Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g062770.3.1
CDS Infomation

Methyltransferase (AHRD V3.3 *** F8WL68_CITUN)
Sequence

ATGGAGGAAAATAAGCAGCCATCATCACAAAAGATACAGATATACCCCACCTCCACTGGT
GAAATATCTCCTTTCTGGAGAGACAAGTACGAAAAAGATGCAAAGAAGTACTGGGATATC
TTTTACAAGCGCCATCAAGATAAATTCTTTAAAGACAGGCATTACCTGGACAAGGAATGG
GGTCAATACTTCTCTGGGATTGACGAGAAAGTCATTCTTGAGGTTGGGTGTGGGGCTGGA
AATACCATCTTTCCTTTGCTTGCTACAATACCAAACATATTCGTCCATGCATGCGATTTT
TCACCTCGAGCTGTGAACTTAGTTAAGTCGCACAAGGATTTTGACGATGCTCGGGTGAAT
GCATTTGTCTGTGATCCAACAGTGGATGACCTGATCCAGCATATTTCTCCTTCATCAGTG
GACGTTGTTACCATGATATTTGTTCTATCTGCAGTATCTCCTGAGAAGATGCCTCTGATG
TTACAAAACATCAGAAAAGTTCTGAAGAAAGATGGCTGTGTCTTATTTCGGGACTATGCA
ACTGGTGACCTTGCTCAGGAAAGGCTTACCTCCAAGGAACAAAAAATCAGTGATAACTTC
TATGTCCGGGGTGATGGGACTAGGGCTTTCTATTTTTCTGATGAGTTTTTAATAAATCTC
TTCAATGGAAATGGTTTTGATGCTGAGGAGCACATCTTGTGTTTCAAGCAAGTGGAAAAT
CGGTCAAGGGAGTTGGTGATGAATAGGCGCTGGGTTCAAGCTGTATTCCGTGTTGGTAGT
GGAATATCTGCAGGGAAAACCGAAAGCAAGGTGAAATACCTTGGTAAGGATAATGATATA
CCTGAAATACCAAAAATTATCCTTGAAGACTCTGCAAATGAGACAGAAGTTGACATATCT
GAGGGAATGGCTCTTGAAATGTTCGGTATTTCATCTCCTAAGGAGGAGATTCTTGATGTC
ATCTCCAAAGACTATTCTTTCAAGATAAAGGTCCTCTCAAAAGAGTATCAGCATACCTGC
AAATCAACTGGCTTAATGTTATGGGAATCAGCTCGGCTTATGGCTTCTGTGCTTGCTGCT
AACCAGACCATTGTTTCAGGGAGAAGTGTTCTAGAGCTGGGTTGTGGATGTGCAGGCATT
TGCTCCATGGTTGCTGTTAGATCTGCTAACCTTGTGGTTACCACTGATGGAGACACAAAA
GCACTTGATCTGTTAAACCAGAATCTCGCTTTGAATCTCCAACCACCAATTCCTGCAAGG
CTAATTACAAAAAAGCTTGAGTGGGGAAACACAGACGATGTAGAGTCCATTAAGAGGCTA
AATGACAGAGGTTTCGATGTCATAATAGGCACAGATGTCTCTTATATTGCTGAAGCAATC
GCTCCTTTGTTTTCAACTGCTAAAGAGCTGATCCGACCCAGTAGAGGCGATGAGGAGGAT
AGTACACCAGCTCTAATCCTTTGTCATGTCATTCGCAGAGTTGATGAACCATCTATACTT
TCAACAGCGTCTGAATTTGGTTTCAGGTTGGTGGATAGGTGGCCTAATGCACTAACCTCA
ACTAGTACATCTCAGAACATAATCCAAAGTTGGTTCTCCGATGGCAGCCTTGAAACTTGT
ATTCCTACCACTGCACTGAATATTCTGTATTTCCACAAGTTGTAG

Peptide Sequence

PEP ID

Solyc08g062770.3.1
PEP Infomation

Methyltransferase (AHRD V3.3 *** F8WL68_CITUN)
Sequence

MEENKQPSSQKIQIYPTSTGEISPFWRDKYEKDAKKYWDIFYKRHQDKFFKDRHYLDKEW
GQYFSGIDEKVILEVGCGAGNTIFPLLATIPNIFVHACDFSPRAVNLVKSHKDFDDARVN
AFVCDPTVDDLIQHISPSSVDVVTMIFVLSAVSPEKMPLMLQNIRKVLKKDGCVLFRDYA
TGDLAQERLTSKEQKISDNFYVRGDGTRAFYFSDEFLINLFNGNGFDAEEHILCFKQVEN
RSRELVMNRRWVQAVFRVGSGISAGKTESKVKYLGKDNDIPEIPKIILEDSANETEVDIS
EGMALEMFGISSPKEEILDVISKDYSFKIKVLSKEYQHTCKSTGLMLWESARLMASVLAA
NQTIVSGRSVLELGCGCAGICSMVAVRSANLVVTTDGDTKALDLLNQNLALNLQPPIPAR
LITKKLEWGNTDDVESIKRLNDRGFDVIIGTDVSYIAEAIAPLFSTAKELIRPSRGDEED
STPALILCHVIRRVDEPSILSTASEFGFRLVDRWPNALTSTSTSQNIIQSWFSDGSLETC
IPTTALNILYFHKL*

