Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g062360.3.1
CDS Infomation

Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN)
Sequence

ATGGATACTGAGAAGAGACTCTATGATGCTGCAGCTAAAGGAGATGTTAGAGTTTTACAA
GGATTACTTGAACAAGATGTTCTAATTCTTGATAGACTTGCCTTAACTTGCTTCAGTGAA
ACACCTTTGCACATAGCAGCACTGCGTGGTCATATCGAGTTTGTGAGGTTAATTCTTGCT
CAAAATCCTCAGCTTGCTGCTGATTTGGATTCGCGGAAGTTATCTGCTCTTCACATAGCT
TCAGCCAAAGGACATCTGGCTATCGTTAAGATGTTGTTGTTGGTAAATCCTGAAATATGC
CTGGCTTGTGATCGTGATGGTGCAAATCCTCTTCATCTTGCAGCTATCAAAGGTCGAGTT
GAAGTCATTAAGGAACTTATACATGTAAGGCCTCGTGCAGCTCTAGGAACGATGATCAAC
CGAGAAAACATTTTGCATTTGTGTGTGAAGCATAATCAGTTTGAGGTTCTGAAGGTTCTA
ATGGAGATCGAATGGGACCGTGAGTTCTTGAATGCAAAGGATGGTAATGGACACAACATT
CTGCATTTGGCTGTTGCTGATAAGCAAATTGAGACTGTCAAGTACTTGTTGAAGACACAT
CAAATTGATGTGAATGCAATGGATGCAAATGGGAATACATCATTAGATATCTTAGTACAG
AGTCGTAGGGACGTGAATGATCTATCCATTGGTGAATGTCTTCGAGAAGCTGGAGGTTTA
AGAGCAAAAGATATTTCAATGTCCATCATTCCCAATGACTCTGGCGGAAATAACGATCCT
CCAGTATCTTCAGCACCAGCATATTTAGGAGGAAATCAGGCGCCATCAAAAGGTGATTGG
CTTTCAAAGAAACGCGAGACAGTAATGGTGGTAGCCTCACTCATTGCAACCATGGCATTC
CAAGCTGGAGTGAACCCTCCAGGAGGTGTTTGGCAAGAAAATGAAAAATTGGATGATCCG
AGAACAGTACCCTTATTATATAAAGCAGGGGAATCAGTAATGGCTTATAATCATGCCAGA
CCATATCGATATTTCCTTCGTGTCAACACCATTGCTTTTGTCTCTTCTCTCAGCACAATC
TTGCTGCTGATAAGTGGATTGCCTTTCAGGCGCAGACTTTTTATGTGGGGTTTAATGGTT
ATAATGTGGTCAACAGTTACCACAATAGCACTCACTTATGGCATAGCAATTTACATCATC
ACGCCTAGGAAGGACAGTGAACCACTTGGTCAGATCATTGACATTGGAATAACAGTATGG
TGTGGCTTAATGGCACTACTTCTACTCGGTAACACAATACGTCTGTTGCGTGCATGGCAG
AAAAAGAAGCATGAAATAAGAAGAGCAGCAGTACAAAAATTTGTAAATTCAATTACTGTC
GATGTTTGA

Peptide Sequence

PEP ID

Solyc08g062360.3.1
PEP Infomation

Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN)
Sequence

MDTEKRLYDAAAKGDVRVLQGLLEQDVLILDRLALTCFSETPLHIAALRGHIEFVRLILA
QNPQLAADLDSRKLSALHIASAKGHLAIVKMLLLVNPEICLACDRDGANPLHLAAIKGRV
EVIKELIHVRPRAALGTMINRENILHLCVKHNQFEVLKVLMEIEWDREFLNAKDGNGHNI
LHLAVADKQIETVKYLLKTHQIDVNAMDANGNTSLDILVQSRRDVNDLSIGECLREAGGL
RAKDISMSIIPNDSGGNNDPPVSSAPAYLGGNQAPSKGDWLSKKRETVMVVASLIATMAF
QAGVNPPGGVWQENEKLDDPRTVPLLYKAGESVMAYNHARPYRYFLRVNTIAFVSSLSTI
LLLISGLPFRRRLFMWGLMVIMWSTVTTIALTYGIAIYIITPRKDSEPLGQIIDIGITVW
CGLMALLLLGNTIRLLRAWQKKKHEIRRAAVQKFVNSITVDV*

