Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g065610.3.1
CDS Infomation

Vacuolar processing enzyme (AHRD V3.3 *** V9M6Z0_9ROSA)
Sequence

ATGAATCGTTCCGTCGCCGGAGTTTTGTTCCTGATTGCGCTCTCGTTAAACGTCTCCGTT
TCCGAGAGCCGTAATTTTTTGAAACTTCCGTCTGAAGGTTCTAGATTCTTCGATGCCGAT
GAGATCGACTCCGTCGGTACTAGATGGGCTATTTTGCTTGCCGGATCAAACGGTTATTGG
AATTACCGTCACCAGGCTGATATATGTCATGCATATCAACTGTTGAAGAAGGGTGGTCTC
AAAGATGAGAACATTGTTGTGTTCATGTATGATGACATTGCAAACAATGAAGAGAACCCA
AGGCAAGGAGTTATCATTAATAGCCCTCATGGTGAGGATGTTTACAACGGAGTACCTAAG
GATTACACGGGGGATGATGTTACTGTTGACAACTTTCTTGCTGCTCTCCTTGGGAACAAA
ACTGCACTTACCGGAGGCAGTGGAAAGGTTGTAGATAGTGGTCCAAATGATCATATCTTC
ATCTTTTATAGTGATCATGGAGGTGCTGGAGTGCTTGGAATGCCTACCAATCCTTACCTC
TATGCAAATGATCTGATTGATGCTCTGAAAATGAAGCATGCTTCGGGAACATACAAAAGC
TTGGTATTTTACCTTGAAGCTTGTGAGTCTGGAAGTATGTTTGAGGGTCTTCTTCCTGAA
GGTTTAAACATCTATGCCACAACAGCATCAAATGCTGATGAGAGCAGCTGGGGAACCTAT
TGCCCAGGGGAGTACCCTAGTCCTCCTATCGAATATGACACCTGCCTGGGTGACTTGTAT
AGTATTTCCTGGATGGAGGACAGTGAAAGACACAACCTGCGGACTGAAAGTTTGAAGCAG
CAATATCACCTGGTCAAAGAGAGAACTGCCAGTGGGAATCCTGCCTATGGTTCGCATGTC
ATGCAATATGGTGATGTACATCTCAGCAAGGATGCTGTATTCCTATATATGGGTACCGAT
CCTGCAAATGATAATTCTACTTTTATGGATGACAATTCCTTGCGAGTATCAAAGGCTGTA
AACCAGCGTGATGCAGATCTTGTGCATTTCTGGTACAAGTTCCACAAGGCTCCTGAAGGC
TCTGTTAGCAAAACTGAGGCTCAGAAACGCTTAAATGAAGCAATATCACATAGAATGCAC
TTAGATAACAGCATAGCCCTTGTCGGTAAGCTTTTGTTTGGAATTAAAAAAGGTCCAGAG
GTGCTGACTAGTGTCCGCCCTGCTGGTCAGCCGCTTGTTGACAATTGGGACTGTCTTAAA
TCTTATGTAAGAACATTTGAAACACATTGTGGATCGTTATCTCAGTATGGAATGAAACAT
ATGCGCTCTGTTGCTAACATATGCAACGCTGGAATTAAAATGGAGCAGATGGTGGAGGCA
TCGGCACAAGCTTGTCCCAGTGTTCCATCCTATACCTGGAGTTCCCTCCACAGGGGTTTT
AGTGCATGA

Peptide Sequence

PEP ID

Solyc08g065610.3.1
PEP Infomation

Vacuolar processing enzyme (AHRD V3.3 *** V9M6Z0_9ROSA)
Sequence

MNRSVAGVLFLIALSLNVSVSESRNFLKLPSEGSRFFDADEIDSVGTRWAILLAGSNGYW
NYRHQADICHAYQLLKKGGLKDENIVVFMYDDIANNEENPRQGVIINSPHGEDVYNGVPK
DYTGDDVTVDNFLAALLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGAGVLGMPTNPYL
YANDLIDALKMKHASGTYKSLVFYLEACESGSMFEGLLPEGLNIYATTASNADESSWGTY
CPGEYPSPPIEYDTCLGDLYSISWMEDSERHNLRTESLKQQYHLVKERTASGNPAYGSHV
MQYGDVHLSKDAVFLYMGTDPANDNSTFMDDNSLRVSKAVNQRDADLVHFWYKFHKAPEG
SVSKTEAQKRLNEAISHRMHLDNSIALVGKLLFGIKKGPEVLTSVRPAGQPLVDNWDCLK
SYVRTFETHCGSLSQYGMKHMRSVANICNAGIKMEQMVEASAQACPSVPSYTWSSLHRGF
SA*

