Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g068960.3.1
CDS Infomation	Histidine kinase 5 (AHRD V3.3 *** W9RFB6_9ROSA)
Sequence	ATGGTTTGCGAGATGGAAAGTGATCAAACAGAGGACATGGAGATGGAAGTTGAAGTACTT TCGTCGATGTGGCCTGAAGATATGAATGAAAATGGAAAACAATTCAATATAGATTGGCCA GGAGAAGACCAAGATATGTTGGAGGAGGTTAATATCAATGAGGATTCCACCATAGTTGAT TTCAAGCGCCTTGTGGAGCTTACTAATTATAGCGAAAAAGGGTCATCTCAGTTGGCTTAC TTGGTGAAAAACTGGGAATATAAACAGGAAAATGCTGTAAGGCTACTTAGAGAAGAGCTT GACAATCTTAGCAAGCAACAACAAGAATCAGAGCTCAAGAAATTGGAGATATTGGAGAAG TATCAATTCGAGGAAGAACGATATGGAGGTGATAAACGTCCAATATCTATATTGGATGAA GACTTGAAGAGATACATATTCCAGGAGGCTCCTAGAAAAAGGAATGATGTGAAAATTCAA GATAAACTAGAAATAGATGCTGAGTATGACAGTATAAAATACTGGAAGCAGAGAGCTACA CATTTGGAGAAGTTGTTGGAAACGAGTGGTCAACGGGAGCAAATACTAACTGAGAAATTG CAGGAAAGCATAGAAAATCTTGAAAGACAGTCCTCTCCTGTGGAAGAATTATCTCAGGTT CTGAAAAGAGCAGATAATTTCTTACATTTTGTCCTCCAGAATGCACCAGTTGTCATTGGC CACCAGGACAATGAGTTACGCTATCGTTTTATCTACAATCATTTCCCAAGTTTGCGTGAA GAGGACATCATTGGCAAAACAGATGTAGAGATTTTTACTGGTGCTGGTGTAAAGGAATCT CAAGACTTCAAAAGAGAGGTTTTGGAACGGGGAATACCGGCAAAGAGGGAAATTACGTTT GACACAGGATTATTTGGGTCAAAGACTTTTTTAATATATGTTGAACCTGTGTTCAGTAAG GCAGGAGAGACCCTTGGTGTAAATTATATGGGAATGGAGATAACTGATCAGGTAAGGAAA AGAGAAAAAATGGCAAAACTGCGCGAAGAGATAGCTGTACAGAAGGCCAAGGAGACTGAA CTTAACAAAACTATTCACATAACAGAGGAAACAATGCGAGCGAAACAGATGCTTGCAACC ATGTCTCATGAGATTAGATCTCCTTTATCAGGAGTTGTCAGCATGACCGAGATTCTTTCT ACTACAAAACTGGACAAGGAACAGCGTCAGCTTGTGAATGTAATGTTGTCTTCAGGAGAT TTGGTTCTTCAACTGATAAATGACATCCTTGATCTGTCCAAAGTCGAATCAGGAGTAATG AAGTTGGAAGCCACAAAATTCCGACCAAGGGAGGTTGTTAAGCATGTCTTGCAAACTGCA GCAGCATCACTACAGAAAATATTAACATTGGAAGGCCACATTGCTGAAGATGTTCCCATT GAGGTTGTCGGGGATGTATTAAGAATTCGCCAGATTCTCACAAACTTGATCAGCAATGCT ATAAAATTTACTCATGAAGGGAAGGTTGGGATAAAGCTGTATGTGGTTTCCGGGCCATGT CCTGATGTGAAACAAGGATCCCATAAGAGGATGGCTTCTGATCATTCAAAGGTTTTAGCA AAGATATGTAAGGAAGATAAGTGTACATCACCATCTAACAATGCCCTTGATCGTAAAGGC