Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g062700.3.1
CDS Infomation

Peptidyl-prolyl cis-trans isomerase, putative (AHRD V3.3 *** B9RQS7_RICCO)
Sequence

ATGTCGACAGTGTACGTTTTGGAACCGCCGACGAAGGGGAAAGTGGTACTTAACACGACG
TATGGGCCAATAGATATAGAACTATGGCCAAAAGAAGCACCAAAAGCTGTAAGGAATTTT
GTTCAATTATGTCTCGAAGGTTACTATGATAATACCATTTTTCATCGTGTTATCAAATCT
TTCCTTGCTCAAGGCGGTGACCCAACCGGCACCGGCACTGGTGGTGAAAGTATATATGGC
GGTGTGTTTCCTGATGAATTTCACTCCCGTTTAAGATTCAAACATAGGGGTTTGGTGGCA
TGTGCCGGTGCAGGCACACCAAATTCAAATGCTAGTCAATTCTTTATGACTTTGGATCGT
TGTGACTTTCTCGACAAGAAGCATACAATCTTTGGAAAAGTAACTGGGGATTCAATATAT
AATCTTATTACATTGGGTGAAGTTGAAACCGGCAAGGATGATCGGCCTGTTGATCCTCCA
CCTAAGATACTCTCTGTAGAGGTATTATGGAACCCTTTTGAGGATATTGTGCCAAGAGCA
AAGCCTGCAGAAGCTTTGCCTTCTGGAGTTGCAACTGAGAAGAAAGATGCAAAACAGAAA
GCTACCAAAAAGTTGAACTTGCTTTCATTTGGAGAAGAAGCAGAAGAGGAGGAGAAAGAG
CTTGTAGCTGTGAGTTCAAGGATAAGAAGCAGTCACGATGTCTTGGATGATCCACGTCTG
CTAAAGGATGGAAAGCATGATCAAGCTTTGGACTCATCTGAAGGAAAATCAACAAGGGAT
GTGCAGTTGACCATCAGAGAAGCTTTGGGATCAAAGAAGGAAGCGTCTCGTAAAGAATCT
GAAGCAGGTTTTCAAGAATCCCTTGACAACAGTGATGAAGATGAGGCTGGCTTTGATGCA
CGAATGCGTCAGCAGATACTAAAAAGGAGGAAAGAACTTGGCGATCCGACACCCAAACAG
AAGTTGCTCAGTGAGAACAGGAATGCAAGAAATCGTTCACCATCTCCTTCAAGGTCTGAT
GCTAAACATGATGATGACCAGCCAAAAGTGGATAAGTTGTCTCTAAAGAGAAAAGGTATA
GGCTCTGAAGCAAGAGCTGAACGTATGGCCAATGCAAATACAGACTTACAGTTGTTGTCT
GGCCCTGAACGAGAAAGACAGCTGCTAAAGCAAAAGAAACGAGGACGAAAAGGACACGAA
GAAGACATGCTAGCAAAATTGGAGAAATTTAAGGCTGGACTGTCTGCTAAAGCCAATGAA
TCTGCTAATGCTGTCAAGGAGGAAGAATTATCTGATTGGGCAGCAGTTACATTAAAATTC
ACTCCTGAACCTGGAAAGGACAAAATGTCTCGTAGTGAGGACCCCAATGATTACGTGGTA
CACGATCCTTTGTTGGAGAAAGGGAAAGAGAAGTTCAATAAAATGATGGCAAAGCAAAAG
CGACGAGAAAGAGAATGGGCTGGCAAATCTCTTACTTGA

Peptide Sequence

PEP ID

Solyc08g062700.3.1
PEP Infomation

Peptidyl-prolyl cis-trans isomerase, putative (AHRD V3.3 *** B9RQS7_RICCO)
Sequence

MSTVYVLEPPTKGKVVLNTTYGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRVIKS
FLAQGGDPTGTGTGGESIYGGVFPDEFHSRLRFKHRGLVACAGAGTPNSNASQFFMTLDR
CDFLDKKHTIFGKVTGDSIYNLITLGEVETGKDDRPVDPPPKILSVEVLWNPFEDIVPRA
KPAEALPSGVATEKKDAKQKATKKLNLLSFGEEAEEEEKELVAVSSRIRSSHDVLDDPRL
LKDGKHDQALDSSEGKSTRDVQLTIREALGSKKEASRKESEAGFQESLDNSDEDEAGFDA
RMRQQILKRRKELGDPTPKQKLLSENRNARNRSPSPSRSDAKHDDDQPKVDKLSLKRKGI
GSEARAERMANANTDLQLLSGPERERQLLKQKKRGRKGHEEDMLAKLEKFKAGLSAKANE
SANAVKEEELSDWAAVTLKFTPEPGKDKMSRSEDPNDYVVHDPLLEKGKEKFNKMMAKQK
RREREWAGKSLT*