Transcript Sequence

Transcript ID

Solyc08g065610.3.1
Transcript Infomation

Vacuolar processing enzyme (AHRD V3.3 *** V9M6Z0_9ROSA)
Sequence

AATGAAAAGAGAAATAGCAAAGGAGAGGCTATATCAGCAGCTACGTAAGAAGCTTCAAAA
ATTAAAAAAATCATGTATTGGTCCACTTAGTGGGAATCATCATCTCAGTTAACTATTGAA
TCTTAGCCGTCCACGTATATCACATGAATATTCTTTCATCTCTATAAATGTTTACATATT
CATTACAGAACCTTTTCTATAATAACAACACTCTTGTTTTTTTAATTGTATTATCGGAGC
TCGGATAATGAATCGTTCCGTCGCCGGAGTTTTGTTCCTGATTGCGCTCTCGTTAAACGT
CTCCGTTTCCGAGAGCCGTAATTTTTTGAAACTTCCGTCTGAAGGTTCTAGATTCTTCGA
TGCCGATGAGATCGACTCCGTCGGTACTAGATGGGCTATTTTGCTTGCCGGATCAAACGG
TTATTGGAATTACCGTCACCAGGCTGATATATGTCATGCATATCAACTGTTGAAGAAGGG
TGGTCTCAAAGATGAGAACATTGTTGTGTTCATGTATGATGACATTGCAAACAATGAAGA
GAACCCAAGGCAAGGAGTTATCATTAATAGCCCTCATGGTGAGGATGTTTACAACGGAGT
ACCTAAGGATTACACGGGGGATGATGTTACTGTTGACAACTTTCTTGCTGCTCTCCTTGG
GAACAAAACTGCACTTACCGGAGGCAGTGGAAAGGTTGTAGATAGTGGTCCAAATGATCA
TATCTTCATCTTTTATAGTGATCATGGAGGTGCTGGAGTGCTTGGAATGCCTACCAATCC
TTACCTCTATGCAAATGATCTGATTGATGCTCTGAAAATGAAGCATGCTTCGGGAACATA
CAAAAGCTTGGTATTTTACCTTGAAGCTTGTGAGTCTGGAAGTATGTTTGAGGGTCTTCT
TCCTGAAGGTTTAAACATCTATGCCACAACAGCATCAAATGCTGATGAGAGCAGCTGGGG
AACCTATTGCCCAGGGGAGTACCCTAGTCCTCCTATCGAATATGACACCTGCCTGGGTGA
CTTGTATAGTATTTCCTGGATGGAGGACAGTGAAAGACACAACCTGCGGACTGAAAGTTT
GAAGCAGCAATATCACCTGGTCAAAGAGAGAACTGCCAGTGGGAATCCTGCCTATGGTTC
GCATGTCATGCAATATGGTGATGTACATCTCAGCAAGGATGCTGTATTCCTATATATGGG
TACCGATCCTGCAAATGATAATTCTACTTTTATGGATGACAATTCCTTGCGAGTATCAAA
GGCTGTAAACCAGCGTGATGCAGATCTTGTGCATTTCTGGTACAAGTTCCACAAGGCTCC
TGAAGGCTCTGTTAGCAAAACTGAGGCTCAGAAACGCTTAAATGAAGCAATATCACATAG
AATGCACTTAGATAACAGCATAGCCCTTGTCGGTAAGCTTTTGTTTGGAATTAAAAAAGG
TCCAGAGGTGCTGACTAGTGTCCGCCCTGCTGGTCAGCCGCTTGTTGACAATTGGGACTG
TCTTAAATCTTATGTAAGAACATTTGAAACACATTGTGGATCGTTATCTCAGTATGGAAT
GAAACATATGCGCTCTGTTGCTAACATATGCAACGCTGGAATTAAAATGGAGCAGATGGT
GGAGGCATCGGCACAAGCTTGTCCCAGTGTTCCATCCTATACCTGGAGTTCCCTCCACAG
GGGTTTTAGTGCATGATTGGCATGTAATGCGAAATATGCACGCCTAGATGCTACCAAAAT
TATCCGTAATTATCAGTATGAAGATTGATATGGTTGTTTGCTAGTGTAATTGCTTCCTTG
TAAATACAGTTTAGAAGCACATCAATATTGAGTGGAAATGTACTAGATGAACATTTCTTA
TTGTAAATATTGTTATAGTTGGTGATCATTGTAAATAACTCATTACTATGCAAAAAGTTC
TACCTGAACAAACTTTCTTTCATCTATATTTCTTTTTGCATCTATATGTTCTACA