Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g043170.3.1
CDS Infomation	delta 1-pyrroline-5-carboxylate synthetase
Sequence	ATGGAGACAGTTGATTCAACTCGAGCATTTGTGAAGAACGTCAAACGACTCATTGTCAAG GTTGGGACTGCAGTTGTGACTCGAGCTGATGGAAGATTAGCACTTGGAAGATTAGGAGCC CTCTGTGAGCAGCTTCAGGAGCTTAATTCGCAAGGGTATGAAGTTATTTTGGTGACTTCT GGTGCTGTAGGTGTTGGTCGTCAGCGGCTTAGATATAGGAAGTTGCTCAACAGCAGTTTT CTTGATCTTCAAAAGCCACAAACTGAGCTTGATGGCAAGGCTTGTGCTGCTGTGGGCCAG AATGGCCTCATGGCTCTGTATGATTCTTTGTTCAGTCAGTTGGATGTGACATCAGCTCAG CTTCTGGTGACTGATAATGACTTTAGAGATCCAGATTTTAGGAGACAACTCAATGACACA GTAAATTCGTTGCTTTCTCTAAAAGTTATACCTATATTCAATGAGAATGATGCTATCAGT ACGCGGAGAGCTCCTTATGAGGACTCTTCTGGAATATTTTGGGATAATGACAGTCTGGCA GCTCTTCTAGCTTTGGAATTAAAAGCTGATCTTCTAGTTCTGTTGAGTGATGTAGACGGT CTTTACAGTGGTCCTCCCCGTGATCCAGATTCAAAGTTGATTTACACATACATTAAGGAA ATACATGAGAGAGTGATTACTTTTGGAGACAAGTCCAGGGTGGGAAGAGGAGGCATGACT GCCAAAGTAAAAGCTGCTATGTATGCTGCTTATGCTGGCATTCCTGTTGTCATAACCAGT GGCTTTGCGACAGATAACATCATCAAAGTGCTGCATGGGGAACGTATAGGCACACTCTTT CATTGTGATGCCAATAAATGGGCCTCAATTGGAGAGACTGATGCTCGTGAGATGGCAGTG GCTGCAAGGGCATGTTCCAGACGTCTTCAGGCACTGTCTTCCCAAGAAAGGAGTAAAATA TTGCAGGATATAGCTGATGCACTGGAAGCAAATGAAAAGGCAATCCTCGCTGAGAATGAA GCTGATGTGGTTGCTGCTCAACAGGCCGGATATGAGAAGTCTTTGATATCTCGTCTGGCT TTAAATCCAGGAAAAATTTCTAGTCTTGCAAACTCAGTTCGTGTGCTGTCTAACATGGAT GAGCCCCTTGGTCACACTTTAAAAAGAACGGAGATTGCTGATGGATTCATCTTGGAGAAA TCATCATCTCCATTAGGCGTTGTATTGATTATTTTTGAGTCACGACCTGATGCACTTGTA CAGATAGCTTCTCTAGCAGTCCGAAGTGGGAACGGCCTCATGTTGAAAGGAGGAAAGGAG GCCAAAAGATCAAACGCCATCTTACACAAGGTGATTACCTCGGCAATTCCTGTAAGTGTA GGTGAAAGACTTATTGGACTAGTGACTTCTAGAGAAGAGATCCCTGAATTACTTAAGCTT GACGATGTGATTGATCTTGTTATCCCAAGAGGTAGCAATAAACTTGTTTCTCAAATCAAG GCATCAACAAAAATTCCTGTTCTAGGCCATGCTGATGGAATTTGCCATGTTTATGTTGAC AAGTCTGCTGACATGGATATGGCTAAGCGCATTACTGTTGATGCAAAAATCGATTATCCT GCAGCCTGCAATGCGATGGAAACACTTCTTGTGCATAAGGATTTGGCACAAAATGGAGGT CTTAATGATCTGATTGTGGAACTTCAAACAAAAGGGGTTTCTTTATATGGTGGACCCAAA GCTAGCTCCCTGCTCATGATTCCAGAGGCACGTACATTTCGTCACGAATATAGTTCACTA