Transcript Sequence

Transcript ID

Solyc08g062700.3.1
Transcript Infomation

Peptidyl-prolyl cis-trans isomerase, putative (AHRD V3.3 *** B9RQS7_RICCO)
Sequence

CATTTGGGAGCAGAGTTGAGAAAGAAGAAAACCTCCATAAATGTCGACAGTGTACGTTTT
GGAACCGCCGACGAAGGGGAAAGTGGTACTTAACACGACGTATGGGCCAATAGATATAGA
ACTATGGCCAAAAGAAGCACCAAAAGCTGTAAGGAATTTTGTTCAATTATGTCTCGAAGG
TTACTATGATAATACCATTTTTCATCGTGTTATCAAATCTTTCCTTGCTCAAGGCGGTGA
CCCAACCGGCACCGGCACTGGTGGTGAAAGTATATATGGCGGTGTGTTTCCTGATGAATT
TCACTCCCGTTTAAGATTCAAACATAGGGGTTTGGTGGCATGTGCCGGTGCAGGCACACC
AAATTCAAATGCTAGTCAATTCTTTATGACTTTGGATCGTTGTGACTTTCTCGACAAGAA
GCATACAATCTTTGGAAAAGTAACTGGGGATTCAATATATAATCTTATTACATTGGGTGA
AGTTGAAACCGGCAAGGATGATCGGCCTGTTGATCCTCCACCTAAGATACTCTCTGTAGA
GGTATTATGGAACCCTTTTGAGGATATTGTGCCAAGAGCAAAGCCTGCAGAAGCTTTGCC
TTCTGGAGTTGCAACTGAGAAGAAAGATGCAAAACAGAAAGCTACCAAAAAGTTGAACTT
GCTTTCATTTGGAGAAGAAGCAGAAGAGGAGGAGAAAGAGCTTGTAGCTGTGAGTTCAAG
GATAAGAAGCAGTCACGATGTCTTGGATGATCCACGTCTGCTAAAGGATGGAAAGCATGA
TCAAGCTTTGGACTCATCTGAAGGAAAATCAACAAGGGATGTGCAGTTGACCATCAGAGA
AGCTTTGGGATCAAAGAAGGAAGCGTCTCGTAAAGAATCTGAAGCAGGTTTTCAAGAATC
CCTTGACAACAGTGATGAAGATGAGGCTGGCTTTGATGCACGAATGCGTCAGCAGATACT
AAAAAGGAGGAAAGAACTTGGCGATCCGACACCCAAACAGAAGTTGCTCAGTGAGAACAG
GAATGCAAGAAATCGTTCACCATCTCCTTCAAGGTCTGATGCTAAACATGATGATGACCA
GCCAAAAGTGGATAAGTTGTCTCTAAAGAGAAAAGGTATAGGCTCTGAAGCAAGAGCTGA
ACGTATGGCCAATGCAAATACAGACTTACAGTTGTTGTCTGGCCCTGAACGAGAAAGACA
GCTGCTAAAGCAAAAGAAACGAGGACGAAAAGGACACGAAGAAGACATGCTAGCAAAATT
GGAGAAATTTAAGGCTGGACTGTCTGCTAAAGCCAATGAATCTGCTAATGCTGTCAAGGA
GGAAGAATTATCTGATTGGGCAGCAGTTACATTAAAATTCACTCCTGAACCTGGAAAGGA
CAAAATGTCTCGTAGTGAGGACCCCAATGATTACGTGGTACACGATCCTTTGTTGGAGAA
AGGGAAAGAGAAGTTCAATAAAATGATGGCAAAGCAAAAGCGACGAGAAAGAGAATGGGC
TGGCAAATCTCTTACTTGAGCTGATCTTCCAGCTGAAGAAACGACGGAATCGCTACTGTG
AAATTATTCGGCATTCATTTTGGAGGCTGGGCTGGCAAATCTCTTACTTGAGCTGATCTT
CCAGCTGAAGAAACGACGGAATCGCTACTGTGAAGTTATTCGGCATTCATTTTGGAGGCA
ATGATATTGGTTCCTCTCTTTGTGAACAAAGAATTTTGTACTGGGCCAAACTAGTTTGCT
GAAATCATGGCATTTTGATTATCAATATCCTCTTCCCAAAGAAGTTACAGAAGTGCCAAA
TCAAAATGTTCTCTGGTGTTGTTACTTTGTCTGTCCTGTGATATTTTTCTTTTTTAAAAT
GGACAGGAAATGTTGTAGCATGGTTTCAATGGAATGTGGAAATGAGTACTTGACAATGTA
AATATTTATTGTTCCCATTAAAAGAGGTCCAAGTCTTCTCATATGGACTACAAATATGGC
TTTAGCATGTTCTGTGAGTCAGCAGATGAAGCTATTTTTGGACCATATCCTTCTCTCCCT
AGACCATGCTTTCATCTCCCCTTTCC