Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g068810.3.1
CDS Infomation

Ubiquitin carboxyl-terminal hydrolase, putative (AHRD V3.3 *** B9RNT9_RICCO)
Sequence

ATGTACTCAAGCAACGATTTGTATACAAATCCAAAGCCCTGCAAGCATCTTGCAGAGTAC
AAGGTGAAAAATGGTGTATGTGGGTACAATTTGATTCAAGATTGTTTTAGGACAACTCCA
TATGGTAGGACAACATTGGAGATGTCGAAATTGGAGATACCTAGATGTAGTGTTTGTAGT
GGGTCTCAGGGCAGATTTTATATGTGTTTGATCTGTTCATCAGTGTTTTGTTGTTTGTCA
CCTGAATCAAACCATGCCCTATTGCATATCCAGTCTCAAGATGGACATGAGATTTTAGTA
GATATGGAAAGGGCTGAGCTTTATTGCTCTGTGTGTTGTGATCAGGTGTATGATCCTGAT
TTTGATAAGGCAGTGATGTGTAAACATATCAGGGGGTTTTCAAGAAGTGAAAATGGGGTT
GAGGAGAGTGAGATGAGATTGAGTAAGAGGAGAAAGCTGAGTTTTTGGATGGATTTAGAT
TCAAAGAATATGAAGAGATTGTTTTTTCGTAAGTCGAAATCGTGTTATCCGTTGGGATTA
AGAGGTTTGAACAATTTGGGGAATACTTGTTTCATGAATTCTGTGTTGCAAGTGTTGCTT
CATGCACCCCCTTTGAGAAATTACTTCCTTAGTGATAGACATAACCGAGAAATTTGCAGA
AATATGTCTTCGGATCGATTGTGCCTGCCTTGTGACATTGATCTTATGTTTTCAGCTGTG
TTTTCTGGTGATAGGACCCCTTATAGTCCAGCTCAGTTTCTTTACAGTTGGTGGCAGCAT
TCAGAAAATCATGCTACCTACGAGCAGCAGGATGCTCATGAGTTCTTCATTTCAATGCTG
GACAAGATCCATGACAAAGAGGGGAAAGCAAGTTTGGCAATCAAAGATAATAGAGAGTGC
CAGTGTATTGCTCATAGGGCTTTCTACGGGCTCTTGAGATCTGATGTCACATGTGCATCA
TGCGGTTTCACTTCAACAACTCATGATCCTTGTATGGACGTTTCTCTTGACTTGAGTCCG
TGCAACTCCAGCCGAGTGGATTTTGCTAGCAAGTCCAGTAAGGCAAATGAATCTCTTCTA
GGTTGCTTGGACCTCTTCACAAGACCAGAAAAATTGGGATCCGATCAGAAACTATACTGT
GAAAATTGTCACGAAAAGCAAGATGCTTTGAAACAAATGTCCATCAGAAAACTCCCTCTT
GTTCTCTGCTTTCATATTAAGCGATTTGAACATTCTCCCACCAGAAAAATGTCCAGAAAG
ATCGATCGCCACGTGCAATTTCCTTTCTCTTTGGACATGAAACCATATTTATCATCTTCA
ATCGTAAGAGAAAGATACGGGAGCAGAATCTTTTCGTTTGACGGTGACGAATCAGATGTT
TCTACAGAATTTGAAATTTTTGCAGTGGTCGCACATTCAGGAATGTTGGAATCTGGTCAC
TATGTGACGTATTTGCATTTGATAAACCAATGGTATAAATGTGACGATGCATGGATAACT
GAAGTCGACGAAGAAGTTGTTAGGGCCTCACAGTGCTATCTGATATACTATGTACAGAAG
ATGCTCTACCACAAGAGTTGTGAAGATGTTAGCTGCCAGCCAATGTCACTGCGAGCAGAC
ACATTTGTTCGGATAACTGGTTGCTGCTAG

Peptide Sequence

PEP ID

Solyc08g068810.3.1
PEP Infomation

Ubiquitin carboxyl-terminal hydrolase, putative (AHRD V3.3 *** B9RNT9_RICCO)
Sequence

MYSSNDLYTNPKPCKHLAEYKVKNGVCGYNLIQDCFRTTPYGRTTLEMSKLEIPRCSVCS
GSQGRFYMCLICSSVFCCLSPESNHALLHIQSQDGHEILVDMERAELYCSVCCDQVYDPD
FDKAVMCKHIRGFSRSENGVEESEMRLSKRRKLSFWMDLDSKNMKRLFFRKSKSCYPLGL
RGLNNLGNTCFMNSVLQVLLHAPPLRNYFLSDRHNREICRNMSSDRLCLPCDIDLMFSAV
FSGDRTPYSPAQFLYSWWQHSENHATYEQQDAHEFFISMLDKIHDKEGKASLAIKDNREC
QCIAHRAFYGLLRSDVTCASCGFTSTTHDPCMDVSLDLSPCNSSRVDFASKSSKANESLL
GCLDLFTRPEKLGSDQKLYCENCHEKQDALKQMSIRKLPLVLCFHIKRFEHSPTRKMSRK
IDRHVQFPFSLDMKPYLSSSIVRERYGSRIFSFDGDESDVSTEFEIFAVVAHSGMLESGH
YVTYLHLINQWYKCDDAWITEVDEEVVRASQCYLIYYVQKMLYHKSCEDVSCQPMSLRAD
TFVRITGCC*

