Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g066950.3.1
CDS Infomation	1-deoxy-D-xylulose-5-phosphate synthase (AHRD V3.3 *** A0A161ZT20_DAUCA)
Sequence	ATGGTTGCTGTTACTGCTCAGTACCCATTTGGTATCTGCCCTCAGTTCCATGGGAATTCA AGGTTACTTTCCCCGGAAACGGACTTCTCTGCTCTCAATTTTCCTTACACACTGGGATAT TCAAAATTGAGTCTTCACCCCAAGGGTCATGTTGCTGAAATACATTCTTTGCCACATGCT GGTGATTTCACTGGTGAAAATGAGCCAACACCAATTCTTGATGCAATTGAAAGTCCCATG AACCTAAAGAATTTATCAACCAAGGAACTGAAACAACTAGCTAATGAAATTCGATCAGAA TTAGCTTTTATCATTGCAAAATCTCAAAAACCTTCAAGTTCAAGTCTGACTGTTGTGGAG CTAACTGTTGCTATTCACCATGTATTTAATGCCCCTGTGGACAAAATATTGTGGGATGTC GCTGAACAAACATATGCACATAAACTTCTCACTGGAAGGAGGCAGATTATGCAAGCACTT GAAAAAACAAATGGCTGGCCTGTGGCAGCGCCAGATTTTGAAGGCGGATTCGACCCCTTC GGAGTTGGGCATGGATGCAACAGCGTATCTGCTGGACTCGGAATGGCCATTGCCCGAGAT TTGAAGGGGAAGCGTGATCGTGTAGTGGCAGTGATCAACAATGAAACGATTATGGCTGGC CAAGTTTATGAGGCAATGCGCAATTCAGGCTATTTGGACTCAAATATGATTGTGATATTA AATGATAGTCGGCATTCTTTGCACCCAAAGGTTGAGGAGACCTCTAAAACACCTATTAAT GCTTTCTCAAGTACTCTCAGCAAACTTCAGTCAAGTAAACTTTTCCGGAGGTTTAGAGAA CTTGCTAAGGCATTAACTAAGAAAATTGGGAAAGGCATGTATGAATGGGCAGCCAAGGTT GATGAGTATGCACGTGGTATGATTGGCCCACCAGGATCAACCCTCTTTGAAGAGCTTGGT CTTTACTACATTGGCCCTGTTGATGGACACAATATTGAAGATCTAGTATGTGTTCTGAAT GAAGTGGCATCGTTAGATTCAATGGGTCCTGTTTTAGTTCATGTTATAACCAAGGAAGAA CTGGAAGTAGGAGACAATCAAATGAATGCAGTTGCAAATAAAATAATGGAAGGTGTATCT ATCTCAGACACTATACCTTATGGCAATCGAACATATAGTGATTGCTTTGTGGAGGCCTTG ATATCAGAGGCAGAGAGACACAAAGATATTGTAGCTGTTCATGCAGGCATGGGAATGGAG CCTTCACTTCACCTTCTGAAGGATGTCTTTGCAGAGAAGTTTTTTGATGTTGGGATGGCC GAACAACATGCGGTAACATTTGCAGCTGGGTTGGCATGTGGAGGGCTGAAGCCATTCTGC ATAATTCCTTCAGCTTTCCTCCAAAGAGCCTATGATCAGGTCGTCCATGATGTAGATCGT CAGAAGGTTCCCGTGCGTTTCATCATTACAAGTGCTGGATTAGTAGGATCTGATGGTCCT ATACATTGTGGGACATTTGATATAGCATTTATGTCCTGTTTGCCAAACATGATCGTAATG GCTCCTTCTGATGAAGTTGAGCTTTCTCATATGGTTGCAACTGCTGCCCTTATTGATGAC AGGCCAGTTTGCTTCCGCTACCCTCGGGGTGCTCTTTCAGTGATGGAACACTCATTTAGT GGAATTCCCATTGAGGTTGGCAGAGGGAGAATACTTACAGAGGGTAAAGATGTTGCTTTA CTTGGCTATGGATCCATGGTACAAAATTGTCTGAGAGCTCAATCGCTTCTTTCAAAGCTT GGTGTTGAAGTGACTGTTGCTGATGCAAGATTCTGCAAGCCCCTTGACATACAACTTCTT AGGCAATTATGCAAGAACCATTCTTTTCTAGTTACAGTCGAGGAAGGCTCTATAGGAGGA TTTGCATCACATGTAGCACAGTTCCTCTCACTCGATGGGCAGCTCGATGCAGGAATCAAG TGGCGACCAATCACTTTGCCTGACAACTATATCGAGCAAGCATCACCAAAAGAGCAGCTT GCTGTTGCAGGGCTGACTGGAAATCACATTGCTGCAACTGCACTGAGTCTGCTTGGCCGT ACTCGAGAAGCTCTTCTTTTGATGTGCTAA