Transcript Sequence

Transcript ID

Solyc08g062770.3.1
Transcript Infomation

Methyltransferase (AHRD V3.3 *** F8WL68_CITUN)
Sequence

AACCCCTTAATTCATTGTCCCCGACTCTTGAGTATACCGCAACTTCGTCGGGCCTTTTTG
AACTTCAATTGCCTTTCTGTTTTTTCTTTAAGCCTCTTAGCTACCAGAAAACTTTACTCC
TATCGAAAACCCTAAATCTTGACGGAAAAGGATATTCTCCAAGCTATAGAGTTGCAGGTT
TCGTAATGGAGGAAAATAAGCAGCCATCATCACAAAAGATACAGATATACCCCACCTCCA
CTGGTGAAATATCTCCTTTCTGGAGAGACAAGTACGAAAAAGATGCAAAGAAGTACTGGG
ATATCTTTTACAAGCGCCATCAAGATAAATTCTTTAAAGACAGGCATTACCTGGACAAGG
AATGGGGTCAATACTTCTCTGGGATTGACGAGAAAGTCATTCTTGAGGTTGGGTGTGGGG
CTGGAAATACCATCTTTCCTTTGCTTGCTACAATACCAAACATATTCGTCCATGCATGCG
ATTTTTCACCTCGAGCTGTGAACTTAGTTAAGTCGCACAAGGATTTTGACGATGCTCGGG
TGAATGCATTTGTCTGTGATCCAACAGTGGATGACCTGATCCAGCATATTTCTCCTTCAT
CAGTGGACGTTGTTACCATGATATTTGTTCTATCTGCAGTATCTCCTGAGAAGATGCCTC
TGATGTTACAAAACATCAGAAAAGTTCTGAAGAAAGATGGCTGTGTCTTATTTCGGGACT
ATGCAACTGGTGACCTTGCTCAGGAAAGGCTTACCTCCAAGGAACAAAAAATCAGTGATA
ACTTCTATGTCCGGGGTGATGGGACTAGGGCTTTCTATTTTTCTGATGAGTTTTTAATAA
ATCTCTTCAATGGAAATGGTTTTGATGCTGAGGAGCACATCTTGTGTTTCAAGCAAGTGG
AAAATCGGTCAAGGGAGTTGGTGATGAATAGGCGCTGGGTTCAAGCTGTATTCCGTGTTG
GTAGTGGAATATCTGCAGGGAAAACCGAAAGCAAGGTGAAATACCTTGGTAAGGATAATG
ATATACCTGAAATACCAAAAATTATCCTTGAAGACTCTGCAAATGAGACAGAAGTTGACA
TATCTGAGGGAATGGCTCTTGAAATGTTCGGTATTTCATCTCCTAAGGAGGAGATTCTTG
ATGTCATCTCCAAAGACTATTCTTTCAAGATAAAGGTCCTCTCAAAAGAGTATCAGCATA
CCTGCAAATCAACTGGCTTAATGTTATGGGAATCAGCTCGGCTTATGGCTTCTGTGCTTG
CTGCTAACCAGACCATTGTTTCAGGGAGAAGTGTTCTAGAGCTGGGTTGTGGATGTGCAG
GCATTTGCTCCATGGTTGCTGTTAGATCTGCTAACCTTGTGGTTACCACTGATGGAGACA
CAAAAGCACTTGATCTGTTAAACCAGAATCTCGCTTTGAATCTCCAACCACCAATTCCTG
CAAGGCTAATTACAAAAAAGCTTGAGTGGGGAAACACAGACGATGTAGAGTCCATTAAGA
GGCTAAATGACAGAGGTTTCGATGTCATAATAGGCACAGATGTCTCTTATATTGCTGAAG
CAATCGCTCCTTTGTTTTCAACTGCTAAAGAGCTGATCCGACCCAGTAGAGGCGATGAGG
AGGATAGTACACCAGCTCTAATCCTTTGTCATGTCATTCGCAGAGTTGATGAACCATCTA
TACTTTCAACAGCGTCTGAATTTGGTTTCAGGTTGGTGGATAGGTGGCCTAATGCACTAA
CCTCAACTAGTACATCTCAGAACATAATCCAAAGTTGGTTCTCCGATGGCAGCCTTGAAA
CTTGTATTCCTACCACTGCACTGAATATTCTGTATTTCCACAAGTTGTAG