Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g065690.1.1
CDS Infomation

Vacuolar-processing enzyme (AHRD V3.3 *** VPE_CITSI)
Sequence

ATGATATTTAAGTACATAGTATGTGTTGCACTAGTTGTTGTGCTCTCAATTTGTGTCAAC
ATTGAAGGTCGTAGTGTCTCTAAATTCTTAACAGAAGAAACTGTAGGGACCAAATGGGCT
GTCCTAGTTGCTGGCTCTAATGGATGGTGGAATTACAGGCATCAGGCTGATGTATGTCAC
GCTTATCAGTTACTCAAGAAAGGTGGTCTTAAAGACGAAAACATTATTGTATTCATGTAC
GATGATATTGCTAACAATACTATGAATCCTAGACCCGGAGTTATCATCAATAATCCACAT
GGCCAAGATGTTTACAAAGGTGTTCCTAAGGATTATGTAGGTGAAGATGTTAATGCTGAA
AACTTTTTCAATGTTATCCTTGCAAACAAAAGTGGTATAACTGGAGGAAGTGGTAAAGTT
TTGAACAGTGCTCCAAATGACCATATTTTCATCTACTATGTTGATCATGGTGGCCCTGGA
ATTGTTTCAATGCCAACTGGAGTTGTTTACGCGAATGATTTGATTGATGTGTTGAAAAAG
AAGCATGGTTCTGGGACATATAGTAAACTGGTATTTTACTTAGAAGCTTGTGAGTCTGGA
AGCATGTTTGACGGTCTTCTTCCTGAAGGTTTAGATATTTATGTAACGACTGCATCAAAT
CCCAATGAAAGTAGTTGGGGAACATATTGTGGTGTGGGTGATGCACGCGATCCCTGCCTT
GTAGCTTGTCCCCCTCCTGAGTTTAAAGGTGTGTGCTTAGGAGACTTGTACAGTGTTGCT
TGGATGGAGGACAGTGATGTTCAAGATCGTCAAACTGAAACTCTAGATGATCAGTACGAT
AGGATTGCAAACAGAACAGCAGCCAATCTAACATATGGCTCTCATGTCATGCAATATGGT
GATATGGTGTTAAGTGTTGATGCTCTTTTCCAGTATATGGGCGTTGCTTCGATAAATCAC
TCTCATGTCTCCATGAATTCTTATAAATCATCGTCACAGAATGTGGAACAACGAGAAACA
GAGCTTTTCTACTGGCAATCCAAATACGACAATGCTCCTGAAGGTTCTGATGACTATTTT
GAAGCTCGCGCCAAACTTATTAATGTTGTAGCACATAGAAGTCAAGTGGACAATAACGTA
AAACATATTGGAGATCTTCTGTTTGGAGTTAAATATGGTAATGAGGCACTACAAACTGTT
CGATCTTCTGGACAACCACTAGTTGATAACTGGGATTGTCTTAAATCCTATGTCGAGATA
TTTGAGGCACATTGTGGAAAATTAAGCTCATATGGAAAGAAACATATCCGTGGTATCGCG
AATATTTGTAATGCTGGAATTGAGAGGGAGCAAATGACTGCTGCAACTGTACAAGCATGT
GGTCCTTTGTAG

