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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g068620.2.1
CDS Infomation

Decarboxylase family protein IPR002129 Pyridoxal phosphate-dependent decarboxylase
Sequence

TACAACAACATTGTATACCGTCAGCGAGACCCCCGTCCTTTCTGTTTGTAGCGGGTCCGA
TTCAAGGCATTCAACACTTTCCTTCAAAACACTGTTGATTTCCATTCTAAAGACTTTGAA
GTGGCTGTTTTGGATTGGTTTGCACAACTTTGGGGAATTGAAAAGGATCAATATTGGGGA
TATGTTACCAATGGTGGCACTGAAGGCAATCTCCATGGTATTTTGTTAGGGAGAGAGTTA
CTTCCTGAAGGAATATTATATGCATCAAAAGACTCTCATTACTCAGTATTCAAAGCTGCA
AGAATGTATAGAATGGATTCAGAAACAATCAACACATCAGTAAATGGAGAGATGGATTAT
TCAGATTTAAGAGCAAAGTTACTTCAAAATAAGGATAAACCAGCTATTATAAATGTCACA
ATTGGAACTACGTTCAAAGGAGCTATTGATGATGTTGACGTTATTCTTGAAACACTCAAA
GAATGTGGCTATTCACAAGATCGATTTTACATCCACTGTGATGCTGCACTATGTGGTCTT
ATGACCCCTTTTATAAACAATATGATTAGTTTCAAGAAGCCAATTGGAAGTGTCACAATT
TCTGGTCACAAGTTCTTAGGATGCCCAATGCCTTGTGGTGTCCAAATAACAAGAAAAAGC
TACATCAATAATCTCTCAACAAATGTGGAATACATTGCTTCTGTGGATGCCACGATTTCT
GGTAGCCGTAACGGTTTAACTCTAATTTTCTTATGGTACAGCTTGAGCGCAAAAGGTCAA
GTTGGACTTCAAAAGGATGTTAAAAGATGTCTCGACAATGCCAAATATTTGAAAGATCGT
CTTCAACAAGCAGGGATAAGTGTCATGCTGAATGAGCTAAGCATCATAGTTGTACTTGAA
AGGCCTCGTGACCATGAATTTGTGCGTCGTTGGCAACTCTCATGCGTCAAGGATATGGCA
CATGTTATTGTAATGCCAGGCATCACACGAGAAATGCTTGACAACTTCATGAGTGAATTA
GTGCAACAAAGAAAAGTATGGTATCAAAATGGAAAGACTAATCCTCCTTGTGTTGGAGAG
GATATTGGTGCTCAAAATTGTGCATGCTCTTACCATAAGATTGACTTCATTACTCCTTAG

Peptide Sequence

PEP ID

Solyc08g068620.2.1
PEP Infomation

Decarboxylase family protein IPR002129 Pyridoxal phosphate-dependent decarboxylase
Sequence

YNNIVYRQRDPRPFCL*RVRFKAFNTFLQNTVDFHSKDFEVAVLDWFAQLWGIEKDQYWG
YVTNGGTEGNLHGILLGRELLPEGILYASKDSHYSVFKAARMYRMDSETINTSVNGEMDY
SDLRAKLLQNKDKPAIINVTIGTTFKGAIDDVDVILETLKECGYSQDRFYIHCDAALCGL
MTPFINNMISFKKPIGSVTISGHKFLGCPMPCGVQITRKSYINNLSTNVEYIASVDATIS
GSRNGLTLIFLWYSLSAKGQVGLQKDVKRCLDNAKYLKDRLQQAGISVMLNELSIIVVLE
RPRDHEFVRRWQLSCVKDMAHVIVMPGITREMLDNFMSELVQQRKVWYQNGKTNPPCVGE
DIGAQNCACSYHKIDFITP*

Transcript Sequence

Transcript ID

Solyc08g068620.2.1
Transcript Infomation

Decarboxylase family protein IPR002129 Pyridoxal phosphate-dependent decarboxylase
Sequence

TACAACAACATTGTATACCGTCAGCGAGACCCCCGTCCTTTCTGTTTGTAGCGGGTCCGA
TTCAAGGCATTCAACACTTTCCTTCAAAACACTGTTGATTTCCATTCTAAAGACTTTGAA
GTGGCTGTTTTGGATTGGTTTGCACAACTTTGGGGAATTGAAAAGGATCAATATTGGGGA
TATGTTACCAATGGTGGCACTGAAGGCAATCTCCATGGTATTTTGTTAGGGAGAGAGTTA
CTTCCTGAAGGAATATTATATGCATCAAAAGACTCTCATTACTCAGTATTCAAAGCTGCA
AGAATGTATAGAATGGATTCAGAAACAATCAACACATCAGTAAATGGAGAGATGGATTAT
TCAGATTTAAGAGCAAAGTTACTTCAAAATAAGGATAAACCAGCTATTATAAATGTCACA
ATTGGAACTACGTTCAAAGGAGCTATTGATGATGTTGACGTTATTCTTGAAACACTCAAA
GAATGTGGCTATTCACAAGATCGATTTTACATCCACTGTGATGCTGCACTATGTGGTCTT
ATGACCCCTTTTATAAACAATATGATTAGTTTCAAGAAGCCAATTGGAAGTGTCACAATT
TCTGGTCACAAGTTCTTAGGATGCCCAATGCCTTGTGGTGTCCAAATAACAAGAAAAAGC
TACATCAATAATCTCTCAACAAATGTGGAATACATTGCTTCTGTGGATGCCACGATTTCT
GGTAGCCGTAACGGTTTAACTCTAATTTTCTTATGGTACAGCTTGAGCGCAAAAGGTCAA
GTTGGACTTCAAAAGGATGTTAAAAGATGTCTCGACAATGCCAAATATTTGAAAGATCGT
CTTCAACAAGCAGGGATAAGTGTCATGCTGAATGAGCTAAGCATCATAGTTGTACTTGAA
AGGCCTCGTGACCATGAATTTGTGCGTCGTTGGCAACTCTCATGCGTCAAGGATATGGCA
CATGTTATTGTAATGCCAGGCATCACACGAGAAATGCTTGACAACTTCATGAGTGAATTA
GTGCAACAAAGAAAAGTATGGTATCAAAATGGAAAGACTAATCCTCCTTGTGTTGGAGAG
GATATTGGTGCTCAAAATTGTGCATGCTCTTACCATAAGATTGACTTCATTACTCCTTAG
AAGGCAAAGAAATGAGAGACGACCTTTGTTGCCGTTAGTATGTTTTCCATTGAGATGCCA
TTTTGTAACTCTTATTAATTCTTTCATTTGTTAGAACCATTG