Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g066180.3.1
CDS Infomation

endoribonuclease YbeY-like
Sequence

ATGCTTTCTCGTCTCAGCAGGACTACTCCTCCACCACTCGCCATGGCGGCGCGTGTTCTT
CCACGCTCATTCCATCCTACCGCCGCGTCTGCCATGAGTGTCTCCACGAACTCGCATTTC
ATTCTCCCTCCGTCACCTACGGTGGCTCATATTTCCTTCGGCAAATCTTTGTCAATTATT
GGTCGGAAGTTTCATTATGGATTGAATTGCAAAGAGGACAGGAGATGGAGTGTTGCAGGA
TGGAGTGGCAAAGTGTTTGCTAGTCAGAGAGAGTATAGGAAGTCTCGGAAAAGGTCGTTG
AAGAAGAAAGAGAAAGAGTTGGAACTTAGTGTAAACATTTGCATTGAAGAGCAATTGCCC
GATGATCCTGAAATTGTGGATATTTCGGAAATGCTTCGTCTTAATGTTCCAATGGCTATG
AAATTTGCATTTGATAATTTGAAAGATTCAGACTATCAAACGAGGGATAGAGCAATTAAT
GACGTTGGTTGCTTTGAAAGTGTTGAATTGTCAGTATTGCTTTGCAACGATGAGTTCATC
CGCGAACTTAATAAGGACTGGAGAGATGTGGATAGCCCTACTGATGTCCTTTCAATGTCA
CAACACATACCTGAACTTGAGCTGCCAATTTTAATGCTGGGAGACATTGTGATTTCGGTG
GAGACAGCAGCAAGGCAAGCAGAGGAAAGGGGACATAGTTTACTGGACGAGATACGCATC
TTACTGGTTCATGGCTTGCTACATCTTTTGGGGTTCGATCATGAGATTAGTGATGAAGCT
GAAGCTGAAATGGAGAAAGAAGAGGAGCTCCTTCTAAAATGTCTTGGGTGGAAGGGAAAA
GGATTAATTCAGAGCGCATATGATGCTGAGGCTGCTGGAAGTTCTCTTTTGGAGAACATT
GACAGGAAGAAAGAAGGGAGTCTACGATTTTACAGACCAAAGTTTAGCTACATCTTCTGT
GATATGGATGGTACCCTCCTGAACAGCAAAAGTCAGATTAGTTCAGCAACTGCTGAAGCT
CTTAGAGAGGCCACTTCTAGGGGTGTAAAAGTGGTCATAGCTACTGGAAAAACTCGTCCT
GCTGCCATTACTCTGCTCAAGAGTGTAGGTTTAGCTGGAAAAGACGGCATTATTTCAGAG
GTTTCTCCAGGAGTATTTGTGCAGGGGTTGCTCGTTTATGGCAGACAAGGCAGGGAAATA
TCTCGAATAAACTTGGATCCAGTTGTGTGTAGAGAGGCATGTCTCTACTCTCTTGAGCAT
AGGATTCCCCTTGCTGCATTTAGTGAGGACCGGATCTTTACATTGTTTCATCACCCGCTT
GTGGATTCACTTCATACCATATATAATGAGCCAAAGGCCGAGATTATTCCTTCAGTTGAG
CAACTATTGACTGGGACAGACATACAGAAGGTGATCTTCTTCGATACTGTGGAGGGAGTG
AGTTCTACATTGAGACCATACTGGGAGGAGTCACTTGGAGATAATGCCTCTGTTGTCCAA
GCTCAACCGGACATACTTGAAATTGTTCCTCCTGGATCTTCTAAGGGCAGTGGAGTAAAG
ATTCTTCTTGATCATTTGGGTGTTAGTCCTAAGGAGATAATGGCCATTGGTGATGGAGAG
AATGATGTGGAGATGCTTAAGTTGGCTTCCCTCGGTGTTGCTCTTAGCAATGGATCAGAG
AAGGCAAAAGCTGTTGCAGACGTGATTGGTGCCAGCAACGATGAAAATGGAGCAGCTGAT
GCAATCTACCGTTATGCTTTTTGA

Peptide Sequence

PEP ID

Solyc08g066180.3.1
PEP Infomation

endoribonuclease YbeY-like
Sequence

MLSRLSRTTPPPLAMAARVLPRSFHPTAASAMSVSTNSHFILPPSPTVAHISFGKSLSII
GRKFHYGLNCKEDRRWSVAGWSGKVFASQREYRKSRKRSLKKKEKELELSVNICIEEQLP
DDPEIVDISEMLRLNVPMAMKFAFDNLKDSDYQTRDRAINDVGCFESVELSVLLCNDEFI
RELNKDWRDVDSPTDVLSMSQHIPELELPILMLGDIVISVETAARQAEERGHSLLDEIRI
LLVHGLLHLLGFDHEISDEAEAEMEKEEELLLKCLGWKGKGLIQSAYDAEAAGSSLLENI
DRKKEGSLRFYRPKFSYIFCDMDGTLLNSKSQISSATAEALREATSRGVKVVIATGKTRP
AAITLLKSVGLAGKDGIISEVSPGVFVQGLLVYGRQGREISRINLDPVVCREACLYSLEH
RIPLAAFSEDRIFTLFHHPLVDSLHTIYNEPKAEIIPSVEQLLTGTDIQKVIFFDTVEGV
SSTLRPYWEESLGDNASVVQAQPDILEIVPPGSSKGSGVKILLDHLGVSPKEIMAIGDGE
NDVEMLKLASLGVALSNGSEKAKAVADVIGASNDENGAADAIYRYAF*

