Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g068530.3.1
CDS Infomation

F-box/RNI/FBD-like domain protein (AHRD V3.3 *** G7IHX4_MEDTR)
Sequence

ATGCCGAAGAGAAGAAGGTATTACAGACGTAAAAAAAACCCAAAACAACAAAGAAATTCG
GTGGACAGAATTTCCAATTTGCCAATTGAAATCATCCGTGAAATTCACTTTCGCCTTCCA
CGGATCGATGCAGTCAAAACTAGTATTTTGTCCAAAAAATGGCAAAGCATTTGGGCTTCT
CATCCTAGAATTTTTTTGGACGAAATTGATTTTGGTGCCGACTATTCACGATACAGTGTT
GCAGATAAACCTAAAAGAGATTCCTTCTTAACTTACTTGATAAAGTCCTTAGAAATCCGT
CAGAAGCCCTCTGAATACAATTGTGATGTCGACAAACTCTGTCTTCGAATGACAGTTGAA
AATTCTCCTGCTGAACTGCTCGTAAACAAGTGGATTTCTTTTGCCTTGGAAAATAGCATT
AAAAGGTTATGTCTCAGTTTAAAAACGATTAATCGTGATCATTACTATCTGTGTGGTTTT
GCATTTTGCGCTCATACATTAGTTCATTTAATTATATCGGATTGTGAGATCACAAATTGT
TCCTTTAAGCTTCCTGCTCTTAAAGTACTCTTTCTATTTGTTGTTTGCATTGAGGATGAT
GATTTTAAGGATCTCATTGCTGGATGCCCACTAATTGAACAGTTACGCATTCAGGACACT
AAAAAGTTGCGTACTATTGTAGTTTCAAATCCTAATCTGGAATTTTTCGGAGTGCATCTT
CTTTGTTCTGATGGTAAAATACGTGTCGAGTCCCCAAATCTTCATTCGATTGAATTTATT
TCATTCAGCATAGACATGTGTGAAGTAGAGATTGCGTCCACGACAACAGTACGAGAGTTG
ACGTTGCGAGATGCTTATGACCCAGAAACATTGATACATTTTATAGAAAAGTTCCCTCTA
CTTGAGAAACTTATCATAGATGGTTACAGTGACTTATGTGAAGTTGAGATTACTTCCAAA
CCAACAGTGCGGAGTTTGACGTTGTGTAATATTAATGATGAAGATTTGACATTGTTTGAT
TGGGATGGCGATGATTTAAAAATGACATGGATGAATTTTATAGACAATTTCCCTCTACTT
GAGAAACTCATCATAGATACTTGCAGTAGGTTGCAAAAACTTCATATTTCTCAACCGAAT
TTGGTTAGCTTGGTGCTGAAGGATAGCATTGTGAAATGGGAGGCAAGAATAAATTCGCCC
AAGTTGAAATCATTTGAGTATAAGGGTGGCCTCACAGATTTTACAGGCATAGAAGATTTA
CAAGAATTGGAATTCGTTCTGTTATATTTAGATCCCCTTAAGCTTCGTGATTACTACTAC
AGTTGGTTTAGAGATATGTTGGAGTCGTGTGCTCGCTCCAAGCATTTGAGTTTGATCTGC
GATATTGAAGAGGTTGTCCTCATTCCTGTTGAGGTAACTGATATATTACCAGTAAATGAT
ATCACGAATCTGGAGTTAGAAATTATTTCACGTCATGGTACTTTTGAAGGGGTTATAGAT
GATTTCACTTGGATTCTTCCAGATTTGAAGACTTTGTCATTGACTTTGGGTTCCACCACA
AAGTTCTTCCAGTTTCGTAGAGAGGAGGATGGTGAGCTCTCAGCAGAAGAAGTACACAAA
CCAAAACCTGATAAGAGCGTATCCATTCTAAGAAATAACAATAAGTCATTTCTCAACATT
CCAGAAATTGATGAAGTTGGAATGATAACAGGGGAAGGACAAGATAGAATTTCCAGTTTG
CCTATCGAAAATATCCGCCAAATCCTCTGA

Peptide Sequence

PEP ID

Solyc08g068530.3.1
PEP Infomation

F-box/RNI/FBD-like domain protein (AHRD V3.3 *** G7IHX4_MEDTR)
Sequence

MPKRRRYYRRKKNPKQQRNSVDRISNLPIEIIREIHFRLPRIDAVKTSILSKKWQSIWAS
HPRIFLDEIDFGADYSRYSVADKPKRDSFLTYLIKSLEIRQKPSEYNCDVDKLCLRMTVE
NSPAELLVNKWISFALENSIKRLCLSLKTINRDHYYLCGFAFCAHTLVHLIISDCEITNC
SFKLPALKVLFLFVVCIEDDDFKDLIAGCPLIEQLRIQDTKKLRTIVVSNPNLEFFGVHL
LCSDGKIRVESPNLHSIEFISFSIDMCEVEIASTTTVRELTLRDAYDPETLIHFIEKFPL
LEKLIIDGYSDLCEVEITSKPTVRSLTLCNINDEDLTLFDWDGDDLKMTWMNFIDNFPLL
EKLIIDTCSRLQKLHISQPNLVSLVLKDSIVKWEARINSPKLKSFEYKGGLTDFTGIEDL
QELEFVLLYLDPLKLRDYYYSWFRDMLESCARSKHLSLICDIEEVVLIPVEVTDILPVND
ITNLELEIISRHGTFEGVIDDFTWILPDLKTLSLTLGSTTKFFQFRREEDGELSAEEVHK
PKPDKSVSILRNNNKSFLNIPEIDEVGMITGEGQDRISSLPIENIRQIL*

