGCTCT TTGATGAAATGTCTGGCCCAGAGGGTTGTGGTGTTGATAATATCACTTACGCTACACTTT TAAAGGGTTTGGGTGATGCCCGAAGAATTGATCAAGCATTTCAATTACTTGAGGCTGTTG AACAAGGTACTGCTGCTGGAAGTCCAAAACTTTCACCTCCCCTTGTTAGAGGTCTGCTGA ATTCTCTAATTGAAGCAGCTGATGCAGGGGATCTACGCCGTGCTAATGGTCTTCTTGCAC GTTATGGTTTTGTATTTCACGAGGGCGGATATCCATCCATCTTGGTCTACAACTTATTGA TGAAGGGGTACATAAACACAGGTTGTCCTGAGGTAGCGCTACGTTTGCATGATGAAATAC TAAGACATGGACTGAACCTTGACAAGCTCACATATAATACACTAATCCTAGCATGTGTGG AGTCTGAAAAGTTGGATGTTGCAATGCAGTTCTTTGAGGGCATGAAGGACAGAGCACAAA CTGCTGCTGATGATGACATTTTACCAGATGTAGTTACCTACACTACGTTGCTGAAGGGTT TTGGTCATGCCCAGGATCTCATTTCAGTTCAAAAGATTTTCATAGAAATGAAATTATCCA ACAACTTGCATATTGATCGAGTTGCTTACACTGCAATCATTGATGCCTTCTTGAATTGTG GGACAATAAAAGGCGCTCTGACTGTGTATGGGGAACTACTAAAGAAAGCTGGAGAAGATT CTAGCTTGAGGCCAAAGCCTCATCTTTTCCTTGCTCTGATGCGTGCTTTTGCTGTTAGAG GAGAGTATGAAATGGTTAAAATACTGCATGGACGCATGTGGCTAGATTCATCTGGAACAA TCACCTCTAAAGTTAATGAAGAGGCTGATCATCTCCTAATGGAGGCAGCATTGAGCAATG GACAGTTGGATTTGGCCCTACAATACATGAAAGGCAATGTTGAGAAATGGAAGCAAATAC CATGGGCTAGTCGGGGTGGAATGGTTGCTCTGCGAATTGAAGCATTACTTGGTTGCAGTG TTTCTATATTTAGTCCTTGCATACTACCACAGGTGTCAGTACGCGATACTATTGAGCATA TCATGGTTCCATTTACTGAAGCACAGCCTTTGCAAGCTACCCTGAAACTAAAGCAAGTGG TCATGCGTTTCTTCAGGGATTCGACTGTTCCAGTCATAGATGATTGGGGAAGTTGTGTTG GAATACTGCATTGTGAAGACTGCAATGAGCTGGATGCGCCGCTTTCAGCCATGATGAGAA GTCCACCTCCTTCTGTGACAACCTCAACATCCATTGGTCGTGTTATTGATCTAATGCTAG AGAAGAAGTACAAAATGGTTATTGTTGCAAAATACGAAAATGTGCGCGGGATGTTTTACA GCTCCAGTGTAAGGGCTGTCGGAGTTTTTACGTCTGAACAGCTATATAAGCTTGCTCCAA CTTCATCAGAGCTAAGTCTTCAATATTCTTCTGCCTGTAGAGAACATATTGAAATTTGTA GGTAGTATACCTCGAGAAAGAAGTTTGCTTGAACTTGCTCTTTTTCCACTGTAGAGTAGG CTATCATTTCTTTTGGGCTGCTGAGTTTTTCGTGTGTCACTTATTGCGTGCTAGATTGCA ATACTATTGACTTTGAATGGTTTGACTATCTGTTCAACTTTATATAATGTTGGTGCTGGG CCTGACAAAAATATTCACAGTATATGGAAATTTTGGAGTTGTTGAGACAACTAAAAAACT AAATGTGTACCATCTGTGGGTATGGAAGAGCTTTGACTTTACCAGCATTAATGGAAAACA GGTTCCTCATCGCTCTTTTTAAATGAGATGATCCCAAAATTTAATATGTTATCAGAACAT CCATCAGACTATATAATTTGAAAATGAAAAACACTAAAAAGAAGTGGAAAATTCAACTTA TGTATTCATTCTATCTCCCTTGTATAATTTTCGTTCTTTTCAAGCACAATTTTGTATTTC TAAATGGTATAAATATTAGTGAAAAACCACTTGTGATGACGGTTTTGCTTTTGTCTTCAA TCTTGGTCGAATTATAAACCTAATTTTTAGAACTTCCACTTCTATATCTTGTTCAAATTT CATCAGTTTCTAGTTCACATCCTGAGATTTAATGTACTACCAAGACCAGAAAATTTCTTA