Transcript Sequence

Transcript ID

Solyc08g068810.3.1
Transcript Infomation

Ubiquitin carboxyl-terminal hydrolase, putative (AHRD V3.3 *** B9RNT9_RICCO)
Sequence

TTTGTTTTGGGTGTTTACCAAAATTTCATTTTGACGCTTAATCAAGATTCAAGGTTAGTA
TGTACTCAAGCAACGATTTGTATACAAATCCAAAGCCCTGCAAGCATCTTGCAGAGTACA
AGGTGAAAAATGGTGTATGTGGGTACAATTTGATTCAAGATTGTTTTAGGACAACTCCAT
ATGGTAGGACAACATTGGAGATGTCGAAATTGGAGATACCTAGATGTAGTGTTTGTAGTG
GGTCTCAGGGCAGATTTTATATGTGTTTGATCTGTTCATCAGTGTTTTGTTGTTTGTCAC
CTGAATCAAACCATGCCCTATTGCATATCCAGTCTCAAGATGGACATGAGATTTTAGTAG
ATATGGAAAGGGCTGAGCTTTATTGCTCTGTGTGTTGTGATCAGGTGTATGATCCTGATT
TTGATAAGGCAGTGATGTGTAAACATATCAGGGGGTTTTCAAGAAGTGAAAATGGGGTTG
AGGAGAGTGAGATGAGATTGAGTAAGAGGAGAAAGCTGAGTTTTTGGATGGATTTAGATT
CAAAGAATATGAAGAGATTGTTTTTTCGTAAGTCGAAATCGTGTTATCCGTTGGGATTAA
GAGGTTTGAACAATTTGGGGAATACTTGTTTCATGAATTCTGTGTTGCAAGTGTTGCTTC
ATGCACCCCCTTTGAGAAATTACTTCCTTAGTGATAGACATAACCGAGAAATTTGCAGAA
ATATGTCTTCGGATCGATTGTGCCTGCCTTGTGACATTGATCTTATGTTTTCAGCTGTGT
TTTCTGGTGATAGGACCCCTTATAGTCCAGCTCAGTTTCTTTACAGTTGGTGGCAGCATT
CAGAAAATCATGCTACCTACGAGCAGCAGGATGCTCATGAGTTCTTCATTTCAATGCTGG
ACAAGATCCATGACAAAGAGGGGAAAGCAAGTTTGGCAATCAAAGATAATAGAGAGTGCC
AGTGTATTGCTCATAGGGCTTTCTACGGGCTCTTGAGATCTGATGTCACATGTGCATCAT
GCGGTTTCACTTCAACAACTCATGATCCTTGTATGGACGTTTCTCTTGACTTGAGTCCGT
GCAACTCCAGCCGAGTGGATTTTGCTAGCAAGTCCAGTAAGGCAAATGAATCTCTTCTAG
GTTGCTTGGACCTCTTCACAAGACCAGAAAAATTGGGATCCGATCAGAAACTATACTGTG
AAAATTGTCACGAAAAGCAAGATGCTTTGAAACAAATGTCCATCAGAAAACTCCCTCTTG
TTCTCTGCTTTCATATTAAGCGATTTGAACATTCTCCCACCAGAAAAATGTCCAGAAAGA
TCGATCGCCACGTGCAATTTCCTTTCTCTTTGGACATGAAACCATATTTATCATCTTCAA
TCGTAAGAGAAAGATACGGGAGCAGAATCTTTTCGTTTGACGGTGACGAATCAGATGTTT
CTACAGAATTTGAAATTTTTGCAGTGGTCGCACATTCAGGAATGTTGGAATCTGGTCACT
ATGTGACGTATTTGCATTTGATAAACCAATGGTATAAATGTGACGATGCATGGATAACTG
AAGTCGACGAAGAAGTTGTTAGGGCCTCACAGTGCTATCTGATATACTATGTACAGAAGA
TGCTCTACCACAAGAGTTGTGAAGATGTTAGCTGCCAGCCAATGTCACTGCGAGCAGACA
CATTTGTTCGGATAACTGGTTGCTGCTAGAATTTCAACGTTTGTGCGCTTGACTTGAATA
GATCTTCTGCATTATTCTGTCCAGCCAGGTTATATTATTCGGGGGCCAAGAACTATGATG
GTAAGTCTTGGGGACTCTCCACCAGCCAAAGCATTCCCGTTTAGAGGGATGACACTGAAA
AATTATATGATAAGATGACTCAAAATTTGTATTTCGAGATAGAAAGCTGTTAACATGTGA
AAGTTCTTATAAAGATGGAACCAACACTAGTTTTCCATTTTAGGCCTTTACAAGGAACCT
TATGAATGTACAGTAACTTAACAATCTGAAAGGGAATCTTTTGTTTGGTT