Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g066580.3.1
CDS Infomation	nuclear pore complex Nup85-like protein (AHRD V3.3 *** AT4G32910.1)
Sequence	ATGCCAGGGCTGACGTCAGAACCCGATGACCTTGCAATGGTTCCAGTCTCGCTGGAGACA GAAAATCAACCCGTGGTCAACTACCCTCTCCGTCATGGTCTCAAATCCCCAATTCATCGA CTCTCCTTTTCATGGGCGTGTGGAAATACTCTCCGAGTATCAGTTTTCCGGAAGCCTCAG TCGGAGACGGCGGACGGAGAAGGCGAGGCTGGCGGAAGAGTGGTGGAAGTGAAGCTTAGT AACAGTGGAGATGAGGAAGTTGATGCTGCAAGATGGAGGAGAATGGCCTACAGTTCAGTG ACTCCTTTCGCTCTTCTTCAGAGCCGGAAACATTCTTTGTCTGCAGCATCGAGAATGTCG TTGGATATCCCTCCTTACAAGGCAGAGTGGTGGGAGCATGTCATAGAGTACAGCAAAGAG ATAAGTTCTCTTCTCAGTGATCAAAAACCGCCTCCTAAATCAATTATCGAAGATGCCAAG TCGGTAGTAAATGAAATTGCAGCGCCAGTGTGTCTGAAAGCTGCGTGGGAGCTATTGGAG ATATTTTACATAGACAAACAATCTCAATCTTGGATTCCTGAACGGTTGCTAGATTGGTTA GCTGACTACAATTCCTTATTCTCGGGAACTCTACCAACTATTCACTCGAAGCTTGTGGAT TTTCAGCAGGAACTTGTTGGAGTACAGGTTGTTGAAGATGATCCTAACTACTGGGATGCA ATGTCATCAGCATTGGCTGTTGGCTGGCTGGAAACTGTGGTAAAATTGCTGCGCTTGCAT GGCTCTTACCGGTTTGATCAATTATCTAGTCGAGAGGCCGTGTACCTTTTCTATCGAGTT CCAAAGTCTATCACTCTTTGCGTGTTTTGCCTGAGAGATCTAACTACAGGATGCACTGCC ATGTCGGATGATAAAGTGGACTTTCTTGTTCTTTTTGTATCGCATTGTTCTTCTTTAGCT TCTAAGAATGGACTGGTTGAAGCAGTTGCTGTTCTTATATCCAAGATGCCTAGAATGCGT CCGAGTCTGAGAGAAGACAATTTGGGCGAGTGTTACAAAACCAAGCCTGACTTCATGAAG GCTTGGGAGAAGTGGAGAACACAAATAAGTAAACTGGACTGCAGTTCCTACTGGCTTCAA TGTGATCACCGGCAGACCAGAGAAGGGCTGAAAAATTTGATCCAGATCATGTTGGGAAAT CCGACTGTTCTATCAAATGCAACTTTCAACTGGATGGAGCTTTTTATATCCCATTTCTTA TATGTTAGGCCATTTACTGCGGGTCTAGAGAGCATGCACAATTCAGCTAAGAAATGCATG CAAGTAAAGCCAGCTTCCATCCCCCATAAGCTGTTTGGTCTTATACTTGGAATTCTTGGA GAAAATACTGAGGTTGTTCTAGCAGAGTGTTCAAGATCATTTGGCCCTTGGATGATGGCA CATGCTGTAGAGTTGTTGACAGCTGGGAGCACTCATGCAGAAATTCTTTTGCATGAAGAG CATTCCAAACTTGGAGGAGTTAGCATAGAAGAGCTGCATAGACTTGTATATGCACAAGTT CTGTCTTCTCATGCATTAACGTGGCAAATTGCGCCAATATACTTGACTTCATGCATAAAA CAAGGGATTAGATTATTGGAGAATTTGCTGTACAAGCAGCCTGTACAGCATAGCCAAATT CTGTTAAAGAGTATAGAGATCTGCCGCCTGTATGAACTTGACACTATAAATTCGAACATT ATGAGGATTGCTGGTGTGCATCACTGGAAACATGGGAGAAAAGGCTCTGGTGTCTTCTGG CTACAGCAAGCTCGAGATGAATTTCGTTTAAACAGAATTGCCAAGCAATTATTTGATTTC GTGGGGAAGTCTGTATCTGATGAAGGATTCAAGCAATGGGAGGGTCTCATAGAGTTGCTG GGTTCTGAGTCTAGAACTGCTGGTGGACTTGAGTTTCTGAACAAGTACAGGGACTTTAGG AGATCCCTATTGCAGGTTCACGGTGATACACCCACTGATGCAGCTCGTAATGCAGCTGAA GCTCTCGTCTCTCTCATGAAAAATCCTTCCACGCCGCAACGCTTTTGGTTACCTCTTCTA TATGATTCATTGAAATTGTTAATGTGGCAGGAGCGACCGTTGGTTAATGTTTCTCAAACT CAGCTTCTGTTGAATAAACTGCAAGAATTGTCCATGGCAAGATTGCGGCCAGACTTTGTT GAAGCTGACTTGCCATCTGATGCCTTAAGCTCTGTCAGGCTGGCACTTGCCACTAACCTA GGTCGTGCAATCCTCGAAGAGTGA

