Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g061140.3.1
CDS Infomation	overexpressor of cationic peroxidase 3 (AHRD V3.3 *** AT5G11270.1)
Sequence	ATGGCGTCTTCTTCCACAACTCTGGGCATTTCCATTAGACTTGGATGTTCCAGCAATGAA CATCTCATGTTGGTTCATCCCAGAAGCAGAACTAACATCGCCTTGCTATTTCATTCTTAT TCCTCTCGTCTTGTTACTTTCTCTCGCCGTCGAAACAATTCTGCTATCACTTCTTCCAAC AAAAAGAAAAAGAGTCCACCTAGGAAAGATACGGAGGAAGTTGGTGATATAGATGAAGAT GCTTTTGAGGCACTCTTTCAGCTGCTGGAAGAAGATCTGAAAAATGATGAGCTATCCTTG GACGATGATGATATAACTGAGGAGGACCTTGCGAAGCTTGAACGTGAATTGGAGGAAGCA CTGAAGGATGATGAACTACTAGGAGAAATTGACTCAATTGCCAATGAGAACACTGAAAGT AGTATGGCTAAAGATGAAGAAGCAGTAGCAGAAGATGCCAATGGAGATGATGATGATGAA GATGTAGATATGCTAGTGAAATTGAAAAATTGGCAACTTAAGAAACTGGCATATGCCTTG AAAAAGGGACGGCGTAAGTTAAATATAAAGAATCTTGCTGCTGACCTATGCCTTGATAGA GCTGTTGTTCTTGAAATGCTTCGCAATCCTCCACCAAATCTTGTGTTACTGAGTGCTGCC TTACCTGATGAACCTGTTCCCAGAATGTTAGAGGCTGCAAGCAAACCCCTGGAGACTGTT CCCATCGAGATGAGTGATGCTGTGAAGCCAGATGCTAAGGTGGAAACGCCAGTTCATGTG ATGCAAAGTAACTGGTCTGCTCAAAAGAGACTAAAGAAAGTTCAATTGGAAACCCTTGAA CAAGTTTATAGACGATCGAAGCGGCCCACTAATGCCATGATTAGCAGCATTGTGCATGTA ACAAATCTGCCTCGGAGAAGAGTTCTAAAATGGTTTGAAGAAAGACGGTCTGAAGAAGGG GTTCCTGCTCATCGACTTCCATACCAACCATCCTCTATATCTGAATAG

Peptide Sequence

PEP ID	Solyc08g061140.3.1
PEP Infomation	overexpressor of cationic peroxidase 3 (AHRD V3.3 *** AT5G11270.1)
Sequence	MASSSTTLGISIRLGCSSNEHLMLVHPRSRTNIALLFHSYSSRLVTFSRRRNNSAITSSN KKKKSPPRKDTEEVGDIDEDAFEALFQLLEEDLKNDELSLDDDDITEEDLAKLERELEEA LKDDELLGEIDSIANENTESSMAKDEEAVAEDANGDDDDEDVDMLVKLKNWQLKKLAYAL KKGRRKLNIKNLAADLCLDRAVVLEMLRNPPPNLVLLSAALPDEPVPRMLEAASKPLETV PIEMSDAVKPDAKVETPVHVMQSNWSAQKRLKKVQLETLEQVYRRSKRPTNAMISSIVHV TNLPRRRVLKWFEERRSEEGVPAHRLPYQPSSISE*

Transcript Sequence

Transcript ID	Solyc08g061140.3.1
Transcript Infomation	overexpressor of cationic peroxidase 3 (AHRD V3.3 *** AT5G11270.1)
Sequence	GAATTGAGATAGGCCTTGAAGAATTTGAGAAAGTAGAGAATGGCGTCTTCTTCCACAACT CTGGGCATTTCCATTAGACTTGGATGTTCCAGCAATGAACATCTCATGTTGGTTCATCCC AGAAGCAGAACTAACATCGCCTTGCTATTTCATTCTTATTCCTCTCGTCTTGTTACTTTC TCTCGCCGTCGAAACAATTCTGCTATCACTTCTTCCAACAAAAAGAAAAAGAGTCCACCT AGGAAAGATACGGAGGAAGTTGGTGATATAGATGAAGATGCTTTTGAGGCACTCTTTCAG CTGCTGGAAGAAGATCTGAAAAATGATGAGCTATCCTTGGACGATGATGATATAACTGAG GAGGACCTTGCGAAGCTTGAACGTGAATTGGAGGAAGCACTGAAGGATGATGAACTACTA GGAGAAATTGACTCAATTGCCAATGAGAACACTGAAAGTAGTATGGCTAAAGATGAAGAA GCAGTAGCAGAAGATGCCAATGGAGATGATGATGATGAAGATGTAGATATGCTAGTGAAA TTGAAAAATTGGCAACTTAAGAAACTGGCATATGCCTTGAAAAAGGGACGGCGTAAGTTA AATATAAAGAATCTTGCTGCTGACCTATGCCTTGATAGAGCTGTTGTTCTTGAAATGCTT CGCAATCCTCCACCAAATCTTGTGTTACTGAGTGCTGCCTTACCTGATGAACCTGTTCCC AGAATGTTAGAGGCTGCAAGCAAACCCCTGGAGACTGTTCCCATCGAGATGAGTGATGCT GTGAAGCCAGATGCTAAGGTGGAAACGCCAGTTCATGTGATGCAAAGTAACTGGTCTGCT CAAAAGAGACTAAAGAAAGTTCAATTGGAAACCCTTGAACAAGTTTATAGACGATCGAAG CGGCCCACTAATGCCATGATTAGCAGCATTGTGCATGTAACAAATCTGCCTCGGAGAAGA GTTCTAAAATGGTTTGAAGAAAGACGGTCTGAAGAAGGGGTTCCTGCTCATCGACTTCCA TACCAACCATCCTCTATATCTGAATAGTACTTTCCTTGTAAATACCAGCTAAAAGAAGTA GTTTCTACATGTGGAACTGGGATACCAGAATTATTTGATACGGTCACAGCTTCCTTTGGC TATTCGTCTTACTGAAGCTATAACAATAGCAATATCCTCTGTAAGGAAAAGACGGTGATC AACAAAAAGAAATGAACATCTTTACAGCTTTTGTCTGTTCCTATCTTCTTTAGCTCCATT GAGTCTAACTATGTATACATTTTTTCTTACATTCCAGCATACTTCGTTAATAAAAGGGAT ATTGTAATAATATAATTAAACATGGTGACCTAAGTATTTTGAATTTCAATGTAATAGGCA GTAAAAATAAAGCTAAAAATATAAAATAAAATTGTAATAGCCAGTAATATAGATAGACGA TAGTAATGTATTTCATGTATTAATCTTCTATTTCATAATAACTGTATCCTAATTTAATTA TTTAGTTTATAAAATGAAAAGAATTTTATTATATA