Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g061970.3.1
CDS Infomation

putative spermine synthase
Sequence

ATGGGTAGTGAAGCTTTGGAATTTTTTTCTTGTGCTAATAATAATAATAATAACAATGGT
TTTTCCTATGAACCAAAAAAGAACATAATTATGGAAGAAACTGATAATCTTTCCATTAAT
ATTCACGATGGTTCTTGGTTTGAAGAAGAGATTGATGTTGATCTCAAATGGTCTTTTGCT
TTGAACAGTGTGCTGCACAAAGGAACGAGCGAGTACCAAGATATTGCTCTTTTGGACACC
AAGCACTTTGGAAAGATATTGGTGATAGATGGGAAGATGCAGAGTGCAGAAGTGGATGAA
TTTATATATCATGAATGTCTCATTCATCCAGCTCTCTTATGTCACCCAAACCCCAAAAAT
GTGTTCATAATGGGAGGTGGTGAAGGATCTGCAGCAAGGGAAGCTCTTAGACACAAATCT
ATGGAGAAAGTTGTCATGTGTGACATTGATAAGGAGGTTGTTGATTTCTGCAAGAAACAT
CTAACGGCAAACCATGAGGCTTTTCTTAACAAGAAGCTTAACTTGGTCATTAACGATGCC
AAAGCTGAGCTAGAGCAGAGGCAAGAAAAGTTTGATATCATAGTTGGGGATTTAGCTGAT
CCAGTTGAAGGAGGACCTTGTTATCAACTCTATACCAAATCTTTCTATCAAAATATCCTT
AAACCTAAGCTTAATGATACTGGCATCTTCGTAACTCAGGCTGGACCAGCAGGGGTTTTT
ACACACAAGGAAGTTTTCTCATCCATTTACAACACAACCAAGCAGGTTTTCAAATATGTG
CTGGCATATACAGCTCATGTACCCTCATTTGCTGATACTTGGGGATGGGTTATGGCTTCT
GATAAACCATTTTGTCTTGATGCTGGAAAATTGGACAAGAAAATAGCAGAAAGAATCGAA
GGAGAATTGTTATATCTTAATGGTGCTTCATTCTTCTCTTCCACCATCTTGAACAAGACC
GTTGCCAAAACGTTGAAGAATGAGAGTCATGTGTATGCTGAAGATGATGCAAGGTTCATT
CATGGACATGGATTGGGATTTAGAAATTGA

Peptide Sequence

PEP ID

Solyc08g061970.3.1
PEP Infomation

putative spermine synthase
Sequence

MGSEALEFFSCANNNNNNNGFSYEPKKNIIMEETDNLSINIHDGSWFEEEIDVDLKWSFA
LNSVLHKGTSEYQDIALLDTKHFGKILVIDGKMQSAEVDEFIYHECLIHPALLCHPNPKN
VFIMGGGEGSAAREALRHKSMEKVVMCDIDKEVVDFCKKHLTANHEAFLNKKLNLVINDA
KAELEQRQEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLNDTGIFVTQAGPAGVF
THKEVFSSIYNTTKQVFKYVLAYTAHVPSFADTWGWVMASDKPFCLDAGKLDKKIAERIE
GELLYLNGASFFSSTILNKTVAKTLKNESHVYAEDDARFIHGHGLGFRN*

Transcript Sequence

Transcript ID

Solyc08g061970.3.1
Transcript Infomation

putative spermine synthase
Sequence

GTATCATCCCTCACACCAAACTTGTTTTTATCAATCCTTGCTCCCACACGTTTCTCTACT
AAGATATATAAACTAATATCCTTCTTCTTTAATTTTTATATAAGTTTTAAGAGCTCTATG
GGTAGTGAAGCTTTGGAATTTTTTTCTTGTGCTAATAATAATAATAATAACAATGGTTTT
TCCTATGAACCAAAAAAGAACATAATTATGGAAGAAACTGATAATCTTTCCATTAATATT
CACGATGGTTCTTGGTTTGAAGAAGAGATTGATGTTGATCTCAAATGGTCTTTTGCTTTG
AACAGTGTGCTGCACAAAGGAACGAGCGAGTACCAAGATATTGCTCTTTTGGACACCAAG
CACTTTGGAAAGATATTGGTGATAGATGGGAAGATGCAGAGTGCAGAAGTGGATGAATTT
ATATATCATGAATGTCTCATTCATCCAGCTCTCTTATGTCACCCAAACCCCAAAAATGTG
TTCATAATGGGAGGTGGTGAAGGATCTGCAGCAAGGGAAGCTCTTAGACACAAATCTATG
GAGAAAGTTGTCATGTGTGACATTGATAAGGAGGTTGTTGATTTCTGCAAGAAACATCTA
ACGGCAAACCATGAGGCTTTTCTTAACAAGAAGCTTAACTTGGTCATTAACGATGCCAAA
GCTGAGCTAGAGCAGAGGCAAGAAAAGTTTGATATCATAGTTGGGGATTTAGCTGATCCA
GTTGAAGGAGGACCTTGTTATCAACTCTATACCAAATCTTTCTATCAAAATATCCTTAAA
CCTAAGCTTAATGATACTGGCATCTTCGTAACTCAGGCTGGACCAGCAGGGGTTTTTACA
CACAAGGAAGTTTTCTCATCCATTTACAACACAACCAAGCAGGTTTTCAAATATGTGCTG
GCATATACAGCTCATGTACCCTCATTTGCTGATACTTGGGGATGGGTTATGGCTTCTGAT
AAACCATTTTGTCTTGATGCTGGAAAATTGGACAAGAAAATAGCAGAAAGAATCGAAGGA
GAATTGTTATATCTTAATGGTGCTTCATTCTTCTCTTCCACCATCTTGAACAAGACCGTT
GCCAAAACGTTGAAGAATGAGAGTCATGTGTATGCTGAAGATGATGCAAGGTTCATTCAT
GGACATGGATTGGGATTTAGAAATTGAGTTTCTGATGGGGGAACTGTACAGCCAAATGTT
TGGGAAACAAAGGAATATGAATTGTTGAAACATTAATGTTTTCTTAAAGATATTTGTTAT
TTAGTAGCTTTTGATTTGGTCAGCAGTATAGGCTTAGGCTGCTCTTCTGATTGTCCAATC
ACTATATATTTACTATTTCATGTAATGCCAAGATTTGAAAAGAAGAAGAATCAATTTCCA
TCACATGTCTTCTTTTTGTTGTGTTTAATTACTCCCAAGAACCCCTTCACAATTTATTAA
TTCATTCTATC