Peptide Sequence

PEP ID	Solyc08g066950.3.1
PEP Infomation	1-deoxy-D-xylulose-5-phosphate synthase (AHRD V3.3 *** A0A161ZT20_DAUCA)
Sequence	MVAVTAQYPFGICPQFHGNSRLLSPETDFSALNFPYTLGYSKLSLHPKGHVAEIHSLPHA GDFTGENEPTPILDAIESPMNLKNLSTKELKQLANEIRSELAFIIAKSQKPSSSSLTVVE LTVAIHHVFNAPVDKILWDVAEQTYAHKLLTGRRQIMQALEKTNGWPVAAPDFEGGFDPF GVGHGCNSVSAGLGMAIARDLKGKRDRVVAVINNETIMAGQVYEAMRNSGYLDSNMIVIL NDSRHSLHPKVEETSKTPINAFSSTLSKLQSSKLFRRFRELAKALTKKIGKGMYEWAAKV DEYARGMIGPPGSTLFEELGLYYIGPVDGHNIEDLVCVLNEVASLDSMGPVLVHVITKEE LEVGDNQMNAVANKIMEGVSISDTIPYGNRTYSDCFVEALISEAERHKDIVAVHAGMGME PSLHLLKDVFAEKFFDVGMAEQHAVTFAAGLACGGLKPFCIIPSAFLQRAYDQVVHDVDR QKVPVRFIITSAGLVGSDGPIHCGTFDIAFMSCLPNMIVMAPSDEVELSHMVATAALIDD RPVCFRYPRGALSVMEHSFSGIPIEVGRGRILTEGKDVALLGYGSMVQNCLRAQSLLSKL GVEVTVADARFCKPLDIQLLRQLCKNHSFLVTVEEGSIGGFASHVAQFLSLDGQLDAGIK WRPITLPDNYIEQASPKEQLAVAGLTGNHIAATALSLLGRTREALLLMC*

Transcript Sequence

Transcript ID	Solyc08g066950.3.1
Transcript Infomation	1-deoxy-D-xylulose-5-phosphate synthase (AHRD V3.3 *** A0A161ZT20_DAUCA)
Sequence	TCTAGACAAGCCCTTCTCCGACAAACCAAAGTGATATTTGACCCATATACTTTTCATTCA CCATCACTACCTCTCCAGAAATGCTCTGTTTGTCCTGTTATACGCCATTTTCGAGTTGAT TTTTTTTCTGAAAGCTCTCAATCTCATACTCCAAACTTCGTTTTTTACCGAATTGAGTGG ATGGTTGCTGTTACTGCTCAGTACCCATTTGGTATCTGCCCTCAGTTCCATGGGAATTCA AGGTTACTTTCCCCGGAAACGGACTTCTCTGCTCTCAATTTTCCTTACACACTGGGATAT TCAAAATTGAGTCTTCACCCCAAGGGTCATGTTGCTGAAATACATTCTTTGCCACATGCT GGTGATTTCACTGGTGAAAATGAGCCAACACCAATTCTTGATGCAATTGAAAGTCCCATG AACCTAAAGAATTTATCAACCAAGGAACTGAAACAACTAGCTAATGAAATTCGATCAGAA TTAGCTTTTATCATTGCAAAATCTCAAAAACCTTCAAGTTCAAGTCTGACTGTTGTGGAG CTAACTGTTGCTATTCACCATGTATTTAATGCCCCTGTGGACAAAATATTGTGGGATGTC GCTGAACAAACATATGCACATAAACTTCTCACTGGAAGGAGGCAGATTATGCAAGCACTT GAAAAAACAAATGGCTGGCCTGTGGCAGCGCCAGATTTTGAAGGCGGATTCGACCCCTTC GGAGTTGGGCATGGATGCAACAGCGTATCTGCTGGACTCGGAATGGCCATTGCCCGAGAT