Transcript Sequence

Transcript ID

Solyc08g068530.3.1
Transcript Infomation

F-box/RNI/FBD-like domain protein (AHRD V3.3 *** G7IHX4_MEDTR)
Sequence

GTAAATATAGAACATATAACCAAGAACATTTGTCATCTTCCTAAACCTAAAAGTTTAGCA
TTTTAACTTCTTCTGGTTCATCTAATTTGTTTCACCTCCGTCTGAAAATGCCGAAGAGAA
GAAGGTATTACAGACGTAAAAAAAACCCAAAACAACAAAGAAATTCGGTGGACAGAATTT
CCAATTTGCCAATTGAAATCATCCGTGAAATTCACTTTCGCCTTCCACGGATCGATGCAG
TCAAAACTAGTATTTTGTCCAAAAAATGGCAAAGCATTTGGGCTTCTCATCCTAGAATTT
TTTTGGACGAAATTGATTTTGGTGCCGACTATTCACGATACAGTGTTGCAGATAAACCTA
AAAGAGATTCCTTCTTAACTTACTTGATAAAGTCCTTAGAAATCCGTCAGAAGCCCTCTG
AATACAATTGTGATGTCGACAAACTCTGTCTTCGAATGACAGTTGAAAATTCTCCTGCTG
AACTGCTCGTAAACAAGTGGATTTCTTTTGCCTTGGAAAATAGCATTAAAAGGTTATGTC
TCAGTTTAAAAACGATTAATCGTGATCATTACTATCTGTGTGGTTTTGCATTTTGCGCTC
ATACATTAGTTCATTTAATTATATCGGATTGTGAGATCACAAATTGTTCCTTTAAGCTTC
CTGCTCTTAAAGTACTCTTTCTATTTGTTGTTTGCATTGAGGATGATGATTTTAAGGATC
TCATTGCTGGATGCCCACTAATTGAACAGTTACGCATTCAGGACACTAAAAAGTTGCGTA
CTATTGTAGTTTCAAATCCTAATCTGGAATTTTTCGGAGTGCATCTTCTTTGTTCTGATG
GTAAAATACGTGTCGAGTCCCCAAATCTTCATTCGATTGAATTTATTTCATTCAGCATAG
ACATGTGTGAAGTAGAGATTGCGTCCACGACAACAGTACGAGAGTTGACGTTGCGAGATG
CTTATGACCCAGAAACATTGATACATTTTATAGAAAAGTTCCCTCTACTTGAGAAACTTA
TCATAGATGGTTACAGTGACTTATGTGAAGTTGAGATTACTTCCAAACCAACAGTGCGGA
GTTTGACGTTGTGTAATATTAATGATGAAGATTTGACATTGTTTGATTGGGATGGCGATG
ATTTAAAAATGACATGGATGAATTTTATAGACAATTTCCCTCTACTTGAGAAACTCATCA
TAGATACTTGCAGTAGGTTGCAAAAACTTCATATTTCTCAACCGAATTTGGTTAGCTTGG
TGCTGAAGGATAGCATTGTGAAATGGGAGGCAAGAATAAATTCGCCCAAGTTGAAATCAT
TTGAGTATAAGGGTGGCCTCACAGATTTTACAGGCATAGAAGATTTACAAGAATTGGAAT
TCGTTCTGTTATATTTAGATCCCCTTAAGCTTCGTGATTACTACTACAGTTGGTTTAGAG
ATATGTTGGAGTCGTGTGCTCGCTCCAAGCATTTGAGTTTGATCTGCGATATTGAAGAGG
TTGTCCTCATTCCTGTTGAGGTAACTGATATATTACCAGTAAATGATATCACGAATCTGG
AGTTAGAAATTATTTCACGTCATGGTACTTTTGAAGGGGTTATAGATGATTTCACTTGGA
TTCTTCCAGATTTGAAGACTTTGTCATTGACTTTGGGTTCCACCACAAAGTTCTTCCAGT
TTCGTAGAGAGGAGGATGGTGAGCTCTCAGCAGAAGAAGTACACAAACCAAAACCTGATA
AGAGCGTATCCATTCTAAGAAATAACAATAAGTCATTTCTCAACATTCCAGAAATTGATG
AAGTTGGAATGATAACAGGGGAAGGACAAGATAGAATTTCCAGTTTGCCTATCGAAAATA
TCCGCCAAATCCTCTGA