Peptide Sequence

PEP ID	Solyc08g066580.3.1
PEP Infomation	nuclear pore complex Nup85-like protein (AHRD V3.3 *** AT4G32910.1)
Sequence	MPGLTSEPDDLAMVPVSLETENQPVVNYPLRHGLKSPIHRLSFSWACGNTLRVSVFRKPQ SETADGEGEAGGRVVEVKLSNSGDEEVDAARWRRMAYSSVTPFALLQSRKHSLSAASRMS LDIPPYKAEWWEHVIEYSKEISSLLSDQKPPPKSIIEDAKSVVNEIAAPVCLKAAWELLE IFYIDKQSQSWIPERLLDWLADYNSLFSGTLPTIHSKLVDFQQELVGVQVVEDDPNYWDA MSSALAVGWLETVVKLLRLHGSYRFDQLSSREAVYLFYRVPKSITLCVFCLRDLTTGCTA MSDDKVDFLVLFVSHCSSLASKNGLVEAVAVLISKMPRMRPSLREDNLGECYKTKPDFMK AWEKWRTQISKLDCSSYWLQCDHRQTREGLKNLIQIMLGNPTVLSNATFNWMELFISHFL YVRPFTAGLESMHNSAKKCMQVKPASIPHKLFGLILGILGENTEVVLAECSRSFGPWMMA HAVELLTAGSTHAEILLHEEHSKLGGVSIEELHRLVYAQVLSSHALTWQIAPIYLTSCIK QGIRLLENLLYKQPVQHSQILLKSIEICRLYELDTINSNIMRIAGVHHWKHGRKGSGVFW LQQARDEFRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAGGLEFLNKYRDFR RSLLQVHGDTPTDAARNAAEALVSLMKNPSTPQRFWLPLLYDSLKLLMWQERPLVNVSQT QLLLNKLQELSMARLRPDFVEADLPSDALSSVRLALATNLGRAILEE*

Transcript Sequence

Transcript ID	Solyc08g066580.3.1
Transcript Infomation	nuclear pore complex Nup85-like protein (AHRD V3.3 *** AT4G32910.1)
Sequence	ACCTAATGTGACATCTCCATGTGTAGTCCGTAAAGATCCCAAATTGAAATTATGAACTCA TTCCCTCGCTTTGCCATAAACCCCTTCTTAAAACCCTAGATAGTCACAAGAAAAACATTT TCTGTAGCATCCGCGACAATCCGGCGAAATGCCAGGGCTGACGTCAGAACCCGATGACCT TGCAATGGTTCCAGTCTCGCTGGAGACAGAAAATCAACCCGTGGTCAACTACCCTCTCCG TCATGGTCTCAAATCCCCAATTCATCGACTCTCCTTTTCATGGGCGTGTGGAAATACTCT CCGAGTATCAGTTTTCCGGAAGCCTCAGTCGGAGACGGCGGACGGAGAAGGCGAGGCTGG CGGAAGAGTGGTGGAAGTGAAGCTTAGTAACAGTGGAGATGAGGAAGTTGATGCTGCAAG ATGGAGGAGAATGGCCTACAGTTCAGTGACTCCTTTCGCTCTTCTTCAGAGCCGGAAACA TTCTTTGTCTGCAGCATCGAGAATGTCGTTGGATATCCCTCCTTACAAGGCAGAGTGGTG GGAGCATGTCATAGAGTACAGCAAAGAGATAAGTTCTCTTCTCAGTGATCAAAAACCGCC TCCTAAATCAATTATCGAAGATGCCAAGTCGGTAGTAAATGAAATTGCAGCGCCAGTGTG TCTGAAAGCTGCGTGGGAGCTATTGGAGATATTTTACATAGACAAACAATCTCAATCTTG GATTCCTGAACGGTTGCTAGATTGGTTAGCTGACTACAATTCCTTATTCTCGGGAACTCT ACCAACTATTCACTCGAAGCTTGTGGATTTTCAGCAGGAACTTGTTGGAGTACAGGTTGT