TTGAAGGGGAAGCGTGATCGTGTAGTGGCAGTGATCAACAATGAAACGATTATGGCTGGC CAAGTTTATGAGGCAATGCGCAATTCAGGCTATTTGGACTCAAATATGATTGTGATATTA AATGATAGTCGGCATTCTTTGCACCCAAAGGTTGAGGAGACCTCTAAAACACCTATTAAT GCTTTCTCAAGTACTCTCAGCAAACTTCAGTCAAGTAAACTTTTCCGGAGGTTTAGAGAA CTTGCTAAGGCATTAACTAAGAAAATTGGGAAAGGCATGTATGAATGGGCAGCCAAGGTT GATGAGTATGCACGTGGTATGATTGGCCCACCAGGATCAACCCTCTTTGAAGAGCTTGGT CTTTACTACATTGGCCCTGTTGATGGACACAATATTGAAGATCTAGTATGTGTTCTGAAT GAAGTGGCATCGTTAGATTCAATGGGTCCTGTTTTAGTTCATGTTATAACCAAGGAAGAA CTGGAAGTAGGAGACAATCAAATGAATGCAGTTGCAAATAAAATAATGGAAGGTGTATCT ATCTCAGACACTATACCTTATGGCAATCGAACATATAGTGATTGCTTTGTGGAGGCCTTG ATATCAGAGGCAGAGAGACACAAAGATATTGTAGCTGTTCATGCAGGCATGGGAATGGAG CCTTCACTTCACCTTCTGAAGGATGTCTTTGCAGAGAAGTTTTTTGATGTTGGGATGGCC GAACAACATGCGGTAACATTTGCAGCTGGGTTGGCATGTGGAGGGCTGAAGCCATTCTGC ATAATTCCTTCAGCTTTCCTCCAAAGAGCCTATGATCAGGTCGTCCATGATGTAGATCGT CAGAAGGTTCCCGTGCGTTTCATCATTACAAGTGCTGGATTAGTAGGATCTGATGGTCCT ATACATTGTGGGACATTTGATATAGCATTTATGTCCTGTTTGCCAAACATGATCGTAATG GCTCCTTCTGATGAAGTTGAGCTTTCTCATATGGTTGCAACTGCTGCCCTTATTGATGAC AGGCCAGTTTGCTTCCGCTACCCTCGGGGTGCTCTTTCAGTGATGGAACACTCATTTAGT GGAATTCCCATTGAGGTTGGCAGAGGGAGAATACTTACAGAGGGTAAAGATGTTGCTTTA CTTGGCTATGGATCCATGGTACAAAATTGTCTGAGAGCTCAATCGCTTCTTTCAAAGCTT GGTGTTGAAGTGACTGTTGCTGATGCAAGATTCTGCAAGCCCCTTGACATACAACTTCTT AGGCAATTATGCAAGAACCATTCTTTTCTAGTTACAGTCGAGGAAGGCTCTATAGGAGGA TTTGCATCACATGTAGCACAGTTCCTCTCACTCGATGGGCAGCTCGATGCAGGAATCAAG TGGCGACCAATCACTTTGCCTGACAACTATATCGAGCAAGCATCACCAAAAGAGCAGCTT GCTGTTGCAGGGCTGACTGGAAATCACATTGCTGCAACTGCACTGAGTCTGCTTGGCCGT ACTCGAGAAGCTCTTCTTTTGATGTGCTAAATTCTATTTCATTGTTCTTGTAAAGTGTAA ATATCTAAGGCCCTCATATACATAATTATGAAGTGTAGAAGTGGAAAATACACAAGGTAG GAGAAGATGGGAAAAGAAGAAAATAAACAGGATGAGGAAGTTTATGATAGGAAAGAAGCA GTCTATATTTCTCAAAGTAGGGGCAACAAGCCAACAATGTACCTCATTTCTTGAGTGACA AAATGGCCATTGGCTTGGCATGAAGAGTGTGTCCTTGTGAAGGCCAAACATCGAACGTTT TCGCCTGATGTTTAGTATGGCTTGCCATGGCAAAAATCTGAGACATGTGTTACTGAGTAT TGAGGTGCTTGGTTAAAGTTTGTGTCACGCATATCTGAATCTTTTTTTGTCAAAAATATT TTTCAAGGGTTATGTCTTCTTGAAAGGTGCATAAGGAGGTAAAATTAGCAGTATTTTCAG TTACAATTAATTTGCATGACAGTTGAAATCCAGCCCAAATTCATGATGTGTTGACTGACC TACATGTAAAATAAGAGACATGAAAAAA