Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g067790.3.1
CDS Infomation	SPOC domain/transcription elongation factor S-II, putative (AHRD V3.3 *** G7JBQ4_MEDTR)
Sequence	ATGTCCAGTGATCTTGTTTCTCAGCAATTTTCAGGACCACCTGATGGTCAGCTCATTCAA ATGGATCACGTTTCCAATAATCCGGACTCTATAGCACATATGCAGACCAGTATCATTGGA CACGTGCCAACTTCACAGCAGCTTGTTTGGTCAAATGAGCCTACAGCCAACAGATTTGAT ACTTCAGTTCCTGTGAATCAGTTGGGGCCAATGGGACCCAGAATGAACTCTCAGCACTTC ATGTTGTCACATCAGCAGACTAGAGGAGATAGATATGTGCCAAATAGTCCAGGTGTGCAG AAATCATCAGTACTCACCAAGCGCAAGGCTGAGATGTCATCAATGCCGCATGGTTCTACA CCTCAGGTGTCATCAATGCCAAATAAGCGGACTGCACAGGGAACGTTTTTGTCTGCGTCT CCAGGTTTTGTGCAGCAATCTTCTGCTATTAAGAAACCTGGACCGCAACAGTCAAAGTTA ACTTTGGGAGGTTCAACTAGTGTTCCTGCGTCAACCAAGAAATTGACCCGAAATGAATCC ATATCCAATAGAACTGCCTCCCAGCGGTCACAGACTCCAAGAGGACGCTCAATTCAAGTT GAGCCGACCTCCAAGGCGCAGTCTGAGTCCTCTGATGCCATTAGGTCCAAAATGAGAGAA TCACTTGCTTCAGCTCTGGCTATGGCTTGCCAGAATCCAGCTGCCAAGGATCTGGGTGAA GCAGTGGGTTCTCAGCCTTCACAACTGGATGTAACTACGACAACTGCCAATGAAGGTCTA CCCCAAAGCTCTGTTTCACACGTTCCTCAAAACTCTGGTGATGTACTTCCTTCAATTGGT CCTTTTCCTGTTGATACAAATAATGACGGTCATAGTTTGTCTCTTGGGCTTCATGATGAT GTGAGCATGGGAAATTCTGTACCTTGCTCTACAGAATTTGAGTTGCATGTGGACGATGTT CCCTTCAGTGACAATTTCTTTGTCAAAGATGAACTCTTGCAAGGGAATGGTCTCACTTGG GCAATGGATCTAGATATGCATTTAAGAGAAACTGATTTCCTCCAGGATGCTGAAAAGGCC AATTTGTTTGATGAGGATGTGGTTGAAGATAAAGGTGAGCATGCAAAATCATCTCCCGAA GATTTAGCTTTGCACATTGAGGCGGAACTTTTTAAATTGTTTGGAGGTGTGAACAAAAAA TATAAAGAGAGGGGCAGGTCTCTTCTCTTCAACCTAAAAGATCGCAGTAATCCTGAACTG AGAGAGAGAGTGATGTCAGGTGAGATACCTCCGGATAAGTTATGTTCAATGACTGCTGAA GAACTTGCTTCAAAAGAGCTATCTGAGTGGCGGGTGGCAAAAGCCGAGGAACTTGCTCAG ATGGTTGTTTTACCTGATAATGCAATTGACATGAGACGTTTGGTCAAAAAAACTCACAAG GGTGAATATCAGGTTGATTTTGAGCGGGATGATAATAATATTGCATCTGAGATATCTGCA GGTTCAAATGTCACGCAGTTTATGCCGAAGAAAGATAGGGGGAGAAATTCTGGCCCTTCT GGTAAGGATGAGTTAGGAAGTAAAGAAAATCTTACCAGCCAACGTAATTACTCAGAAAAG CAAGATGTGAAAGACAGCTTGGTAATTCCAGCTGATGGGGCTGATTTGTTGCAGGGGATG GTTGTAGAAGAATTCAAGAATGCTGAACTTCTTCCTCCTATTGTTTCCTTAACTGAATTT ATGGAATCACTTGATTCTGAACCTCCTTTTGAAAACCTGCCTGTTGAAAACAATCATTCT GCCCTTCTTCCAGAAAAAGGAAGTTCCGAGGACCCTAACAATGCTGTGGGTTCTGGTCTA GCCGCTAAATACCCTGTTGTTGCTTCTGAAGACAAATCTCTTGAAGGGGTCAAGAATCAT