GCTTGCACTGTGGAAGTTGTTGAAGATGTATATGCTGCGATAGATCATATACATCAGCAT GGAAGGCATGTTATTGCCCACACCGATAGCATCATTACTGAAGATCAGGAAGTTGCTGAA GTTTTTTTACGTCAGGTTGACAGTGCTGCTGTATTTCACAACGCAAGTACAAGATTTAGT GATGGATTCCGCTTTGGACTTGGTGCAGAGGTGGGCATTAGTACTGGTCGTATTCATGCT CGTGGCCCAGTTGGAGTTGAAGGATTGCTAACAACTAAATGGCTTGCAAGGGGAAGTGGA CAAATTGTTGATGGTGATAAATCAATTGTGTATAGTCACAAAGACCTTACTCAGCAAGGG TGA

Peptide Sequence

PEP ID	Solyc08g043170.3.1
PEP Infomation	delta 1-pyrroline-5-carboxylate synthetase
Sequence	METVDSTRAFVKNVKRLIVKVGTAVVTRADGRLALGRLGALCEQLQELNSQGYEVILVTS GAVGVGRQRLRYRKLLNSSFLDLQKPQTELDGKACAAVGQNGLMALYDSLFSQLDVTSAQ LLVTDNDFRDPDFRRQLNDTVNSLLSLKVIPIFNENDAISTRRAPYEDSSGIFWDNDSLA ALLALELKADLLVLLSDVDGLYSGPPRDPDSKLIYTYIKEIHERVITFGDKSRVGRGGMT AKVKAAMYAAYAGIPVVITSGFATDNIIKVLHGERIGTLFHCDANKWASIGETDAREMAV AARACSRRLQALSSQERSKILQDIADALEANEKAILAENEADVVAAQQAGYEKSLISRLA LNPGKISSLANSVRVLSNMDEPLGHTLKRTEIADGFILEKSSSPLGVVLIIFESRPDALV QIASLAVRSGNGLMLKGGKEAKRSNAILHKVITSAIPVSVGERLIGLVTSREEIPELLKL DDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRITVDAKIDYP AACNAMETLLVHKDLAQNGGLNDLIVELQTKGVSLYGGPKASSLLMIPEARTFRHEYSSL ACTVEVVEDVYAAIDHIHQHGRHVIAHTDSIITEDQEVAEVFLRQVDSAAVFHNASTRFS DGFRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLARGSGQIVDGDKSIVYSHKDLTQQG *

Transcript Sequence

Transcript ID	Solyc08g043170.3.1
Transcript Infomation	delta 1-pyrroline-5-carboxylate synthetase
Sequence	ATCCCAAACTCATATTAGACTAGAAAAGTGGGTGAAGGAAGTTGACTGCACATTTCTGCT CCTACATTTCTCTTCTTCCCTAGAAATGGAGACAGTTGATTCAACTCGAGCATTTGTGAA GAACGTCAAACGACTCATTGTCAAGGTTGGGACTGCAGTTGTGACTCGAGCTGATGGAAG ATTAGCACTTGGAAGATTAGGAGCCCTCTGTGAGCAGCTTCAGGAGCTTAATTCGCAAGG GTATGAAGTTATTTTGGTGACTTCTGGTGCTGTAGGTGTTGGTCGTCAGCGGCTTAGATA TAGGAAGTTGCTCAACAGCAGTTTTCTTGATCTTCAAAAGCCACAAACTGAGCTTGATGG CAAGGCTTGTGCTGCTGTGGGCCAGAATGGCCTCATGGCTCTGTATGATTCTTTGTTCAG TCAGTTGGATGTGACATCAGCTCAGCTTCTGGTGACTGATAATGACTTTAGAGATCCAGA TTTTAGGAGACAACTCAATGACACAGTAAATTCGTTGCTTTCTCTAAAAGTTATACCTAT ATTCAATGAGAATGATGCTATCAGTACGCGGAGAGCTCCTTATGAGGACTCTTCTGGAAT