Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g067170.2.1
CDS Infomation	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 - A0A151TCY2_CAJCA)
Sequence	ATGGCAGTCTCTTCGTCTACGAATAGAGCCGACACCCCTTTTGCCGATATCACCCACTTC CGCAGCCTCATTGGGGCTCTACAGTATCTGGCCATTACCCGTCCTGACATCCAGTTTGCT GTCAACCGAGTTGCTCAGCACATGCATCAACCAAGTGAACATGATTACCATTGTCTAAAA CGCATTCTCAGGTACATTTTTGGCACTCTTGGTCGTGGTTTACTCATTCGACCCGAGGAC TTGGAGCTTCGGGGGTTCTCAGATTCAGATTGGGCGAATGATAAAAATGACAGAAAATCT ACATCGAGGTTTCTCGTTTTTTTGGGGACGAACCTGATCTCCTGGTGTACAAAAAAACAA CCCAAGGTCTCTCAGTCCTCGACTGAAACTGAATACCGCGCCCTTGCTCTTCTCGCTACT GAGACCATGCGAGGCGAGGCGATTGCTGAATGCTTGTCTGAATTGCAATCTGAATCTCAT GAAAATCAGCAGAAAGCTCTGCTAACTTTGGTTTCCATCACAAAGGTGAGTCCTCAAAAT CGAAACTTGTTAGCGCAAACAAAGGGTGTTGTTTCTACCTTGCTCAGCTTATCGATGTCT CCATCATCAACTACTATTCAACTTCTCGCGCTCTCAGTTCTATTCAATCTCTCACTCAAT CCTAATCTCAAGCAAACTCTAGCAGACATGGAGAAAATCCTGTTTCTCAATTCGGTGATC CTGTCTTCGACTTCAGCTGAACCAAGTAGGATAGCAGCTTCACTTCTATGTAGTTTGGCA ATGTTAGATAAGAACAAGGCAAAATTTGGCGTGGCTGGAACGGTTGAGGCTCTCGTTAAG GTCATATCGAGGCCACGAGGCCCTGCTTCTCATCATTTCCTGAGTACATTAGCTGAATTG GTGCAGTTTCATGGGAATTGCACAGTGGCTGTTCGATCAGGGGCAGTTCCGGTGCTGATC AAGTTGGTGGAAGATTCTGATTGCCAGGATCTTGCTGGAACATCATTGGCGATACTATGC TTGCTTGCGAGGTTTGAAGAGGGACTCACTGCCTTGAAAGAGATGGATAAAATCGTGGCA TTACTAATCGAAATTTTGAAGGGGAAGTGTACGTTGAGTAAAGAGGGAGCTGCTGATATT CTACTCCGTTTATTCGATGAAAGTGAGGGATGCATACGAGATGCTTTGAGGCTGCCTGAG TTTTCATCTGTGCTAGCTGATCTCTCGGTTCGAGGGTCTGTGATAGCCCGAGAGAAGGCT AGTTTACTCATGAAGAAACTAATGGAAGCTAACATGGATGTTGTTTATGGTGATACTGGC AACAAAACAGCTGCATATTTGCAATGGATTTAA

Peptide Sequence

PEP ID	Solyc08g067170.2.1
PEP Infomation	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 - A0A151TCY2_CAJCA)
Sequence	MAVSSSTNRADTPFADITHFRSLIGALQYLAITRPDIQFAVNRVAQHMHQPSEHDYHCLK RILRYIFGTLGRGLLIRPEDLELRGFSDSDWANDKNDRKSTSRFLVFLGTNLISWCTKKQ PKVSQSSTETEYRALALLATETMRGEAIAECLSELQSESHENQQKALLTLVSITKVSPQN RNLLAQTKGVVSTLLSLSMSPSSTTIQLLALSVLFNLSLNPNLKQTLADMEKILFLNSVI LSSTSAEPSRIAASLLCSLAMLDKNKAKFGVAGTVEALVKVISRPRGPASHHFLSTLAEL VQFHGNCTVAVRSGAVPVLIKLVEDSDCQDLAGTSLAILCLLARFEEGLTALKEMDKIVA LLIEILKGKCTLSKEGAADILLRLFDESEGCIRDALRLPEFSSVLADLSVRGSVIAREKA SLLMKKLMEANMDVVYGDTGNKTAAYLQWI*

Transcript Sequence

Transcript ID	Solyc08g067170.2.1
Transcript Infomation	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 - A0A151TCY2_CAJCA)
Sequence	ATGGCAGTCTCTTCGTCTACGAATAGAGCCGACACCCCTTTTGCCGATATCACCCACTTC CGCAGCCTCATTGGGGCTCTACAGTATCTGGCCATTACCCGTCCTGACATCCAGTTTGCT GTCAACCGAGTTGCTCAGCACATGCATCAACCAAGTGAACATGATTACCATTGTCTAAAA CGCATTCTCAGGTACATTTTTGGCACTCTTGGTCGTGGTTTACTCATTCGACCCGAGGAC TTGGAGCTTCGGGGGTTCTCAGATTCAGATTGGGCGAATGATAAAAATGACAGAAAATCT ACATCGAGGTTTCTCGTTTTTTTGGGGACGAACCTGATCTCCTGGTGTACAAAAAAACAA CCCAAGGTCTCTCAGTCCTCGACTGAAACTGAATACCGCGCCCTTGCTCTTCTCGCTACT GAGACCATGCGAGGCGAGGCGATTGCTGAATGCTTGTCTGAATTGCAATCTGAATCTCAT GAAAATCAGCAGAAAGCTCTGCTAACTTTGGTTTCCATCACAAAGGTGAGTCCTCAAAAT CGAAACTTGTTAGCGCAAACAAAGGGTGTTGTTTCTACCTTGCTCAGCTTATCGATGTCT CCATCATCAACTACTATTCAACTTCTCGCGCTCTCAGTTCTATTCAATCTCTCACTCAAT CCTAATCTCAAGCAAACTCTAGCAGACATGGAGAAAATCCTGTTTCTCAATTCGGTGATC CTGTCTTCGACTTCAGCTGAACCAAGTAGGATAGCAGCTTCACTTCTATGTAGTTTGGCA ATGTTAGATAAGAACAAGGCAAAATTTGGCGTGGCTGGAACGGTTGAGGCTCTCGTTAAG GTCATATCGAGGCCACGAGGCCCTGCTTCTCATCATTTCCTGAGTACATTAGCTGAATTG GTGCAGTTTCATGGGAATTGCACAGTGGCTGTTCGATCAGGGGCAGTTCCGGTGCTGATC AAGTTGGTGGAAGATTCTGATTGCCAGGATCTTGCTGGAACATCATTGGCGATACTATGC TTGCTTGCGAGGTTTGAAGAGGGACTCACTGCCTTGAAAGAGATGGATAAAATCGTGGCA TTACTAATCGAAATTTTGAAGGGGAAGTGTACGTTGAGTAAAGAGGGAGCTGCTGATATT CTACTCCGTTTATTCGATGAAAGTGAGGGATGCATACGAGATGCTTTGAGGCTGCCTGAG TTTTCATCTGTGCTAGCTGATCTCTCGGTTCGAGGGTCTGTGATAGCCCGAGAGAAGGCT AGTTTACTCATGAAGAAACTAATGGAAGCTAACATGGATGTTGTTTATGGTGATACTGGC AACAAAACAGCTGCATATTTGCAATGGATTTAA