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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g061480.3.1
CDS Infomation

Chalcone--flavonone isomerase (AHRD V3.3 *** A0A1D1XWC4_9ARAE)
Sequence

ATGCGGAACAATTTCATGGATGGTGATTGGGGTTCATCAGAAATGTTCCCAATTGATCCT
CTTATGCCGTATGGATTTGGAGCCAATTTCCTCTCTCATTTATCATTGATTGTTGATGGT
TCTAGAAATTTATATGTGCCTGGAAGTCAGGCACTTCAAGAAGCATTTAAGTGCTTTTCA
AAATATGCTGGGGCACTGCTAGTTTGGTTTGCCACCGTAACAAACTCCAGAGGTAATAAC
CAAATATCAGGCGGTTATCGAAGTTCAAGAAATACAAGGTCTGGAATGTCAATTCAAACA
CAAGAAACAACTTCAAGTAGACATTATTTTATGGAACTCTTCTGGCAATCAAGATGCAAA
GGGAAAATTATTATCCCTGTGATATTTAGGAGGATTTCAAAGTTCACTGTGAATCAAATG
TACAAAGAAGCAAAACATCTTCAATCAATTCCTGTTCTCTCACTAGCTGCTGCTTTAGTA
CCTCCATTTGAAAATTTTGCTATGGAATCACACAGTGGTGAGGATCACCGGCCCTGTGAG
GTAGATCACCGGGGATGTGATAATTCATTTTTCCAGAATTTAAATTGGTCTAGACATGCA
GTTGAGCCCAGAACGGGTATTGAGTTTCCTACTATCTTGGACAACCTAATAGCTGGGGAG
CAAAATTCCAGTTTCACATCAGAGGTCCTTGTTGGGACTGGATCCAGAATAATGAAAATT
ATCAGAATCAAATCTCTAAAGGTTTATGCATTTGGTTTCTATGTGCATCCTTTTGATGTC
TGCCAGAAGTTGGGTTGGAAATATGCCTCAGTTCCTTTTTGTGAACTGAACAAACAACAA
GATTTTTATCAGGATCTTCTCAGGGAAGACATAAGCATGACTGTAAGGCTTGTTGTTAGC
TGCAATGGAATCAAAATCAACACAGTTCGAGATGTCTTTGAGAAATCTCTTCGAGCTCGG
TTGTTCAAGGCAAATCCTGACACCGATTATCACTGTCTAGAAACATTTGGTTCTATGTTC
TCTCAGGATATTCCTATACATGCAGGTACAACAATCAATTTTCGACGAACAACTGATGGA
CATTTAATTACTGAGATCGGAGGCAACCATATTGGAGCAGTTCAGAGTAGAGAATTGTGT
AGGGCAATTTTTGATATGTACATTGGTGATGTTCCTATATGTGAGGATACAAAAGAAGAG
ATCGGGAAAAATGTTGCAAGTATAATTAGGGGGTGTTAA

Peptide Sequence

PEP ID

Solyc08g061480.3.1
PEP Infomation

Chalcone--flavonone isomerase (AHRD V3.3 *** A0A1D1XWC4_9ARAE)
Sequence

MRNNFMDGDWGSSEMFPIDPLMPYGFGANFLSHLSLIVDGSRNLYVPGSQALQEAFKCFS
KYAGALLVWFATVTNSRGNNQISGGYRSSRNTRSGMSIQTQETTSSRHYFMELFWQSRCK
GKIIIPVIFRRISKFTVNQMYKEAKHLQSIPVLSLAAALVPPFENFAMESHSGEDHRPCE
VDHRGCDNSFFQNLNWSRHAVEPRTGIEFPTILDNLIAGEQNSSFTSEVLVGTGSRIMKI
IRIKSLKVYAFGFYVHPFDVCQKLGWKYASVPFCELNKQQDFYQDLLREDISMTVRLVVS
CNGIKINTVRDVFEKSLRARLFKANPDTDYHCLETFGSMFSQDIPIHAGTTINFRRTTDG
HLITEIGGNHIGAVQSRELCRAIFDMYIGDVPICEDTKEEIGKNVASIIRGC*