GTAGAGCAAAAGGAGTCTCTGGTATCTGCGGGTAGCCCTGTAGTAAAGAAAGTAACTAGT TCTGGTGATTTGAGCCCTATCAAGATGACAGGACCACATGGTAGTGTTTCTAGAGTTCCA TGTATCTGGGAGGGGGAACTGCAGCTTACTATTTCATCCTTGGTTACAGTCTTTGGTTCG TTTAGAAGTGGTGAAAAGACACCAACTAACGGATGGCCAAGCTCTCTTGAGATCAAGGGT AGAGTTCGACTTGATGCATTTGAGAAATTTCTTCAAGAGCTTCCTATGTCACGAAGTCGT GCAGTCATGGTTGTTCAATTTGTTTTGAAGGATAAGTCATCTGAGAGGGAACGGGCAGAC CTATCTGAGGCAGTGCATTCCTACGCTTCAGATGAGAGGTTGGGGTTTGCGGAACCTGCT CCAGGAGTGGAACTATATCTGTGTCCACCACACATACTCGATATGATAAGCAAACACCTT TCCAAAGACCCTAAAGAGCTATATGATTCTACAGATAATGGTCTAATTGGCGTAGTTGTA TGGAGAAAACTTCATATAAGTTCAACAATATCACCTAACTCGTCTTCACACCATAAACAC AGTTTGAAAAAACAACAGGGAGGACAACAGCATGAAAAAGCTGGAAACGTTAATGTAAAT TCGATCCCTATGCCCATGTCTGTGAAAAATGATCCTGCAGTGGATGATGACGATGACATC CCACCTGGGTTTGGTCCCAAAGCTGGTCGTGACGATGATGATTTGCCTGAGTTTAATTTT ACTGGCAACATAAATGCTTCTAGGCCTAGGCACCCATCTCAAAACATGTACCACCATGGG TCAAGAATGAACCCGTATAACCAAACACCCCCTTCTCGCCCTGTAGACCAAATGAGGGAA CTTATACTAAAGTATGGACAAACTGGTGCTAACAATGTTGGTCCATCGTGGAATGACGAT GATGATGACATCCCTGAGTGGCGGCCACAAGCCCCTCCACCCTTGCAGCGTCCTCCATAT CCATTAGGCCATAATTTTCCGCAGCACTTGGCTCATCAGGGACCATTGGCAACACCTATG CAACCACCTATTAATAATGGTATACCAAACAGGCCACAAATTATGTCACCCAGAGGGCCA TATCAAGTTGATTGGAGAAGGGATCAATCAAGGGGTAGGGGGTTCTGA

Peptide Sequence

PEP ID	Solyc08g067790.3.1
PEP Infomation	SPOC domain/transcription elongation factor S-II, putative (AHRD V3.3 *** G7JBQ4_MEDTR)
Sequence	MSSDLVSQQFSGPPDGQLIQMDHVSNNPDSIAHMQTSIIGHVPTSQQLVWSNEPTANRFD TSVPVNQLGPMGPRMNSQHFMLSHQQTRGDRYVPNSPGVQKSSVLTKRKAEMSSMPHGST PQVSSMPNKRTAQGTFLSASPGFVQQSSAIKKPGPQQSKLTLGGSTSVPASTKKLTRNES ISNRTASQRSQTPRGRSIQVEPTSKAQSESSDAIRSKMRESLASALAMACQNPAAKDLGE AVGSQPSQLDVTTTTANEGLPQSSVSHVPQNSGDVLPSIGPFPVDTNNDGHSLSLGLHDD VSMGNSVPCSTEFELHVDDVPFSDNFFVKDELLQGNGLTWAMDLDMHLRETDFLQDAEKA NLFDEDVVEDKGEHAKSSPEDLALHIEAELFKLFGGVNKKYKERGRSLLFNLKDRSNPEL RERVMSGEIPPDKLCSMTAEELASKELSEWRVAKAEELAQMVVLPDNAIDMRRLVKKTHK GEYQVDFERDDNNIASEISAGSNVTQFMPKKDRGRNSGPSGKDELGSKENLTSQRNYSEK QDVKDSLVIPADGADLLQGMVVEEFKNAELLPPIVSLTEFMESLDSEPPFENLPVENNHS ALLPEKGSSEDPNNAVGSGLAAKYPVVASEDKSLEGVKNHVEQKESLVSAGSPVVKKVTS SGDLSPIKMTGPHGSVSRVPCIWEGELQLTISSLVTVFGSFRSGEKTPTNGWPSSLEIKG