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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g065140.1.1
CDS Infomation

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT1G17620.1)
Sequence

ATGACAGACAGAGTTTACCCTTCAGCCAAGCCTAATGGCACTGCGCCCACTGCTGCAAAT
CCACACGCTGCTCCGGTGAAGAACCAGATGTACAACAACCCAAATCGTGTCCCTTACCGA
CCGACACCAACAGCCTACCACCGACACAACCGCCGTCGTTGCAACGGCCGGCGTTGTTTC
TGTATGTGTTGTTTCTGGTCTATTCTCATCATTTGCATCCTCCTCCTCCTTGCAGCTATT
GCTGGTGCTATTTTCTACGTTCTTTACCATCCTCAACGCCCTACATTCGCAGTTTCTTCA
CTCAAGATCTCTAATTTCAATCTCACTACTTCCACAGACGACACAACCCATCTCACTACA
AAATTCAACCTCACACTCTCAACCAAAAACCCAAACAAGAAATTGATATACAACTATAAC
ACTATCTCTATCACTGCACTTTCAAATCAAGTTGTTTTAGCTAAAGGGTCGTTTCCTGGA
TTCACCAGCACTACAAATAACATTACAATTATACACTCCACTCTATCGATGGCGTCACAA
GTACTTGATGTTGATTCAGTTTCATCTCTAAAATCAGATCTGAAGAGGAAAGCTGGGTTA
CCGGTCACAATATTGATGGATACTATGGTAGAAGTGAAAATGGACAAATTGAAAAGCAAA
AGGGTAGGGATTAGAGTAACGTGTGAAGGAATTCATGGATCGACACCAAAGGGTAAAGCT
CCAGCAGTGGCATCAACAAATAATGCCAAGTGTAAGGTTGATCTAAGAATCAAGATCTTG
AAATGGACTTTCTAA

Peptide Sequence

PEP ID

Solyc08g065140.1.1
PEP Infomation

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT1G17620.1)
Sequence

MTDRVYPSAKPNGTAPTAANPHAAPVKNQMYNNPNRVPYRPTPTAYHRHNRRRCNGRRCF
CMCCFWSILIICILLLLAAIAGAIFYVLYHPQRPTFAVSSLKISNFNLTTSTDDTTHLTT
KFNLTLSTKNPNKKLIYNYNTISITALSNQVVLAKGSFPGFTSTTNNITIIHSTLSMASQ
VLDVDSVSSLKSDLKRKAGLPVTILMDTMVEVKMDKLKSKRVGIRVTCEGIHGSTPKGKA
PAVASTNNAKCKVDLRIKILKWTF*

Transcript Sequence

Transcript ID

Solyc08g065140.1.1
Transcript Infomation

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT1G17620.1)
Sequence

ATGACAGACAGAGTTTACCCTTCAGCCAAGCCTAATGGCACTGCGCCCACTGCTGCAAAT
CCACACGCTGCTCCGGTGAAGAACCAGATGTACAACAACCCAAATCGTGTCCCTTACCGA
CCGACACCAACAGCCTACCACCGACACAACCGCCGTCGTTGCAACGGCCGGCGTTGTTTC
TGTATGTGTTGTTTCTGGTCTATTCTCATCATTTGCATCCTCCTCCTCCTTGCAGCTATT
GCTGGTGCTATTTTCTACGTTCTTTACCATCCTCAACGCCCTACATTCGCAGTTTCTTCA
CTCAAGATCTCTAATTTCAATCTCACTACTTCCACAGACGACACAACCCATCTCACTACA
AAATTCAACCTCACACTCTCAACCAAAAACCCAAACAAGAAATTGATATACAACTATAAC
ACTATCTCTATCACTGCACTTTCAAATCAAGTTGTTTTAGCTAAAGGGTCGTTTCCTGGA
TTCACCAGCACTACAAATAACATTACAATTATACACTCCACTCTATCGATGGCGTCACAA
GTACTTGATGTTGATTCAGTTTCATCTCTAAAATCAGATCTGAAGAGGAAAGCTGGGTTA
CCGGTCACAATATTGATGGATACTATGGTAGAAGTGAAAATGGACAAATTGAAAAGCAAA
AGGGTAGGGATTAGAGTAACGTGTGAAGGAATTCATGGATCGACACCAAAGGGTAAAGCT
CCAGCAGTGGCATCAACAAATAATGCCAAGTGTAAGGTTGATCTAAGAATCAAGATCTTG
AAATGGACTTTCTAA