Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g061450.2.1
CDS Infomation

exosome complex exonuclease (AHRD V3.3 *** AT5G25500.1)
Sequence

ATGGGAATGTGTAGCGTGAGGAGGAACCTTATACCTCGAGCTAAGATGTTGACAGCCAAG
ATTAGTGGGGTGATGCGGTTTCATCACTGCTCAGAGGAATTCCAGGACGAGTCTTTGTCT
TCCGAATGGTACGTGAAAGCTTTCTCAAAATTAACAAAATTGAACCTTTTGCTGAAAAAT
GTGGACTTAGTTGATGGGAAGTTAGTAAATGTTAGTGATCACTCAAGAGTGTATGATGAA
AGTTTGGAACAAAAGTTATCTTATTTTAAATCACTGGCTAGGACCTTTATTGGGTGTCCA
TCAATGCAAGAAATGATGAATAAGAATGTGGCACAAGCATTAGCTGATGTACAATGTGAT
CAGCCTGTCTGTTTCAGTAAAGATAGCGAGAGGGAATCAATTACAGTTGATTCCCTTGCA
AAAATTTCAAACTTCCTGAATGTTTCTGCACAACAAAGGAAACTTGTCAGGCAATCAATA
TGTGCACAGGTTACAAAGTACCCCGTATGGACAGGGACAGTTGAGGAGATATTGAATGGA
CTAAAATCTAATATTGATTTTCTAAATTATAGATGTCCGAATAAAGATATTAGAATGGCT
CAACAAATAGTTACAACTTGTCAAAAGTATTTAGAGAATGCAACTTCTTATGACCCTGAA
TCCAATTCATGGATGCGCATCGTACCTGCAAAAGGTGTGGAGTCACCTGCTTCCCATAAG
TGGGAAGGTGTTCTGGAAATGTTCGGCGACCTTATTGATTGTTTGAGTGAAGAGAAAAGA
TTAACTTCGGAGGTAAAGAAGCTTGAGGTCATGAAAGAGGGGCTTCATCAGATTAAGGAT
GTTTTCATAGACAAAAACATTGGATTTAAGGAAGCTTGCTATCAGGAGAGTTTAGTGCAT
AAAAAGTTGATTAAGACATTGGGACACTCATCACGCATCTGGGATGTTGATATTGAAGTA
TGTGGAGGGCTTTATCCAATTGGTCGTGGGGATAAGTTTCGTCTGTGCATGGGAAAGATC
CTAACGTCTGATGAGCAGAATATGCTGCAGAGCGGGGTAAAGCAGCTAAGCAGAGCTCTG
GGGCTTTTCAAGTTTGTATGGGAAACAGCAGGAATGAAAGGCGACCTTGAAGGAAAGCTA
GAAATGTGGAAGATGCATTCATCAATGTGTATAGTAGGCTGTTCCACGAGCCTAAAAGAT
GACGTGATAGGGTACAATTATGTTTACAAGGTGAAGTTCCATAAAAGTCGAAACACCAGC
CTAAAGTACTCTGGAAGTGATGTTCAACATGTCAATCCCTATAGGTCTTCTGAGAAAGAG
AGCACCCTTCTGTTTAAATCTAGCTTCCATCCCTTTTCGAGATGCTACAAGATTTTGCAT
CGTCTCATTTACGTCAGGAAGATGGCATCTCAGGATTCTAGCGTTTGGAAATATGATAGG
ACTGGAGTAACTGATGGTAGTATTGGGTCAAGTAGAAATTCACCTGTATTGGCTAAGCTC
TTACAATGGTAG