TGAAGATGATCCTAACTACTGGGATGCAATGTCATCAGCATTGGCTGTTGGCTGGCTGGA AACTGTGGTAAAATTGCTGCGCTTGCATGGCTCTTACCGGTTTGATCAATTATCTAGTCG AGAGGCCGTGTACCTTTTCTATCGAGTTCCAAAGTCTATCACTCTTTGCGTGTTTTGCCT GAGAGATCTAACTACAGGATGCACTGCCATGTCGGATGATAAAGTGGACTTTCTTGTTCT TTTTGTATCGCATTGTTCTTCTTTAGCTTCTAAGAATGGACTGGTTGAAGCAGTTGCTGT TCTTATATCCAAGATGCCTAGAATGCGTCCGAGTCTGAGAGAAGACAATTTGGGCGAGTG TTACAAAACCAAGCCTGACTTCATGAAGGCTTGGGAGAAGTGGAGAACACAAATAAGTAA ACTGGACTGCAGTTCCTACTGGCTTCAATGTGATCACCGGCAGACCAGAGAAGGGCTGAA AAATTTGATCCAGATCATGTTGGGAAATCCGACTGTTCTATCAAATGCAACTTTCAACTG GATGGAGCTTTTTATATCCCATTTCTTATATGTTAGGCCATTTACTGCGGGTCTAGAGAG CATGCACAATTCAGCTAAGAAATGCATGCAAGTAAAGCCAGCTTCCATCCCCCATAAGCT GTTTGGTCTTATACTTGGAATTCTTGGAGAAAATACTGAGGTTGTTCTAGCAGAGTGTTC AAGATCATTTGGCCCTTGGATGATGGCACATGCTGTAGAGTTGTTGACAGCTGGGAGCAC TCATGCAGAAATTCTTTTGCATGAAGAGCATTCCAAACTTGGAGGAGTTAGCATAGAAGA GCTGCATAGACTTGTATATGCACAAGTTCTGTCTTCTCATGCATTAACGTGGCAAATTGC GCCAATATACTTGACTTCATGCATAAAACAAGGGATTAGATTATTGGAGAATTTGCTGTA CAAGCAGCCTGTACAGCATAGCCAAATTCTGTTAAAGAGTATAGAGATCTGCCGCCTGTA TGAACTTGACACTATAAATTCGAACATTATGAGGATTGCTGGTGTGCATCACTGGAAACA TGGGAGAAAAGGCTCTGGTGTCTTCTGGCTACAGCAAGCTCGAGATGAATTTCGTTTAAA CAGAATTGCCAAGCAATTATTTGATTTCGTGGGGAAGTCTGTATCTGATGAAGGATTCAA GCAATGGGAGGGTCTCATAGAGTTGCTGGGTTCTGAGTCTAGAACTGCTGGTGGACTTGA GTTTCTGAACAAGTACAGGGACTTTAGGAGATCCCTATTGCAGGTTCACGGTGATACACC CACTGATGCAGCTCGTAATGCAGCTGAAGCTCTCGTCTCTCTCATGAAAAATCCTTCCAC GCCGCAACGCTTTTGGTTACCTCTTCTATATGATTCATTGAAATTGTTAATGTGGCAGGA GCGACCGTTGGTTAATGTTTCTCAAACTCAGCTTCTGTTGAATAAACTGCAAGAATTGTC CATGGCAAGATTGCGGCCAGACTTTGTTGAAGCTGACTTGCCATCTGATGCCTTAAGCTC TGTCAGGCTGGCACTTGCCACTAACCTAGGTCGTGCAATCCTCGAAGAGTGACTTTATTA CCCCTGTTTTCTTGCTTGATAGATCACTGGTTGCATCTTTCCGATCATTACTTGCAGCAG AAAACAAAATCCGGACTACCCATTTTGTTATTTGTTTCTTTTCTTGAAGGGGTTAACTTG AAAAGCTACATATGTGAAGCTGACACTGCATAACGAATGGTCTTGCCCCCTCTGAGCCAC TTCTGTCACCTACATGCTGCAGAACTAGACAGAGCTAAACCCCGTTGAAAGCGTTTGGAT GAGAACTTCAGGCTATTTATTTTTTTCTTTCTGGATTGGGGTACCTACAATGTATATGCT TTTGTAAACCACCACGAATGCCCCTGCCCGTACCTGGTTAATGTGTTGAGATAGAACTCT GTAAAGAGTTGCTGGCTAATTGTAATAATCATGTTCTATATTTGTTTTGACCATTTTTAT CATATGCCTTGTCGTTATTCTAAAGGGTCATTTGATCGCGGTTTTGAAACAGTAATTCCA ACATTAAGGGGTCATTTGTTTGGCAACAAATTATCCCAGGATTACTAAATCTGGGATAAT TTTTTCCACCATATATATGGGATCAATATGAAATACAATAATTTTATT