Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g068570.3.1
CDS Infomation

Tocopherol cyclase (AHRD V3.3 *** F1BPV7_SOLPN)
Sequence

ATGGAGTGTGTTTCCGCCATTTCTCCAATTTCGAAAAATGGTGGATTTTGTAGAATTAGG
ACCCATTTTGCAACTTCAATTGCAAATGGGGAAGTTTTGTTGAACAATTATTCATCTGCT
GTTCTGAAGTTGCAGTCTCAAAAATCAAGACATGCATTTGTAGTTAAAGCTGATTCAGCT
GTTGACACAACAAAGAAGGAAAACAGGGAGCCTGTGAAACCGGTTTACTCTTCTACGCCT
TCTAATCGTCCTCTTCGAACTCCTCATAGCGGGTATCATTTTGATGGAAGTACCAGAAAA
TTCTTTGAAGGTTGGTTCTTTAAAGTATCAATTCCAGAGTGCAGACAGAGTTTCTGCTTC
ATGTATTCTGTTGAAAGTCCTTCATTTACCAAGAAATTAAGCAGCTTGGAGGAGCTGCAG
TACGGGCCTCGGTTTACTGGCGTGGGAGCTCAAATTCTTGGTGCTGATGACAAGTATATT
TGTCAATATAGTGAAGAGTCTTCAAACTTCTGGGGAAGTAGGCATGAACTGATGCTTGGC
AACACCTTTGTTGCCCAAAATAGTGCTAAGCCTCCAAATAAGGAAGTTAGCCCTCAGGAG
TTCAATCGTTGCGTCACAGAGGGTTTTCAAGTTACCCCACTTTGGCATCAAGGATCTATT
CGCGATGACGGGAGGACAGATTATACTGAAATTGTGAAAACTGCTAGCTGGGAGTATAGC
ACGCGGCCCATTTATGGATGGGGCGATGTTAACTCAAAGCAGAAGTCCACGGCAGGATGG
CCTGCTGCTTTTCCTGTATTTGAGCCACATTGGCAAGTTTGCATGGCAGCTGGACTTTCA
ACAGGCTGGATAGAGTGGGATGGTCAGCGGTTTGAGTTTCAAAATGCCCCTTCTTACTCC
GAAAAGAACTGGGGTGGTTCCTTCCCAAGAAAGTGGTTTTGGGTCCAGTGCAGTGTATTT
GAAGGTGCAATTGGAGATGTTGCTTTGACTGCTGGTGGTGGACTAAGGCTACTTCCGGGA
TTGAATGAGACTTTTGAAAGTGTTGCTCTGATAGGAATTCACTATAGAGGTATCTTCTAT
GAATTTGTTCCATGGAATGCTAGTGTTAGTTGGGAAATTACTCCCTGGGGTAAATGGCAT
ATATCTGCGGAGAATGAGACACATATGGTATTACTAGAAGCAACAGCAGAAGATCCTGGT
ACCACGTTGCGGGCTCCTACGGAAGAGATGGGTCTCGCTCCTGCATGTAGAGACACTTGT
TTCGGTGAGCTAAGACTGCAGTTGTGGGAACGGAAGAGTAATGGGAGTAAAGGAAAGGTT
ATTTTGGATGTTACAAGCAATATGGCAGGTCTTGAAGTTGGGGGAGGACCATGGTTCAAC
ACATGGAAGGGAAACGCAGAGATGCCGGAAATTGTTACTCGAGCTATCAATGTTCCTGTG
GATTTGGATGGCATATTCAGCTGTGTTCCTTCACTTCTCAAACCTCCTGGCCTTTGA

Peptide Sequence

PEP ID

Solyc08g068570.3.1
PEP Infomation

Tocopherol cyclase (AHRD V3.3 *** F1BPV7_SOLPN)
Sequence

MECVSAISPISKNGGFCRIRTHFATSIANGEVLLNNYSSAVLKLQSQKSRHAFVVKADSA
VDTTKKENREPVKPVYSSTPSNRPLRTPHSGYHFDGSTRKFFEGWFFKVSIPECRQSFCF
MYSVESPSFTKKLSSLEELQYGPRFTGVGAQILGADDKYICQYSEESSNFWGSRHELMLG
NTFVAQNSAKPPNKEVSPQEFNRCVTEGFQVTPLWHQGSIRDDGRTDYTEIVKTASWEYS
TRPIYGWGDVNSKQKSTAGWPAAFPVFEPHWQVCMAAGLSTGWIEWDGQRFEFQNAPSYS
EKNWGGSFPRKWFWVQCSVFEGAIGDVALTAGGGLRLLPGLNETFESVALIGIHYRGIFY
EFVPWNASVSWEITPWGKWHISAENETHMVLLEATAEDPGTTLRAPTEEMGLAPACRDTC
FGELRLQLWERKSNGSKGKVILDVTSNMAGLEVGGGPWFNTWKGNAEMPEIVTRAINVPV
DLDGIFSCVPSLLKPPGL*