Transcript Sequence

Transcript ID

Solyc08g066180.3.1
Transcript Infomation

endoribonuclease YbeY-like
Sequence

AAAATATCACATGTAGACATTAGACATATGGACCCTCGTGTGAAATTCCAAATCTCCTGC
GTCGCTCTCATTCCGGCAAAAAATAGCCACTCAATCGAGCGATACGTTTAAAGTAAATAA
ATATAGTACCAACTATTTCCATACATTTTTCTACTCGAATGCTTTCTCGTCTCAGCAGGA
CTACTCCTCCACCACTCGCCATGGCGGCGCGTGTTCTTCCACGCTCATTCCATCCTACCG
CCGCGTCTGCCATGAGTGTCTCCACGAACTCGCATTTCATTCTCCCTCCGTCACCTACGG
TGGCTCATATTTCCTTCGGCAAATCTTTGTCAATTATTGGTCGGAAGTTTCATTATGGAT
TGAATTGCAAAGAGGACAGGAGATGGAGTGTTGCAGGATGGAGTGGCAAAGTGTTTGCTA
GTCAGAGAGAGTATAGGAAGTCTCGGAAAAGGTCGTTGAAGAAGAAAGAGAAAGAGTTGG
AACTTAGTGTAAACATTTGCATTGAAGAGCAATTGCCCGATGATCCTGAAATTGTGGATA
TTTCGGAAATGCTTCGTCTTAATGTTCCAATGGCTATGAAATTTGCATTTGATAATTTGA
AAGATTCAGACTATCAAACGAGGGATAGAGCAATTAATGACGTTGGTTGCTTTGAAAGTG
TTGAATTGTCAGTATTGCTTTGCAACGATGAGTTCATCCGCGAACTTAATAAGGACTGGA
GAGATGTGGATAGCCCTACTGATGTCCTTTCAATGTCACAACACATACCTGAACTTGAGC
TGCCAATTTTAATGCTGGGAGACATTGTGATTTCGGTGGAGACAGCAGCAAGGCAAGCAG
AGGAAAGGGGACATAGTTTACTGGACGAGATACGCATCTTACTGGTTCATGGCTTGCTAC
ATCTTTTGGGGTTCGATCATGAGATTAGTGATGAAGCTGAAGCTGAAATGGAGAAAGAAG
AGGAGCTCCTTCTAAAATGTCTTGGGTGGAAGGGAAAAGGATTAATTCAGAGCGCATATG
ATGCTGAGGCTGCTGGAAGTTCTCTTTTGGAGAACATTGACAGGAAGAAAGAAGGGAGTC
TACGATTTTACAGACCAAAGTTTAGCTACATCTTCTGTGATATGGATGGTACCCTCCTGA
ACAGCAAAAGTCAGATTAGTTCAGCAACTGCTGAAGCTCTTAGAGAGGCCACTTCTAGGG
GTGTAAAAGTGGTCATAGCTACTGGAAAAACTCGTCCTGCTGCCATTACTCTGCTCAAGA
GTGTAGGTTTAGCTGGAAAAGACGGCATTATTTCAGAGGTTTCTCCAGGAGTATTTGTGC
AGGGGTTGCTCGTTTATGGCAGACAAGGCAGGGAAATATCTCGAATAAACTTGGATCCAG
TTGTGTGTAGAGAGGCATGTCTCTACTCTCTTGAGCATAGGATTCCCCTTGCTGCATTTA
GTGAGGACCGGATCTTTACATTGTTTCATCACCCGCTTGTGGATTCACTTCATACCATAT
ATAATGAGCCAAAGGCCGAGATTATTCCTTCAGTTGAGCAACTATTGACTGGGACAGACA
TACAGAAGGTGATCTTCTTCGATACTGTGGAGGGAGTGAGTTCTACATTGAGACCATACT
GGGAGGAGTCACTTGGAGATAATGCCTCTGTTGTCCAAGCTCAACCGGACATACTTGAAA
TTGTTCCTCCTGGATCTTCTAAGGGCAGTGGAGTAAAGATTCTTCTTGATCATTTGGGTG
TTAGTCCTAAGGAGATAATGGCCATTGGTGATGGAGAGAATGATGTGGAGATGCTTAAGT
TGGCTTCCCTCGGTGTTGCTCTTAGCAATGGATCAGAGAAGGCAAAAGCTGTTGCAGACG
TGATTGGTGCCAGCAACGATGAAAATGGAGCAGCTGATGCAATCTACCGTTATGCTTTTT
GAGGTTATCTTCAGGAACGCAAGAATTGGAGAGGGCTATCCACACTTTCATAAAGTACCA
AGGTTTAGTTTTCTAACTTATTCAATTCGAGTAAACTTCTCAGTAGTCACCAATTAGGCT
GTAGTGGATCAAGTTCACCCCCTTCTCCGTTCATATTATAGGCCATTTATAATGAATTTA
GATAAAGAAAACCCTATCTGTTGTCATTTACCTTTTGAAAGAATGAGGTAAGAAGCATAT
TTCGTATCTGCAGAGAACATCATTTTTCCCTTGAACATAGGGTATGTCAATGACATCTTA
CTGTAAGCCTGAATTCTTATATTCGCGATTCGTTTCTTTTAATTTCACATGCAAGATAAA
TAGATAATGCTCCAAAGATAAAATCTTGCCCAGAAGCCTGTTAATACATATTTTACATGT
TTATCAATAAAATCATGATTGATTATACATTCTTG