TCTGGTGGATGCAAAGATGCCGATGGTGCAAATGAGAGATTGTTGCAGAAGGGGGAGGGT AACTATTCAGAACAAAATGGAGCTTCTATAGAAGATGAAGTGGATGATCCTAATCAACAG GAAACAACTGTGTGGATACGTTGTGATGTTTATGACACGGGGATTGGAATACCAGAAAAT GCTATACCGACTCTATTCAAGAAATATATGCAAGTCGGAGCAGATACTGCTCGGAAGTAT GGTGGGACAGGACTAGGATTGGCAATTTGTAAACAGCTGGCTGAGCTTATGGGAGGTCAT ATGACTGTATCCAGCAAAGAGCACCATGGATCTACCTTTACATTTATTCTACCTTACAAA GTTTCACCTGTATGCGATAGCTCGGATGATAATGAAGAACTCACCGAAATGGATAATCAT GATACTTCTTCTGAAGGAAATGATGATGATATAAATTCTGGTTTTTTCCAATTCCAACCG CGCACTTTAGGTTCTCTGTTTTCTTCTCATAGTTCTGGAAGAGCCCCAAAACTTTCACCA AACGGTTTTGGGTATAACACTTTGAATAAGACTAATGGATTTCAAGTGAACTCCCATTCT TTCCCTTTGGATAGCAATACATCAAAAGAGACAGGTTCAGTGGAAGATGCATGTTCAGTA GCTGATGCTGTTGAGACATGTTCTGATCCTGAATCTACCTTCAAACACACCCGAAATTCT GGCAATCCAAGTACGTCTGGTAGAGAACAAAAGATTAACGGTGTTTTAGATCATACCCCA TGTTTATCTTCCCCTAATTCAGAAACTACAAATAGTGATCAGGGTGAAATTACAGAAAAA ATAGAAAAAAGTCAGATACAGGAACAACCTGATAAAAGTTCCGAGTGTTCTTCTAGCAAG GATGCACAAATTTCAAAAACCTCTTTGAAACCCAAAATCCTCCTTGTAGAAGACAACAAA ATACTTGTGATGGTAACGCGTTCGATGATGAAGCAGTTGGGTCATGACATAGATATAGTG AATAATGGAGTAGAAGCTTTGCGCGCTGTTCAACGCTACAGATATGACCTCATTCTAATG GATGTATGCATGCCAGTCATGGATGGACTTCAAACTACAAGATTGATACGATCATATGAA GAATCTGGTAACTGGGATGCAGCAAAAGATGCTGGCATTGATGTAGAGGTTTCTCCTTCA AATACCTCACAAAGAAGTGATGAATCCTCTACGAAGAGGATTCCTATAATTGCAATGACA GCCAATGCAATATCGGAAAGTGCAGAAGAGTGTTATGCAAATGGTATGGATTCTTTTGTA TCAAAGCCAGTAACACTTCAAAAATTAAAAGAGAGTCTACAACAGTATCTACCATGA

Peptide Sequence

PEP ID	Solyc08g068960.3.1
PEP Infomation	Histidine kinase 5 (AHRD V3.3 *** W9RFB6_9ROSA)
Sequence	MVCEMESDQTEDMEMEVEVLSSMWPEDMNENGKQFNIDWPGEDQDMLEEVNINEDSTIVD FKRLVELTNYSEKGSSQLAYLVKNWEYKQENAVRLLREELDNLSKQQQESELKKLEILEK YQFEEERYGGDKRPISILDEDLKRYIFQEAPRKRNDVKIQDKLEIDAEYDSIKYWKQRAT HLEKLLETSGQREQILTEKLQESIENLERQSSPVEELSQVLKRADNFLHFVLQNAPVVIG HQDNELRYRFIYNHFPSLREEDIIGKTDVEIFTGAGVKESQDFKREVLERGIPAKREITF