RVRLDAFEKFLQELPMSRSRAVMVVQFVLKDKSSERERADLSEAVHSYASDERLGFAEPA PGVELYLCPPHILDMISKHLSKDPKELYDSTDNGLIGVVVWRKLHISSTISPNSSSHHKH SLKKQQGGQQHEKAGNVNVNSIPMPMSVKNDPAVDDDDDIPPGFGPKAGRDDDDLPEFNF TGNINASRPRHPSQNMYHHGSRMNPYNQTPPSRPVDQMRELILKYGQTGANNVGPSWNDD DDDIPEWRPQAPPPLQRPPYPLGHNFPQHLAHQGPLATPMQPPINNGIPNRPQIMSPRGP YQVDWRRDQSRGRGF*

Transcript Sequence

Transcript ID	Solyc08g067790.3.1
Transcript Infomation	SPOC domain/transcription elongation factor S-II, putative (AHRD V3.3 *** G7JBQ4_MEDTR)
Sequence	GGCTTTTTTAATTATTTTCCCAATAAAATGAAGATAAAGCTTAGCCTCAGCTCAGCTCCC AATTCTCTCTTCCTCTTCGTCTCTATCCAAAATGTATGTGGGCAGCTCAGTTTTTGGTGT TTCTAGCTGTTTTACTCCGTTTTCTTGCTGATTTGAGTGCAGGCCCTCCGTCCACACACT GTGTTTTTTTGTCATGTCCAGTGATCTTGTTTCTCAGCAATTTTCAGGACCACCTGATGG TCAGCTCATTCAAATGGATCACGTTTCCAATAATCCGGACTCTATAGCACATATGCAGAC CAGTATCATTGGACACGTGCCAACTTCACAGCAGCTTGTTTGGTCAAATGAGCCTACAGC CAACAGATTTGATACTTCAGTTCCTGTGAATCAGTTGGGGCCAATGGGACCCAGAATGAA CTCTCAGCACTTCATGTTGTCACATCAGCAGACTAGAGGAGATAGATATGTGCCAAATAG TCCAGGTGTGCAGAAATCATCAGTACTCACCAAGCGCAAGGCTGAGATGTCATCAATGCC GCATGGTTCTACACCTCAGGTGTCATCAATGCCAAATAAGCGGACTGCACAGGGAACGTT TTTGTCTGCGTCTCCAGGTTTTGTGCAGCAATCTTCTGCTATTAAGAAACCTGGACCGCA ACAGTCAAAGTTAACTTTGGGAGGTTCAACTAGTGTTCCTGCGTCAACCAAGAAATTGAC CCGAAATGAATCCATATCCAATAGAACTGCCTCCCAGCGGTCACAGACTCCAAGAGGACG CTCAATTCAAGTTGAGCCGACCTCCAAGGCGCAGTCTGAGTCCTCTGATGCCATTAGGTC CAAAATGAGAGAATCACTTGCTTCAGCTCTGGCTATGGCTTGCCAGAATCCAGCTGCCAA GGATCTGGGTGAAGCAGTGGGTTCTCAGCCTTCACAACTGGATGTAACTACGACAACTGC CAATGAAGGTCTACCCCAAAGCTCTGTTTCACACGTTCCTCAAAACTCTGGTGATGTACT TCCTTCAATTGGTCCTTTTCCTGTTGATACAAATAATGACGGTCATAGTTTGTCTCTTGG GCTTCATGATGATGTGAGCATGGGAAATTCTGTACCTTGCTCTACAGAATTTGAGTTGCA TGTGGACGATGTTCCCTTCAGTGACAATTTCTTTGTCAAAGATGAACTCTTGCAAGGGAA TGGTCTCACTTGGGCAATGGATCTAGATATGCATTTAAGAGAAACTGATTTCCTCCAGGA TGCTGAAAAGGCCAATTTGTTTGATGAGGATGTGGTTGAAGATAAAGGTGAGCATGCAAA ATCATCTCCCGAAGATTTAGCTTTGCACATTGAGGCGGAACTTTTTAAATTGTTTGGAGG TGTGAACAAAAAATATAAAGAGAGGGGCAGGTCTCTTCTCTTCAACCTAAAAGATCGCAG TAATCCTGAACTGAGAGAGAGAGTGATGTCAGGTGAGATACCTCCGGATAAGTTATGTTC AATGACTGCTGAAGAACTTGCTTCAAAAGAGCTATCTGAGTGGCGGGTGGCAAAAGCCGA GGAACTTGCTCAGATGGTTGTTTTACCTGATAATGCAATTGACATGAGACGTTTGGTCAA