AAAGAGCCTACAACTTTTATCGTAAATGGACTTCCCTGTGGTTTTTTAGTGTCTATTGAA TAATCAAAACTTGTGTGGCTGCTGCGTTTATTCATGTTATAGCGTGTCTGTTGTAAGTAA AAGAGCTCATGTCATAAATTGCTAATGAAGATCAGACCCCGTTGTAGACAATTAAGCGTG ACAATACATGCGATGCAATAGATATATCAGTCAATTACGTGATCAATGACAAGGTAATTG TTTTTCTCATCTTTTCAAGACATTGCATAACAAATTTGTATCTTGCTGCCTTTTTTTTCA TAATCATGATATATAAATAGTGTTCAAACTTATAAAAGTAGCATAGAAAATAATTATTGC CCACTATTTCACATCATATATGAAAAATAATTACTATTCCCACTTGAAGAATTCAATGCG GTACAGTATTGCTTTTGGAAAACTACAGTAAGCATACAACAAGAAACGATTCACAAACTA AAACATTAGATGAAAATTCATTTGTGGTCTTGCCGGGAGATGACAGTTTCAAAAGCACCA GCCAGTGCTCTCACTTTGTTCTTCCTTTGCTCCCTAAGTTTGGTTGCAGTCTCTTCAATT ACATTATTTGAAACGACAGATTCATTATTCTTACCTTGCACCACGTGATGTAGAGATTTT GATGATGCTACATTCGTATTTTTCACTGGTTCTGCTTCTGTAGTTTCTTCTACACCGACT TCAACTTGCTTGGAACTGAGACTTTCAGTTTCTTCTACTATGGGAGTTTCTTTCTCTTGG TTTGTTTCTTCATCCTCCTCTTTCGATTCCTGATTCTCCTCTGTTGCATTTATAACGGTT TCTTCTTTTTCCTTCTCTGATAAATCAGGCTCATTAGGCTCATTGTTGATTTCTTCTGGT TCTTCAATTTTGGTTTCTGGATTTTCCACTAGTGTGGCTGAATCATCTGGAGCGTTGATG TCCTTCAATTCAGCACTGTTTACATTTTCATTACTAAGCTCTTCAATATGATCCTCTGTG GCTGAATCGTTTTCATTTTCATTGTCATTCTCATGCTCCCCTGCATCAGAATCAGCAATC ATTTCGTTGTCACTTATGGTGGTTTCCTTTTCCGTTTCATGAGTTGTTAGTTCTTGATGA TCCTCTGGTTCTGACTGTTCACCCTCATGAGAAATGACATTCTGAGCTATATCTGGAGAA TTTGCTGTTACTGATGCTTTTGTAGTTGAACCACTAGCACTATCATGCTTCCTGGTTGTG GTTGTGGTCGTCTTTCTTTTGGTCACTGGCCTAGAATTTAGGCCAGCACTGCGTTGTTTG CCAATGGCATCCTTACTAGTCGTAGTTTTTGATAATCTATCCAAAAGGGGTTTCTGGGAA GTGGAAGTCTTGGTTGATAAAGAAGACGATGAACGAGGAATTCTCTCCTTAGGACTAGGG GAAATTCGGGTTTTTGGTGAGGAAGAATGCAGGGGAGGGTTATTATCGAATGATCTCCTT CGAGCTAGATTAGAAGTTTTGGTACTGTGAGTGTTGTGCAGGTCACCTGAAGATGCAGAC TTCTTAGCTTGAGTAATTGTTGGTTTGAGGTAGCTAGGAACATTCTTGTTTAAGGAACTA GTGGTTAATGTTGGATCAGTTTGTTTTCTAACAGTTGATGTTGTTTTTGATGTGTTTGTT GTGCTTCTTTGGTGATGTATTGGTGATGTTCCTCTCTTCTCCTTCCCTGCAGGAGCTGGC TCTCTTGCTCTTGTTGCCATTCTTTTTGCTTTTGTCTAGAATAGATTCTATATCTGCAAA ACGAAACAGATGTTCAATAATTTTTGGAATCGCCCCACCAAATGGGTTCTGCAGTATGCG ATCCGATTTAGTCAAAGTTCCAAAGCAGGCACCAGACAGGGTCCTTTGAAAAACCTATCG TATATTTTAAAAGGACCTTTCAAACTTATCTCCTGAATTGGGGCATATGGTTGTCACTCG TCATGCCCCTTAGGCACTTTTGGACGCACTCAAATTCTGAGTCTGCGTTAGCTTGAACTA AAACTTATATATATTAAACGCAAAAATTGTATATAATAGACACATCTTACACAAGTCTTT AAAATAGCTTAGGTAGAGGATTCTT