DTGLFGSKTFLIYVEPVFSKAGETLGVNYMGMEITDQVRKREKMAKLREEIAVQKAKETE LNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMTEILSTTKLDKEQRQLVNVMLSSGD LVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHIAEDVPI EVVGDVLRIRQILTNLISNAIKFTHEGKVGIKLYVVSGPCPDVKQGSHKRMASDHSKVLA KICKEDKCTSPSNNALDRKGSGGCKDADGANERLLQKGEGNYSEQNGASIEDEVDDPNQQ ETTVWIRCDVYDTGIGIPENAIPTLFKKYMQVGADTARKYGGTGLGLAICKQLAELMGGH MTVSSKEHHGSTFTFILPYKVSPVCDSSDDNEELTEMDNHDTSSEGNDDDINSGFFQFQP RTLGSLFSSHSSGRAPKLSPNGFGYNTLNKTNGFQVNSHSFPLDSNTSKETGSVEDACSV ADAVETCSDPESTFKHTRNSGNPSTSGREQKINGVLDHTPCLSSPNSETTNSDQGEITEK IEKSQIQEQPDKSSECSSSKDAQISKTSLKPKILLVEDNKILVMVTRSMMKQLGHDIDIV NNGVEALRAVQRYRYDLILMDVCMPVMDGLQTTRLIRSYEESGNWDAAKDAGIDVEVSPS NTSQRSDESSTKRIPIIAMTANAISESAEECYANGMDSFVSKPVTLQKLKESLQQYLP*

Transcript Sequence

Transcript ID	Solyc08g068960.3.1
Transcript Infomation	Histidine kinase 5 (AHRD V3.3 *** W9RFB6_9ROSA)
Sequence	ATAAAATTCTAGTCCAATTTTCATTTGTTTAAAACAAACTAATTCAAAGTTATTTCGTTT TTATCATAATCGTTTTTATTATCGACTTGAAAAAGATGAATTAAAAAAATTAATATTATT ATAATTTATAATGTTCTTTTTTCTTTTTGCTTTTTTCATTTTATAAAAATGAAATTTGAT TTATTTAGATGAATTGTGGTTACACCCAAAGTTGAAGATGTTTGGTTGTAAATTGATTCT AATCATTGGACAACTCATATTAGTATAAACAAGTCAAACAACAGATAGAAGAGAAACAGA ACTGACTCAAAAAATATAGATATACAGAGCGTGAAATACACTCGCGTAAAAAGCGCGTGA CCTCGTAAAAGGCGGGGAGCAACTCGTCGTCTCCGATTTTTTTTTTTTTTTAAAAAACAA ACAAAAAACAGTGATCCCTTTCTGTCTAATTGACACCAAAAAATAGTAACAAAAAATACT ACTACTACAACTATATTATACTCTCTCACTACCAGCTAAATCATTTCTTCATAAACAATT ACAAAAATAAGAGAGAGAAACCAACTTTTTTTTAGTGAGAGAAAACAGAGTTCTTGAAGT TTTTTCGTACTATGAATGTAACCAGAAAAATTTAAAAAGGGGGCGGGGTTATCACTGTAT AAAAAATTGAAATAAAAATTAAACATAATACGAAGACTTACAAAATGCACATGGCTTCTT GAGTTTGGTCTCCACATATTTTTTGTTTTTCACAAATTAGTATTATTTTTTTCTTTTGCT TTCACATGGTCTCCTTTTACATTCTTCATAATGGTCCAAAGGTTTTGGGTATTATTTTTA TTTTTGACTGAGCACTTTCAAGAGATTCTTTCAGATCTACAGTGAAAAAGGAGAAAGAAC AATGGATGTTGTTGAGAAGTTGAGCTAAAGGATCTCGAATGGTTACGTGTGCCTAGAAAC