Peptide Sequence

PEP ID

Solyc08g061450.2.1
PEP Infomation

exosome complex exonuclease (AHRD V3.3 *** AT5G25500.1)
Sequence

MGMCSVRRNLIPRAKMLTAKISGVMRFHHCSEEFQDESLSSEWYVKAFSKLTKLNLLLKN
VDLVDGKLVNVSDHSRVYDESLEQKLSYFKSLARTFIGCPSMQEMMNKNVAQALADVQCD
QPVCFSKDSERESITVDSLAKISNFLNVSAQQRKLVRQSICAQVTKYPVWTGTVEEILNG
LKSNIDFLNYRCPNKDIRMAQQIVTTCQKYLENATSYDPESNSWMRIVPAKGVESPASHK
WEGVLEMFGDLIDCLSEEKRLTSEVKKLEVMKEGLHQIKDVFIDKNIGFKEACYQESLVH
KKLIKTLGHSSRIWDVDIEVCGGLYPIGRGDKFRLCMGKILTSDEQNMLQSGVKQLSRAL
GLFKFVWETAGMKGDLEGKLEMWKMHSSMCIVGCSTSLKDDVIGYNYVYKVKFHKSRNTS
LKYSGSDVQHVNPYRSSEKESTLLFKSSFHPFSRCYKILHRLIYVRKMASQDSSVWKYDR
TGVTDGSIGSSRNSPVLAKLLQW*

Transcript Sequence

Transcript ID

Solyc08g061450.2.1
Transcript Infomation

exosome complex exonuclease (AHRD V3.3 *** AT5G25500.1)
Sequence

ATGGGAATGTGTAGCGTGAGGAGGAACCTTATACCTCGAGCTAAGATGTTGACAGCCAAG
ATTAGTGGGGTGATGCGGTTTCATCACTGCTCAGAGGAATTCCAGGACGAGTCTTTGTCT
TCCGAATGGTACGTGAAAGCTTTCTCAAAATTAACAAAATTGAACCTTTTGCTGAAAAAT
GTGGACTTAGTTGATGGGAAGTTAGTAAATGTTAGTGATCACTCAAGAGTGTATGATGAA
AGTTTGGAACAAAAGTTATCTTATTTTAAATCACTGGCTAGGACCTTTATTGGGTGTCCA
TCAATGCAAGAAATGATGAATAAGAATGTGGCACAAGCATTAGCTGATGTACAATGTGAT
CAGCCTGTCTGTTTCAGTAAAGATAGCGAGAGGGAATCAATTACAGTTGATTCCCTTGCA
AAAATTTCAAACTTCCTGAATGTTTCTGCACAACAAAGGAAACTTGTCAGGCAATCAATA
TGTGCACAGGTTACAAAGTACCCCGTATGGACAGGGACAGTTGAGGAGATATTGAATGGA
CTAAAATCTAATATTGATTTTCTAAATTATAGATGTCCGAATAAAGATATTAGAATGGCT
CAACAAATAGTTACAACTTGTCAAAAGTATTTAGAGAATGCAACTTCTTATGACCCTGAA
TCCAATTCATGGATGCGCATCGTACCTGCAAAAGGTGTGGAGTCACCTGCTTCCCATAAG
TGGGAAGGTGTTCTGGAAATGTTCGGCGACCTTATTGATTGTTTGAGTGAAGAGAAAAGA
TTAACTTCGGAGGTAAAGAAGCTTGAGGTCATGAAAGAGGGGCTTCATCAGATTAAGGAT
GTTTTCATAGACAAAAACATTGGATTTAAGGAAGCTTGCTATCAGGAGAGTTTAGTGCAT
AAAAAGTTGATTAAGACATTGGGACACTCATCACGCATCTGGGATGTTGATATTGAAGTA
TGTGGAGGGCTTTATCCAATTGGTCGTGGGGATAAGTTTCGTCTGTGCATGGGAAAGATC
CTAACGTCTGATGAGCAGAATATGCTGCAGAGCGGGGTAAAGCAGCTAAGCAGAGCTCTG
GGGCTTTTCAAGTTTGTATGGGAAACAGCAGGAATGAAAGGCGACCTTGAAGGAAAGCTA
GAAATGTGGAAGATGCATTCATCAATGTGTATAGTAGGCTGTTCCACGAGCCTAAAAGAT
GACGTGATAGGGTACAATTATGTTTACAAGGTGAAGTTCCATAAAAGTCGAAACACCAGC
CTAAAGTACTCTGGAAGTGATGTTCAACATGTCAATCCCTATAGGTCTTCTGAGAAAGAG
AGCACCCTTCTGTTTAAATCTAGCTTCCATCCCTTTTCGAGATGCTACAAGATTTTGCAT
CGTCTCATTTACGTCAGGAAGATGGCATCTCAGGATTCTAGCGTTTGGAAATATGATAGG
ACTGGAGTAACTGATGGTAGTATTGGGTCAAGTAGAAATTCACCTGTATTGGCTAAGCTC
TTACAATGGTAG