AAAAACTCACAAGGGTGAATATCAGGTTGATTTTGAGCGGGATGATAATAATATTGCATC TGAGATATCTGCAGGTTCAAATGTCACGCAGTTTATGCCGAAGAAAGATAGGGGGAGAAA TTCTGGCCCTTCTGGTAAGGATGAGTTAGGAAGTAAAGAAAATCTTACCAGCCAACGTAA TTACTCAGAAAAGCAAGATGTGAAAGACAGCTTGGTAATTCCAGCTGATGGGGCTGATTT GTTGCAGGGGATGGTTGTAGAAGAATTCAAGAATGCTGAACTTCTTCCTCCTATTGTTTC CTTAACTGAATTTATGGAATCACTTGATTCTGAACCTCCTTTTGAAAACCTGCCTGTTGA AAACAATCATTCTGCCCTTCTTCCAGAAAAAGGAAGTTCCGAGGACCCTAACAATGCTGT GGGTTCTGGTCTAGCCGCTAAATACCCTGTTGTTGCTTCTGAAGACAAATCTCTTGAAGG GGTCAAGAATCATGTAGAGCAAAAGGAGTCTCTGGTATCTGCGGGTAGCCCTGTAGTAAA GAAAGTAACTAGTTCTGGTGATTTGAGCCCTATCAAGATGACAGGACCACATGGTAGTGT TTCTAGAGTTCCATGTATCTGGGAGGGGGAACTGCAGCTTACTATTTCATCCTTGGTTAC AGTCTTTGGTTCGTTTAGAAGTGGTGAAAAGACACCAACTAACGGATGGCCAAGCTCTCT TGAGATCAAGGGTAGAGTTCGACTTGATGCATTTGAGAAATTTCTTCAAGAGCTTCCTAT GTCACGAAGTCGTGCAGTCATGGTTGTTCAATTTGTTTTGAAGGATAAGTCATCTGAGAG GGAACGGGCAGACCTATCTGAGGCAGTGCATTCCTACGCTTCAGATGAGAGGTTGGGGTT TGCGGAACCTGCTCCAGGAGTGGAACTATATCTGTGTCCACCACACATACTCGATATGAT AAGCAAACACCTTTCCAAAGACCCTAAAGAGCTATATGATTCTACAGATAATGGTCTAAT TGGCGTAGTTGTATGGAGAAAACTTCATATAAGTTCAACAATATCACCTAACTCGTCTTC ACACCATAAACACAGTTTGAAAAAACAACAGGGAGGACAACAGCATGAAAAAGCTGGAAA CGTTAATGTAAATTCGATCCCTATGCCCATGTCTGTGAAAAATGATCCTGCAGTGGATGA TGACGATGACATCCCACCTGGGTTTGGTCCCAAAGCTGGTCGTGACGATGATGATTTGCC TGAGTTTAATTTTACTGGCAACATAAATGCTTCTAGGCCTAGGCACCCATCTCAAAACAT GTACCACCATGGGTCAAGAATGAACCCGTATAACCAAACACCCCCTTCTCGCCCTGTAGA CCAAATGAGGGAACTTATACTAAAGTATGGACAAACTGGTGCTAACAATGTTGGTCCATC GTGGAATGACGATGATGATGACATCCCTGAGTGGCGGCCACAAGCCCCTCCACCCTTGCA GCGTCCTCCATATCCATTAGGCCATAATTTTCCGCAGCACTTGGCTCATCAGGGACCATT GGCAACACCTATGCAACCACCTATTAATAATGGTATACCAAACAGGCCACAAATTATGTC ACCCAGAGGGCCATATCAAGTTGATTGGAGAAGGGATCAATCAAGGGGTAGGGGGTTCTG AAGTTTTTTTCATTTTGGTAGTTCAGTGTTAGACATGATGTAAATTCTGAATCTTTGTTG TGTTTGGCTTTTTCTAGACTAGGTGTCTTAGCCTTTATTTTAGATGCTTAAAACTATAGT TTATACTGTACTTGTTCAGCATAAAGGCAAGAGACTATGTGATCTCTTTTAGCTGTTTTA TTGTCATTTTATCTCACCAAAATCATCAATCTGTTTCTCAAATGTGTAGGTTTTTTTTCT TCTACAAATGCTTTTTGAGAAAAGTATGCTTAAAAATAAAAAAAAAATGAAAAAAAGGAA TAAACTAGAGGAAATGGAGTTAATAAAGAAAAACTTCACTCTAAAAAAGTAAAAATGCTG TTTTATTAAAAGTAATT