AGTTTTTCGTTCTTGTTATTGGTGTTGAGGATCTTATTGAAAATTCGATTCAGTTAAGCT CAGATGCGAGAATTGTTGCTTAAGAGCTAAGTATAGTTTGACTTTCTGGTTGTATGTAAG ATAGAATAAGTTGAATATGGTTTGCGAGATGGAAAGTGATCAAACAGAGGACATGGAGAT GGAAGTTGAAGTACTTTCGTCGATGTGGCCTGAAGATATGAATGAAAATGGAAAACAATT CAATATAGATTGGCCAGGAGAAGACCAAGATATGTTGGAGGAGGTTAATATCAATGAGGA TTCCACCATAGTTGATTTCAAGCGCCTTGTGGAGCTTACTAATTATAGCGAAAAAGGGTC ATCTCAGTTGGCTTACTTGGTGAAAAACTGGGAATATAAACAGGAAAATGCTGTAAGGCT ACTTAGAGAAGAGCTTGACAATCTTAGCAAGCAACAACAAGAATCAGAGCTCAAGAAATT GGAGATATTGGAGAAGTATCAATTCGAGGAAGAACGATATGGAGGTGATAAACGTCCAAT ATCTATATTGGATGAAGACTTGAAGAGATACATATTCCAGGAGGCTCCTAGAAAAAGGAA TGATGTGAAAATTCAAGATAAACTAGAAATAGATGCTGAGTATGACAGTATAAAATACTG GAAGCAGAGAGCTACACATTTGGAGAAGTTGTTGGAAACGAGTGGTCAACGGGAGCAAAT ACTAACTGAGAAATTGCAGGAAAGCATAGAAAATCTTGAAAGACAGTCCTCTCCTGTGGA AGAATTATCTCAGGTTCTGAAAAGAGCAGATAATTTCTTACATTTTGTCCTCCAGAATGC ACCAGTTGTCATTGGCCACCAGGACAATGAGTTACGCTATCGTTTTATCTACAATCATTT CCCAAGTTTGCGTGAAGAGGACATCATTGGCAAAACAGATGTAGAGATTTTTACTGGTGC TGGTGTAAAGGAATCTCAAGACTTCAAAAGAGAGGTTTTGGAACGGGGAATACCGGCAAA GAGGGAAATTACGTTTGACACAGGATTATTTGGGTCAAAGACTTTTTTAATATATGTTGA ACCTGTGTTCAGTAAGGCAGGAGAGACCCTTGGTGTAAATTATATGGGAATGGAGATAAC TGATCAGGTAAGGAAAAGAGAAAAAATGGCAAAACTGCGCGAAGAGATAGCTGTACAGAA GGCCAAGGAGACTGAACTTAACAAAACTATTCACATAACAGAGGAAACAATGCGAGCGAA ACAGATGCTTGCAACCATGTCTCATGAGATTAGATCTCCTTTATCAGGAGTTGTCAGCAT GACCGAGATTCTTTCTACTACAAAACTGGACAAGGAACAGCGTCAGCTTGTGAATGTAAT GTTGTCTTCAGGAGATTTGGTTCTTCAACTGATAAATGACATCCTTGATCTGTCCAAAGT CGAATCAGGAGTAATGAAGTTGGAAGCCACAAAATTCCGACCAAGGGAGGTTGTTAAGCA TGTCTTGCAAACTGCAGCAGCATCACTACAGAAAATATTAACATTGGAAGGCCACATTGC TGAAGATGTTCCCATTGAGGTTGTCGGGGATGTATTAAGAATTCGCCAGATTCTCACAAA CTTGATCAGCAATGCTATAAAATTTACTCATGAAGGGAAGGTTGGGATAAAGCTGTATGT GGTTTCCGGGCCATGTCCTGATGTGAAACAAGGATCCCATAAGAGGATGGCTTCTGATCA TTCAAAGGTTTTAGCAAAGATATGTAAGGAAGATAAGTGTACATCACCATCTAACAATGC