ATTTTGGGATAATGACAGTCTGGCAGCTCTTCTAGCTTTGGAATTAAAAGCTGATCTTCT AGTTCTGTTGAGTGATGTAGACGGTCTTTACAGTGGTCCTCCCCGTGATCCAGATTCAAA GTTGATTTACACATACATTAAGGAAATACATGAGAGAGTGATTACTTTTGGAGACAAGTC CAGGGTGGGAAGAGGAGGCATGACTGCCAAAGTAAAAGCTGCTATGTATGCTGCTTATGC TGGCATTCCTGTTGTCATAACCAGTGGCTTTGCGACAGATAACATCATCAAAGTGCTGCA TGGGGAACGTATAGGCACACTCTTTCATTGTGATGCCAATAAATGGGCCTCAATTGGAGA GACTGATGCTCGTGAGATGGCAGTGGCTGCAAGGGCATGTTCCAGACGTCTTCAGGCACT GTCTTCCCAAGAAAGGAGTAAAATATTGCAGGATATAGCTGATGCACTGGAAGCAAATGA AAAGGCAATCCTCGCTGAGAATGAAGCTGATGTGGTTGCTGCTCAACAGGCCGGATATGA GAAGTCTTTGATATCTCGTCTGGCTTTAAATCCAGGAAAAATTTCTAGTCTTGCAAACTC AGTTCGTGTGCTGTCTAACATGGATGAGCCCCTTGGTCACACTTTAAAAAGAACGGAGAT TGCTGATGGATTCATCTTGGAGAAATCATCATCTCCATTAGGCGTTGTATTGATTATTTT TGAGTCACGACCTGATGCACTTGTACAGATAGCTTCTCTAGCAGTCCGAAGTGGGAACGG CCTCATGTTGAAAGGAGGAAAGGAGGCCAAAAGATCAAACGCCATCTTACACAAGGTGAT TACCTCGGCAATTCCTGTAAGTGTAGGTGAAAGACTTATTGGACTAGTGACTTCTAGAGA AGAGATCCCTGAATTACTTAAGCTTGACGATGTGATTGATCTTGTTATCCCAAGAGGTAG CAATAAACTTGTTTCTCAAATCAAGGCATCAACAAAAATTCCTGTTCTAGGCCATGCTGA TGGAATTTGCCATGTTTATGTTGACAAGTCTGCTGACATGGATATGGCTAAGCGCATTAC TGTTGATGCAAAAATCGATTATCCTGCAGCCTGCAATGCGATGGAAACACTTCTTGTGCA TAAGGATTTGGCACAAAATGGAGGTCTTAATGATCTGATTGTGGAACTTCAAACAAAAGG GGTTTCTTTATATGGTGGACCCAAAGCTAGCTCCCTGCTCATGATTCCAGAGGCACGTAC ATTTCGTCACGAATATAGTTCACTAGCTTGCACTGTGGAAGTTGTTGAAGATGTATATGC TGCGATAGATCATATACATCAGCATGGAAGGCATGTTATTGCCCACACCGATAGCATCAT TACTGAAGATCAGGAAGTTGCTGAAGTTTTTTTACGTCAGGTTGACAGTGCTGCTGTATT TCACAACGCAAGTACAAGATTTAGTGATGGATTCCGCTTTGGACTTGGTGCAGAGGTGGG CATTAGTACTGGTCGTATTCATGCTCGTGGCCCAGTTGGAGTTGAAGGATTGCTAACAAC TAAATGGCTTGCAAGGGGAAGTGGACAAATTGTTGATGGTGATAAATCAATTGTGTATAG TCACAAAGACCTTACTCAGCAAGGGTGATTATCCAGTTGTGTATTTAGGAAGATTTTGTA TGGTGCTATTGGTAGGTGGGTTTGGGGCTTACCCAAAGATTTTCTGTATTTTCCAGCCAT TGACTTGTGATCATTTGCAGTCTTCACATTATTCTGTATTAACATAGTTATGTTGTTGCA TAGGTTTTAACTTGCAGGACTAACTTGTCCCAATTATAATAATATCGAAATATGTATTCC AAATAATTAAAAAAACGTTTCATATACATAAATGTCCTGCCCAGCTTGCAA