Peptide Sequence

PEP ID

Solyc08g065690.1.1
PEP Infomation

Vacuolar-processing enzyme (AHRD V3.3 *** VPE_CITSI)
Sequence

MIFKYIVCVALVVVLSICVNIEGRSVSKFLTEETVGTKWAVLVAGSNGWWNYRHQADVCH
AYQLLKKGGLKDENIIVFMYDDIANNTMNPRPGVIINNPHGQDVYKGVPKDYVGEDVNAE
NFFNVILANKSGITGGSGKVLNSAPNDHIFIYYVDHGGPGIVSMPTGVVYANDLIDVLKK
KHGSGTYSKLVFYLEACESGSMFDGLLPEGLDIYVTTASNPNESSWGTYCGVGDARDPCL
VACPPPEFKGVCLGDLYSVAWMEDSDVQDRQTETLDDQYDRIANRTAANLTYGSHVMQYG
DMVLSVDALFQYMGVASINHSHVSMNSYKSSSQNVEQRETELFYWQSKYDNAPEGSDDYF
EARAKLINVVAHRSQVDNNVKHIGDLLFGVKYGNEALQTVRSSGQPLVDNWDCLKSYVEI
FEAHCGKLSSYGKKHIRGIANICNAGIEREQMTAATVQACGPL*

Transcript Sequence

Transcript ID

Solyc08g065690.1.1
Transcript Infomation

Vacuolar-processing enzyme (AHRD V3.3 *** VPE_CITSI)
Sequence

ATGATATTTAAGTACATAGTATGTGTTGCACTAGTTGTTGTGCTCTCAATTTGTGTCAAC
ATTGAAGGTCGTAGTGTCTCTAAATTCTTAACAGAAGAAACTGTAGGGACCAAATGGGCT
GTCCTAGTTGCTGGCTCTAATGGATGGTGGAATTACAGGCATCAGGCTGATGTATGTCAC
GCTTATCAGTTACTCAAGAAAGGTGGTCTTAAAGACGAAAACATTATTGTATTCATGTAC
GATGATATTGCTAACAATACTATGAATCCTAGACCCGGAGTTATCATCAATAATCCACAT
GGCCAAGATGTTTACAAAGGTGTTCCTAAGGATTATGTAGGTGAAGATGTTAATGCTGAA
AACTTTTTCAATGTTATCCTTGCAAACAAAAGTGGTATAACTGGAGGAAGTGGTAAAGTT
TTGAACAGTGCTCCAAATGACCATATTTTCATCTACTATGTTGATCATGGTGGCCCTGGA
ATTGTTTCAATGCCAACTGGAGTTGTTTACGCGAATGATTTGATTGATGTGTTGAAAAAG
AAGCATGGTTCTGGGACATATAGTAAACTGGTATTTTACTTAGAAGCTTGTGAGTCTGGA
AGCATGTTTGACGGTCTTCTTCCTGAAGGTTTAGATATTTATGTAACGACTGCATCAAAT
CCCAATGAAAGTAGTTGGGGAACATATTGTGGTGTGGGTGATGCACGCGATCCCTGCCTT
GTAGCTTGTCCCCCTCCTGAGTTTAAAGGTGTGTGCTTAGGAGACTTGTACAGTGTTGCT
TGGATGGAGGACAGTGATGTTCAAGATCGTCAAACTGAAACTCTAGATGATCAGTACGAT
AGGATTGCAAACAGAACAGCAGCCAATCTAACATATGGCTCTCATGTCATGCAATATGGT
GATATGGTGTTAAGTGTTGATGCTCTTTTCCAGTATATGGGCGTTGCTTCGATAAATCAC
TCTCATGTCTCCATGAATTCTTATAAATCATCGTCACAGAATGTGGAACAACGAGAAACA
GAGCTTTTCTACTGGCAATCCAAATACGACAATGCTCCTGAAGGTTCTGATGACTATTTT
GAAGCTCGCGCCAAACTTATTAATGTTGTAGCACATAGAAGTCAAGTGGACAATAACGTA
AAACATATTGGAGATCTTCTGTTTGGAGTTAAATATGGTAATGAGGCACTACAAACTGTT
CGATCTTCTGGACAACCACTAGTTGATAACTGGGATTGTCTTAAATCCTATGTCGAGATA
TTTGAGGCACATTGTGGAAAATTAAGCTCATATGGAAAGAAACATATCCGTGGTATCGCG
AATATTTGTAATGCTGGAATTGAGAGGGAGCAAATGACTGCTGCAACTGTACAAGCATGT
GGTCCTTTGTAG