CCTTGATCGTAAAGGCTCTGGTGGATGCAAAGATGCCGATGGTGCAAATGAGAGATTGTT GCAGAAGGGGGAGGGTAACTATTCAGAACAAAATGGAGCTTCTATAGAAGATGAAGTGGA TGATCCTAATCAACAGGAAACAACTGTGTGGATACGTTGTGATGTTTATGACACGGGGAT TGGAATACCAGAAAATGCTATACCGACTCTATTCAAGAAATATATGCAAGTCGGAGCAGA TACTGCTCGGAAGTATGGTGGGACAGGACTAGGATTGGCAATTTGTAAACAGCTGGCTGA GCTTATGGGAGGTCATATGACTGTATCCAGCAAAGAGCACCATGGATCTACCTTTACATT TATTCTACCTTACAAAGTTTCACCTGTATGCGATAGCTCGGATGATAATGAAGAACTCAC CGAAATGGATAATCATGATACTTCTTCTGAAGGAAATGATGATGATATAAATTCTGGTTT TTTCCAATTCCAACCGCGCACTTTAGGTTCTCTGTTTTCTTCTCATAGTTCTGGAAGAGC CCCAAAACTTTCACCAAACGGTTTTGGGTATAACACTTTGAATAAGACTAATGGATTTCA AGTGAACTCCCATTCTTTCCCTTTGGATAGCAATACATCAAAAGAGACAGGTTCAGTGGA AGATGCATGTTCAGTAGCTGATGCTGTTGAGACATGTTCTGATCCTGAATCTACCTTCAA ACACACCCGAAATTCTGGCAATCCAAGTACGTCTGGTAGAGAACAAAAGATTAACGGTGT TTTAGATCATACCCCATGTTTATCTTCCCCTAATTCAGAAACTACAAATAGTGATCAGGG TGAAATTACAGAAAAAATAGAAAAAAGTCAGATACAGGAACAACCTGATAAAAGTTCCGA GTGTTCTTCTAGCAAGGATGCACAAATTTCAAAAACCTCTTTGAAACCCAAAATCCTCCT TGTAGAAGACAACAAAATACTTGTGATGGTAACGCGTTCGATGATGAAGCAGTTGGGTCA TGACATAGATATAGTGAATAATGGAGTAGAAGCTTTGCGCGCTGTTCAACGCTACAGATA TGACCTCATTCTAATGGATGTATGCATGCCAGTCATGGATGGACTTCAAACTACAAGATT GATACGATCATATGAAGAATCTGGTAACTGGGATGCAGCAAAAGATGCTGGCATTGATGT AGAGGTTTCTCCTTCAAATACCTCACAAAGAAGTGATGAATCCTCTACGAAGAGGATTCC TATAATTGCAATGACAGCCAATGCAATATCGGAAAGTGCAGAAGAGTGTTATGCAAATGG TATGGATTCTTTTGTATCAAAGCCAGTAACACTTCAAAAATTAAAAGAGAGTCTACAACA GTATCTACCATGATTGTAAATGAATGCATCTGTACAGGAATAGAAAAACAAAACAAAAAA CCAAAAAAAAATGTGTTTAGGAAATTTTGTACTTAAGTTGCTGTGCTTCTAGTTGTCTTG TTCAGAATGATGTACATTAATAGTCTACCTTCTGTTCCTCTACTAGTCCTCATAGCAGCA GCAAATCACATATTTGGAACTCATGTATCTGGACTTGCCAAAATGGAAAAGTATTTTTTT ATATGAATTCCATTGAAGAGGGAATAAGTCATGAGAATCATTATTTATCACTTGTGTGAC ATATTTTCAATCAACTCACTCTGTTTACTATCCCGACTTGTTTGAGATTGAAGCGTTGTT GTTTTTCTCACTCCAGTCCATTCCCAAAAAACTAAAATAATGAGCACCTTTGTATTAGTA CTAATCGTAATTACAATCTCTAATCTTACAAGT