Transcript Sequence

Transcript ID

Solyc08g068570.3.1
Transcript Infomation

Tocopherol cyclase (AHRD V3.3 *** F1BPV7_SOLPN)
Sequence

TAAAAGAGGGAGTATTGTACTGTGGCAGACAGTTGCCGCTTTCACTTCACCTCAAAAACT
CTAAAAATCCCACCTTTGATCCAAAATCAACCATGGAGTGTGTTTCCGCCATTTCTCCAA
TTTCGAAAAATGGTGGATTTTGTAGAATTAGGACCCATTTTGCAACTTCAATTGCAAATG
GGGAAGTTTTGTTGAACAATTATTCATCTGCTGTTCTGAAGTTGCAGTCTCAAAAATCAA
GACATGCATTTGTAGTTAAAGCTGATTCAGCTGTTGACACAACAAAGAAGGAAAACAGGG
AGCCTGTGAAACCGGTTTACTCTTCTACGCCTTCTAATCGTCCTCTTCGAACTCCTCATA
GCGGGTATCATTTTGATGGAAGTACCAGAAAATTCTTTGAAGGTTGGTTCTTTAAAGTAT
CAATTCCAGAGTGCAGACAGAGTTTCTGCTTCATGTATTCTGTTGAAAGTCCTTCATTTA
CCAAGAAATTAAGCAGCTTGGAGGAGCTGCAGTACGGGCCTCGGTTTACTGGCGTGGGAG
CTCAAATTCTTGGTGCTGATGACAAGTATATTTGTCAATATAGTGAAGAGTCTTCAAACT
TCTGGGGAAGTAGGCATGAACTGATGCTTGGCAACACCTTTGTTGCCCAAAATAGTGCTA
AGCCTCCAAATAAGGAAGTTAGCCCTCAGGAGTTCAATCGTTGCGTCACAGAGGGTTTTC
AAGTTACCCCACTTTGGCATCAAGGATCTATTCGCGATGACGGGAGGACAGATTATACTG
AAATTGTGAAAACTGCTAGCTGGGAGTATAGCACGCGGCCCATTTATGGATGGGGCGATG
TTAACTCAAAGCAGAAGTCCACGGCAGGATGGCCTGCTGCTTTTCCTGTATTTGAGCCAC
ATTGGCAAGTTTGCATGGCAGCTGGACTTTCAACAGGCTGGATAGAGTGGGATGGTCAGC
GGTTTGAGTTTCAAAATGCCCCTTCTTACTCCGAAAAGAACTGGGGTGGTTCCTTCCCAA
GAAAGTGGTTTTGGGTCCAGTGCAGTGTATTTGAAGGTGCAATTGGAGATGTTGCTTTGA
CTGCTGGTGGTGGACTAAGGCTACTTCCGGGATTGAATGAGACTTTTGAAAGTGTTGCTC
TGATAGGAATTCACTATAGAGGTATCTTCTATGAATTTGTTCCATGGAATGCTAGTGTTA
GTTGGGAAATTACTCCCTGGGGTAAATGGCATATATCTGCGGAGAATGAGACACATATGG
TATTACTAGAAGCAACAGCAGAAGATCCTGGTACCACGTTGCGGGCTCCTACGGAAGAGA
TGGGTCTCGCTCCTGCATGTAGAGACACTTGTTTCGGTGAGCTAAGACTGCAGTTGTGGG
AACGGAAGAGTAATGGGAGTAAAGGAAAGGTTATTTTGGATGTTACAAGCAATATGGCAG
GTCTTGAAGTTGGGGGAGGACCATGGTTCAACACATGGAAGGGAAACGCAGAGATGCCGG
AAATTGTTACTCGAGCTATCAATGTTCCTGTGGATTTGGATGGCATATTCAGCTGTGTTC
CTTCACTTCTCAAACCTCCTGGCCTTTGAGCAAAATGCAAAAACTAGTTATAGAATGAGA
ATCATTATACTTGATTACATTTTGTAAATAGCGTCATCTTGCCTATTGACTTGTCTCAGG
TTGCACCTAACAGTATTTCTATGGAAAATCTTTTTGGTTGGAGTAGAAAATTGTTTTGTT
AATTCCCGTGAAGGAAAACCTAGTAAGGGTCAACGCAAGGATCTTATTTCAAAGTAATCT
CTAGAGTTAAATAGGATTTTATATTGAGCTTCAAACATATGCTATTCCCTCAAAGTCAAA
GAAACGTGGAATTTTATTTTATTTCTTGAAGCACTTGGGACATAAAAGTGATTACATATT
TCAACATACTAGTGTAATTCCACATGTGACATCTCATTTTGGTTCAATTTTTAAGATTAA
AATTTGATTTTTGATGGAAGACAAATCTGGTAAGTTGAGTGCTGCATTACATAAACAAAA
TTTATCAAATTTATTTGATGAACAAATTGTCAATCCACTTAACTAAATGGTAAGGACCTA
AACTCTAAAAGTAGCTGAATTCTACCATGAAAAAGAGAAGCAAAAGCATCAAGACTTTTA
ATCATTCTCTTGTGCCTTTTGGGTTCAAAGAACTGTGGAACAATCCTGTTTTTTTCTTTT
TTTCATCAGCTCGGACAAGCATAGCCTTCCTCCAATGGTTCTACCGGTACAGCATATGGT
GAAGTCCAGTCAGCATTGAAGATTTCTTGAAGTTGTGAAACAATGGCAGGTTGATATGTC
CCAAAGCTAACGCCTGCTGTGGTGTAAAAGTAGTCCCACACCAGGTTGCTGGTGCTTACG
TGTGCACGCACATCACTAACTGCATATTTACCATGATTAACCCGTGTATAGCCAGGATAC
ATATTCCCAGTGGCAGCACCATTAAGTACTGCAGGTCCAGTTGAATTGTATCCTGGAACA
ATGTAATATTTGATCTCAACTTTACCAGAACAGTGGTTGTACTTTGAAGAAGAGCATAGG
GTGTTGGAGTAAAGAAGGGACTTCAGATACTGGTCAGTATTGTTTATAA