Transcript Sequence

Transcript ID

Solyc08g061480.3.1
Transcript Infomation

Chalcone--flavonone isomerase (AHRD V3.3 *** A0A1D1XWC4_9ARAE)
Sequence

GACTCTTGTTTTAATATTTAAAATTTATATTAAATTTAAATAATTTAATTCATTTGAAAG
TGAATTTTTAACACAATTTAATATAGAGCTTTCACCGCATCACGAGGAAAGAGGAGAGAA
GGGTCGGTGATAGACTCAATTCCAATAGGGAATGAATATGAACACAAATGTTGGGCGAGA
GGTTGAATGTTGAACAAATTTCACCTCTAATTCAACATGCGGCTTTCCCTTTTTTTCTTT
AAATTTCCAATATTATATTCTTCTTATGATTCATTCCATTTATAATAAAAAGGTGGAACA
ATAAAGATACCTTTTTTCTCGTTTCTTTTCTAGAACCATAAAGCATATTCTTTCCTTTAA
GGGGATAATTAACAAACTCATTCATAAACCCTAACGTACTTTAATCTCAATCCAAGAATC
TTTTTTTTTTCTTGATCCACTCACATTTTCAGGTGATTTCTGCCCGTATCGGTAGTGATA
GGGGGGCTATAAGGCCCTTGTAGGAACTGATAACTAAAAATGCGGAACAATTTCATGGAT
GGTGATTGGGGTTCATCAGAAATGTTCCCAATTGATCCTCTTATGCCGTATGGATTTGGA
GCCAATTTCCTCTCTCATTTATCATTGATTGTTGATGGTTCTAGAAATTTATATGTGCCT
GGAAGTCAGGCACTTCAAGAAGCATTTAAGTGCTTTTCAAAATATGCTGGGGCACTGCTA
GTTTGGTTTGCCACCGTAACAAACTCCAGAGGTAATAACCAAATATCAGGCGGTTATCGA
AGTTCAAGAAATACAAGGTCTGGAATGTCAATTCAAACACAAGAAACAACTTCAAGTAGA
CATTATTTTATGGAACTCTTCTGGCAATCAAGATGCAAAGGGAAAATTATTATCCCTGTG
ATATTTAGGAGGATTTCAAAGTTCACTGTGAATCAAATGTACAAAGAAGCAAAACATCTT
CAATCAATTCCTGTTCTCTCACTAGCTGCTGCTTTAGTACCTCCATTTGAAAATTTTGCT
ATGGAATCACACAGTGGTGAGGATCACCGGCCCTGTGAGGTAGATCACCGGGGATGTGAT
AATTCATTTTTCCAGAATTTAAATTGGTCTAGACATGCAGTTGAGCCCAGAACGGGTATT
GAGTTTCCTACTATCTTGGACAACCTAATAGCTGGGGAGCAAAATTCCAGTTTCACATCA
GAGGTCCTTGTTGGGACTGGATCCAGAATAATGAAAATTATCAGAATCAAATCTCTAAAG
GTTTATGCATTTGGTTTCTATGTGCATCCTTTTGATGTCTGCCAGAAGTTGGGTTGGAAA
TATGCCTCAGTTCCTTTTTGTGAACTGAACAAACAACAAGATTTTTATCAGGATCTTCTC
AGGGAAGACATAAGCATGACTGTAAGGCTTGTTGTTAGCTGCAATGGAATCAAAATCAAC
ACAGTTCGAGATGTCTTTGAGAAATCTCTTCGAGCTCGGTTGTTCAAGGCAAATCCTGAC
ACCGATTATCACTGTCTAGAAACATTTGGTTCTATGTTCTCTCAGGATATTCCTATACAT
GCAGGTACAACAATCAATTTTCGACGAACAACTGATGGACATTTAATTACTGAGATCGGA
GGCAACCATATTGGAGCAGTTCAGAGTAGAGAATTGTGTAGGGCAATTTTTGATATGTAC
ATTGGTGATGTTCCTATATGTGAGGATACAAAAGAAGAGATCGGGAAAAATGTTGCAAGT
ATAATTAGGGGGTGTTAAAAAGATGGGGTGCTTCTACAAGAGCTTATTTGCTTGTAATAG
TTCAGGTTCTTGTGAACTGGACTTTTTCATAGTGCAGTTCATAGCGTCTCGAGTAAGACA
TAAATCTCAGAATGAACATAGGTTTCATGAGGATAAATGATTGTTAGTCTTATATATGTA
GAATTATTTATTTTAGGCAGGGTTCTTATATTCAAAATTGATTAGAATACAAGATTTCTT
GTAACCTTGTTGGCGAGCTGCCATTACAGAGCTGCCCCTCTGCCAACTGTTGTAAATGAA
AAGAGAGCTTGTTCTGCATTTTTTGGGCTTAAGCTTCTCTCATATTCTGTATAATATTTG
GTTGATCTTGTCAAGTGATTTGTAGTATTATAAAAATATGCTAGTTAGATAGAATATAAA
CTAATATGTATAAGAATTATAGGATTGGTTGTTGTGGGCAGCAACATGGCTGCAAATATA
GGCCAACATACTTCAAATTCATT