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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g068640.4.1
CDS Infomation

Decarboxylase family protein IPR002129 Pyridoxal phosphate-dependent decarboxylase
Sequence

ATGGAGCCTGGATTGAAAAATGATGGTCCTTCCTTGGACACTATCTTGGTCAATTATTTG
GACACACTTACACAACGAGTCAATTATCATTTAGGTTATCCAGTCAACATATGTTATGAT
CACTATGCAACGCTAGCACCACTTTTGCAGTTTCACCTAAACAATTGTGGTGATCCTTTC
CTACAAAATACTGTCGATTTCCATTCTAAAGACTTTGAAGTGGCTGTTTTGAATTGGTTT
GCAAAACTTTGGGAAATTGAAAAGGATCAATATTGGGGATATGTTACCAATGGTGGCACC
GAAGGCAATCTCCATGGTATTTTGTTAGGGAGAGAGCTACTTCCTGATGGGATATTATAT
GTATCAAAAGATTCTCATTACTCAGTATTCAAAGCTGCAAGAATGTATAGAATGGATTCA
GAAACAATAAACACATCAGTGAATGGGGAGATGGATTATTCAGATTTAAGAGCAAAATTG
CTTCAAAATAAGGACAAACCAGCAATTATAAACGTCACAATTGGAACTACCTTCAAAGGT
GCTATTGATGATGTTAATATTATTCTTGAAACACTCAAAGAATGTGGCTATTCACAAGAT
AGGTTTTACATCCACTGTGATGCTGCACTATGTGGTCTTATGACCCCTTTTATAAACAAT
ATGATTAGTTTCAAGAAGTCAATTGGAAGTGTCACAATTTCTGGTCACAAGTTCTTAGGA
TGCCCAATGCCTTGTGGTGTCCAAATAACAAGAAAAAGCTACATCAATAATCTCTCAACA
AATGTGGAATACATTGCTTCTGTCGATGCCACTATTTCTGGTAGCCGTAATGGTTTAACT
CCAATTTTCTTATGGTATAGCTTGAGCGCAAAAGGTCAAGTTGGACTTCAAAAGGATGTT
AAAAGATGTCTCGACAATGCCAAATATTTGAAAGATCGTCTTCAACAAGCAGGGATAAGT
GTCATGCTGAATGAGCTTAGCATCATAGTTGTACTTGAAAGGCCTCGTGACCATGAATTT
GTGCGTCGATGGCAACTTTCATGCGTCAAGGATATGGCACATGTTATTGTAATGCCAGGC
ATCACACGAGAAATGCTTGACAACTTCCTGAGTGAACTAGTGCAACAAAGAAAAGCATGG
TATCAAAATGGAAAGACCAATCCTCCTTGTGTTGGAGAAGATATTGTTGCATGCTCTTAT
CATAAGATTGATTACATTAGTACTCCATAG

Peptide Sequence

PEP ID

Solyc08g068640.4.1
PEP Infomation

Decarboxylase family protein IPR002129 Pyridoxal phosphate-dependent decarboxylase
Sequence

MEPGLKNDGPSLDTILVNYLDTLTQRVNYHLGYPVNICYDHYATLAPLLQFHLNNCGDPF
LQNTVDFHSKDFEVAVLNWFAKLWEIEKDQYWGYVTNGGTEGNLHGILLGRELLPDGILY
VSKDSHYSVFKAARMYRMDSETINTSVNGEMDYSDLRAKLLQNKDKPAIINVTIGTTFKG
AIDDVNIILETLKECGYSQDRFYIHCDAALCGLMTPFINNMISFKKSIGSVTISGHKFLG
CPMPCGVQITRKSYINNLSTNVEYIASVDATISGSRNGLTPIFLWYSLSAKGQVGLQKDV
KRCLDNAKYLKDRLQQAGISVMLNELSIIVVLERPRDHEFVRRWQLSCVKDMAHVIVMPG
ITREMLDNFLSELVQQRKAWYQNGKTNPPCVGEDIVACSYHKIDYISTP*

Transcript Sequence

Transcript ID

Solyc08g068640.4.1
Transcript Infomation

Decarboxylase family protein IPR002129 Pyridoxal phosphate-dependent decarboxylase
Sequence

AACATACGAACAAAATGTACTCAATAATTTTTATACTAAGTAAACAAAAACAACATTTGT
GTTTTACGAGAATGGCTACTCTCTCACTTGAAATGGAATTCGAACCATTAGCCTTAACAC
CAAGAGGTTTAGCGCGGCGAATTAGTTTGTTTCCGAATGGGGACAACAAGAAACAGAAAA
TGGCACAACCAGGTGCAGGACCAGGAAGAACTTGCAACTTGAGGTGATGGAGCCTGGATT
GAAAAATGATGGTCCTTCCTTGGACACTATCTTGGTCAATTATTTGGACACACTTACACA
ACGAGTCAATTATCATTTAGGTTATCCAGTCAACATATGTTATGATCACTATGCAACGCT
AGCACCACTTTTGCAGTTTCACCTAAACAATTGTGGTGATCCTTTCCTACAAAATACTGT
CGATTTCCATTCTAAAGACTTTGAAGTGGCTGTTTTGAATTGGTTTGCAAAACTTTGGGA
AATTGAAAAGGATCAATATTGGGGATATGTTACCAATGGTGGCACCGAAGGCAATCTCCA
TGGTATTTTGTTAGGGAGAGAGCTACTTCCTGATGGGATATTATATGTATCAAAAGATTC
TCATTACTCAGTATTCAAAGCTGCAAGAATGTATAGAATGGATTCAGAAACAATAAACAC
ATCAGTGAATGGGGAGATGGATTATTCAGATTTAAGAGCAAAATTGCTTCAAAATAAGGA
CAAACCAGCAATTATAAACGTCACAATTGGAACTACCTTCAAAGGTGCTATTGATGATGT
TAATATTATTCTTGAAACACTCAAAGAATGTGGCTATTCACAAGATAGGTTTTACATCCA
CTGTGATGCTGCACTATGTGGTCTTATGACCCCTTTTATAAACAATATGATTAGTTTCAA
GAAGTCAATTGGAAGTGTCACAATTTCTGGTCACAAGTTCTTAGGATGCCCAATGCCTTG
TGGTGTCCAAATAACAAGAAAAAGCTACATCAATAATCTCTCAACAAATGTGGAATACAT
TGCTTCTGTCGATGCCACTATTTCTGGTAGCCGTAATGGTTTAACTCCAATTTTCTTATG
GTATAGCTTGAGCGCAAAAGGTCAAGTTGGACTTCAAAAGGATGTTAAAAGATGTCTCGA
CAATGCCAAATATTTGAAAGATCGTCTTCAACAAGCAGGGATAAGTGTCATGCTGAATGA
GCTTAGCATCATAGTTGTACTTGAAAGGCCTCGTGACCATGAATTTGTGCGTCGATGGCA
ACTTTCATGCGTCAAGGATATGGCACATGTTATTGTAATGCCAGGCATCACACGAGAAAT
GCTTGACAACTTCCTGAGTGAACTAGTGCAACAAAGAAAAGCATGGTATCAAAATGGAAA
GACCAATCCTCCTTGTGTTGGAGAAGATATTGTTGCATGCTCTTATCATAAGATTGATTA
CATTAGTACTCCATAGAAGGCACAGAAGATAAGATCATCCAGTTATTTAATTTATTGCAA
AGAAATGGCATTTTTTAACTCTTGTTACTTCATTCTTTTATTTACAATATTGAAATTCAA
TTGTATACATGATATATTGTACTATTG