Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g068060.3.1
CDS Infomation

transmembrane protein (AHRD V3.3 *** AT4G32680.1)
Sequence

ATGGCGACGAGCGGCAGAGATACCCGACGACGTCGTATTGTTGAACGGGGAAATGACCGA
TTAGCTCTAATTACCGGCCGGATCCCAACTCTACCATCGGAAACTGGATCGGGATCGGAA
ACTCGTCATTTGCACACCGCCTCTTGCCCTACTTGGATTTCTGAAAATCATCTTCCTTCT
AACCAATCCTCTCCTGTTTCTATTAGTGGGAGCGAGGGCTCTAGACCATTGTTGTTTGAT
GGTGATCATGGAATTCAGCCTGGTGAGCATGAAGGATCTGATGGCAAAAGCAGAACAACT
CCATTTATGCGAAAATGTGAGTCAAACATTGAATCAACAAGTGAACCTGCCTTGTATCTT
GATGACAAAGATCATTTATATGCGGATTCATCTACTGTAAATCCTCCAAGCCTTTCTGCT
TCTGATGGGGGTCGATTTTCAAAACTGAAGAGCAACTATCACAACATTTTCGCCCCAAAT
AAAATAAGTTCTGCAATTGCAGCTTCTGAGAGTATCCGCCTCAACTTTTCCCTCGTGGCT
GCCATTTTGGTTCTTTTGTCCTATGACAGCCACTTCTTCAAGTTGGTCATATTTTTCAGA
CCTCTTCTGCTACTGATGTTGACCAACATATCGATTGTTATTGCACGCCTTCTCGCAGAA
GAAGCTGGGTCACAGAGGAATCAAAAAGCAGCAGCAAACGGTATCCCTGGCGCTGGTATG
GTTGATCAAATTGGAAAGGCTCTGGAGCTGGGATTGTTATTGCAAAACGTTATGGGTGCA
GTGTTTATGGATTGTAGTATCTACTCAATAACAGTCGTATGTGGCCTTTCAATAGCACAA
AAGCTTGGCTGGTAA

Peptide Sequence

PEP ID

Solyc08g068060.3.1
PEP Infomation

transmembrane protein (AHRD V3.3 *** AT4G32680.1)
Sequence

MATSGRDTRRRRIVERGNDRLALITGRIPTLPSETGSGSETRHLHTASCPTWISENHLPS
NQSSPVSISGSEGSRPLLFDGDHGIQPGEHEGSDGKSRTTPFMRKCESNIESTSEPALYL
DDKDHLYADSSTVNPPSLSASDGGRFSKLKSNYHNIFAPNKISSAIAASESIRLNFSLVA
AILVLLSYDSHFFKLVIFFRPLLLLMLTNISIVIARLLAEEAGSQRNQKAAANGIPGAGM
VDQIGKALELGLLLQNVMGAVFMDCSIYSITVVCGLSIAQKLGW*

Transcript Sequence

Transcript ID

Solyc08g068060.3.1
Transcript Infomation

transmembrane protein (AHRD V3.3 *** AT4G32680.1)
Sequence

ATAAGAAAAGAAATGCAAGCACAACTTGAATACGAAGGGAACAGCTCTTGTCACAGATAC
GAAAAGGATAATAATGGCGACGAGCGGCAGAGATACCCGACGACGTCGTATTGTTGAACG
GGGAAATGACCGATTAGCTCTAATTACCGGCCGGATCCCAACTCTACCATCGGAAACTGG
ATCGGGATCGGAAACTCGTCATTTGCACACCGCCTCTTGCCCTACTTGGATTTCTGAAAA
TCATCTTCCTTCTAACCAATCCTCTCCTGTTTCTATTAGTGGGAGCGAGGGCTCTAGACC
ATTGTTGTTTGATGGTGATCATGGAATTCAGCCTGGTGAGCATGAAGGATCTGATGGCAA
AAGCAGAACAACTCCATTTATGCGAAAATGTGAGTCAAACATTGAATCAACAAGTGAACC
TGCCTTGTATCTTGATGACAAAGATCATTTATATGCGGATTCATCTACTGTAAATCCTCC
AAGCCTTTCTGCTTCTGATGGGGGTCGATTTTCAAAACTGAAGAGCAACTATCACAACAT
TTTCGCCCCAAATAAAATAAGTTCTGCAATTGCAGCTTCTGAGAGTATCCGCCTCAACTT
TTCCCTCGTGGCTGCCATTTTGGTTCTTTTGTCCTATGACAGCCACTTCTTCAAGTTGGT
CATATTTTTCAGACCTCTTCTGCTACTGATGTTGACCAACATATCGATTGTTATTGCACG
CCTTCTCGCAGAAGAAGCTGGGTCACAGAGGAATCAAAAAGCAGCAGCAAACGGTATCCC
TGGCGCTGGTATGGTTGATCAAATTGGAAAGGCTCTGGAGCTGGGATTGTTATTGCAAAA
CGTTATGGGTGCAGTGTTTATGGATTGTAGTATCTACTCAATAACAGTCGTATGTGGCCT
TTCAATAGCACAAAAGCTTGGCTGGTAA