Transcript Sequence

Transcript ID

Solyc08g062360.3.1
Transcript Infomation

Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN)
Sequence

ATGGATACTGAGAAGAGACTCTATGATGCTGCAGCTAAAGGAGATGTTAGAGTTTTACAA
GGATTACTTGAACAAGATGTTCTAATTCTTGATAGACTTGCCTTAACTTGCTTCAGTGAA
ACACCTTTGCACATAGCAGCACTGCGTGGTCATATCGAGTTTGTGAGGTTAATTCTTGCT
CAAAATCCTCAGCTTGCTGCTGATTTGGATTCGCGGAAGTTATCTGCTCTTCACATAGCT
TCAGCCAAAGGACATCTGGCTATCGTTAAGATGTTGTTGTTGGTAAATCCTGAAATATGC
CTGGCTTGTGATCGTGATGGTGCAAATCCTCTTCATCTTGCAGCTATCAAAGGTCGAGTT
GAAGTCATTAAGGAACTTATACATGTAAGGCCTCGTGCAGCTCTAGGAACGATGATCAAC
CGAGAAAACATTTTGCATTTGTGTGTGAAGCATAATCAGTTTGAGGTTCTGAAGGTTCTA
ATGGAGATCGAATGGGACCGTGAGTTCTTGAATGCAAAGGATGGTAATGGACACAACATT
CTGCATTTGGCTGTTGCTGATAAGCAAATTGAGACTGTCAAGTACTTGTTGAAGACACAT
CAAATTGATGTGAATGCAATGGATGCAAATGGGAATACATCATTAGATATCTTAGTACAG
AGTCGTAGGGACGTGAATGATCTATCCATTGGTGAATGTCTTCGAGAAGCTGGAGGTTTA
AGAGCAAAAGATATTTCAATGTCCATCATTCCCAATGACTCTGGCGGAAATAACGATCCT
CCAGTATCTTCAGCACCAGCATATTTAGGAGGAAATCAGGCGCCATCAAAAGGTGATTGG
CTTTCAAAGAAACGCGAGACAGTAATGGTGGTAGCCTCACTCATTGCAACCATGGCATTC
CAAGCTGGAGTGAACCCTCCAGGAGGTGTTTGGCAAGAAAATGAAAAATTGGATGATCCG
AGAACAGTACCCTTATTATATAAAGCAGGGGAATCAGTAATGGCTTATAATCATGCCAGA
CCATATCGATATTTCCTTCGTGTCAACACCATTGCTTTTGTCTCTTCTCTCAGCACAATC
TTGCTGCTGATAAGTGGATTGCCTTTCAGGCGCAGACTTTTTATGTGGGGTTTAATGGTT
ATAATGTGGTCAACAGTTACCACAATAGCACTCACTTATGGCATAGCAATTTACATCATC
ACGCCTAGGAAGGACAGTGAACCACTTGGTCAGATCATTGACATTGGAATAACAGTATGG
TGTGGCTTAATGGCACTACTTCTACTCGGTAACACAATACGTCTGTTGCGTGCATGGCAG
AAAAAGAAGCATGAAATAAGAAGAGCAGCAGTACAAAAATTTGTAAATTCAATTACTGTC
GATGTTTGATTTGTTGCATTCATAAATAGGACACAGCCATTAGAAGAAATAATAATAACT
ATTTTTTTTGAATCTA