Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g065500.2.1
CDS Infomation

Phosphatase 2C family protein (AHRD V3.3 *** A0A061GL17_THECC)
Sequence

ATGGGTATATGTGGACTCGTTAGTTGTATATCATCGACATCTTTTGAGATTCAACCTGTT
GATTTTGGTAATGAAAATGTTGTTCATTATGATGATAACAACATTAACGAGAACCAATGT
GTAATTGGTTCTGTTTTTTCTCAACAAGGAAATAAAGGAATCAATCAAGATTCTGCTATT
CTCTATCAGGGATATGGTGTAGAAAATGGAGTTTTTGGTGGAGTTTTCGATGGGCATGGG
AAAAATGGACAAGTAGTTAGTAAATTTGTTATGAATAAGTTGCCATCTTTGCTGCTGAAG
TGTATACTTTCTTTGCCAAAGATTACTTCTCCGAAACAAAATGTTAAACATGTTGATGAG
GAATTAGTGAAGAACAAGAATTTTGATAAGTGGAAAGACGCGTGTTTGAATTCATTTAAG
GTGATGGATAAAGATATTAAAAGTCTTGAGAAATTGGATTGTTCATGTAGTGGAACAACT
GCTGTCGTTGCTATAAGACAGGATGATGATTTGATTATCGCGAATCTTGGTGATTCTCGT
GCTGTACTAGGAAGAAAGACAGAGGAGGGAGTAATTGAGGCTGTTCAGTTAACTACTGAT
TTGAAGCCTAGCCTGCCTTCTGAAGCAGAAAGAATAAGGAACTGTGATGGTAGAGTTCTT
GCATTGAAGGAAGAACTACATATACAGAGAGTGTGGTTACCACATGAAGATGTTCCTGGA
TTGGCCATGTCGCGAGCTTTTGGAGATTTCATGCTGAAAAACTATGGCATAATCTCCAAG
CCTGATGTCTCTTATCACCACATTTCACCAAATGACCAATTTCTTGTCCTAGCAACTGAT
GGGGTATGGGATGTGCTGAGCAACGATCAAGTCGTTTCCATAGTGTGTGCAGCAAATAAT
GCAGCAGCAGCGGCAGAGGCAGTAGTACAAGCTTCTTTAGATGCATGGGAACAGAAGTTT
CCAAACAGCAAGAGAGACGACAGCACTGTCATCTGCTTGTTCTTGCAATAA

Peptide Sequence

PEP ID

Solyc08g065500.2.1
PEP Infomation

Phosphatase 2C family protein (AHRD V3.3 *** A0A061GL17_THECC)
Sequence

MGICGLVSCISSTSFEIQPVDFGNENVVHYDDNNINENQCVIGSVFSQQGNKGINQDSAI
LYQGYGVENGVFGGVFDGHGKNGQVVSKFVMNKLPSLLLKCILSLPKITSPKQNVKHVDE
ELVKNKNFDKWKDACLNSFKVMDKDIKSLEKLDCSCSGTTAVVAIRQDDDLIIANLGDSR
AVLGRKTEEGVIEAVQLTTDLKPSLPSEAERIRNCDGRVLALKEELHIQRVWLPHEDVPG
LAMSRAFGDFMLKNYGIISKPDVSYHHISPNDQFLVLATDGVWDVLSNDQVVSIVCAANN
AAAAAEAVVQASLDAWEQKFPNSKRDDSTVICLFLQ*

Transcript Sequence

Transcript ID

Solyc08g065500.2.1
Transcript Infomation

Phosphatase 2C family protein (AHRD V3.3 *** A0A061GL17_THECC)
Sequence

GTATAACTCATAATTAACCAGAGCCAGCTAACTAAGTAAACTATTTTTTCAAGCAATGTA
ACAATAATTTTCATAAACATCAAGTTGGGGCCAGCAAAACCTACGTGTAATTTATAACAT
TAATTAAAATTTGCGTGTGGAGATTCTACAAAAAAATAACTCAATTGCCCCTTGAAATGA
ACCTTAGGGTAATGTACAACAATAAAATACAATTAACAAGTCTACTATTGCATCTCAATG
ACTTTTTGGAATCCTCTCTGAGCCATTACTACATTATTTTACTCTTTATTCAATTTATTA
ATCCCATTTTCAACTCTTTTGAAAGCTCTAATATTCCTTTATATATATATATACATGATA
CTGTAGGAACCACAAACAAAAAAAACAAAGAGCAGCCGATAATAATATGGGTATATGTGG
ACTCGTTAGTTGTATATCATCGACATCTTTTGAGATTCAACCTGTTGATTTTGGTAATGA
AAATGTTGTTCATTATGATGATAACAACATTAACGAGAACCAATGTGTAATTGGTTCTGT
TTTTTCTCAACAAGGAAATAAAGGAATCAATCAAGATTCTGCTATTCTCTATCAGGGATA
TGGTGTAGAAAATGGAGTTTTTGGTGGAGTTTTCGATGGGCATGGGAAAAATGGACAAGT
AGTTAGTAAATTTGTTATGAATAAGTTGCCATCTTTGCTGCTGAAGTGTATACTTTCTTT
GCCAAAGATTACTTCTCCGAAACAAAATGTTAAACATGTTGATGAGGAATTAGTGAAGAA
CAAGAATTTTGATAAGTGGAAAGACGCGTGTTTGAATTCATTTAAGGTGATGGATAAAGA
TATTAAAAGTCTTGAGAAATTGGATTGTTCATGTAGTGGAACAACTGCTGTCGTTGCTAT
AAGACAGGATGATGATTTGATTATCGCGAATCTTGGTGATTCTCGTGCTGTACTAGGAAG
AAAGACAGAGGAGGGAGTAATTGAGGCTGTTCAGTTAACTACTGATTTGAAGCCTAGCCT
GCCTTCTGAAGCAGAAAGAATAAGGAACTGTGATGGTAGAGTTCTTGCATTGAAGGAAGA
ACTACATATACAGAGAGTGTGGTTACCACATGAAGATGTTCCTGGATTGGCCATGTCGCG
AGCTTTTGGAGATTTCATGCTGAAAAACTATGGCATAATCTCCAAGCCTGATGTCTCTTA
TCACCACATTTCACCAAATGACCAATTTCTTGTCCTAGCAACTGATGGGGTATGGGATGT
GCTGAGCAACGATCAAGTCGTTTCCATAGTGTGTGCAGCAAATAATGCAGCAGCAGCGGC
AGAGGCAGTAGTACAAGCTTCTTTAGATGCATGGGAACAGAAGTTTCCAAACAGCAAGAG
AGACGACAGCACTGTCATCTGCTTGTTCTTGCAATAACAACATGTTTCTTTGAAAAATAA
TCCTTGAGCTATGTCTATAAGCAAATACTGTTTTTTCTTGCAATCTCCGCAACTATGTCA
GATGTTAGATGCACTTTGGATGCCATTATAATTAGTACTAGTATATATGGTCAATCAAAC
TTATACAACAAACTATGAAGATTGTTATCCATCTTGTTTTAGTGTTCTATCAAGAACTGT
GGATAGCTAGTTGTCTTGAATGTATGCAACTTTTAATTATTGCTAAAAGTTTTCACTGTG
TGAAAATTTATCAGAAATTATGAAGTCAAAGAAAAATAAGTCATAGCCTATCTCGTTCAT
TGAGCAAACACGAATTTATTTATCAATATTAGTTGTTCTTATATTCTTGGGCTTACTGTT
TTAGCTACCATTTAAATAAATCTATAATCTCTTTGTGACTTCGAAAGACGAATCATTGTG
ATAGAACGAAGAATATAAGGAGTAAGATCTTTACTTCAGTAAAACAAAGATTTGATTTAG
GACTGAGATATCCATATACCTATAATGTTTTACTTGGTTACAGATCGGAAAAATAGCTAT
ATACATTCATGTTGGCTTATCACATTCTCGCTCAGTAGTTGTGATGTCAATACGGATAGA
TGATTAGATGCTC