Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g042050.3.1
CDS Infomation	RNA helicase DEAD25
Sequence	ATGGCCTCTTCTTCTTCCATTATAGGAGTTTCCTCCATATACCAAACCAATCCTTCACTC GAACTTTCTCGAAGACCCACTGCTACTCCTCCTCTATCTCTTCCTTTCTCCATTGAAAAA TCCAATTTTCATGTTCATGTTCGTCTCAGACGTCCTTTTCTGGCTTCTGCTGTAGTAACT CCTACTTCTTCGGTGCTAAGTGAAGAAGCCTTTAAAGGAATTGGGGGTTTTGGGAAGGAT TCTTTGAATGTTAGTGAAAGTGAATATGATTCTGAGGATGAGGTTGAGGATAATGAGTCA AATGAGGATGAACTTTCTGTTTCTAAACTTGGTTTACCTCACAGGCTTGTTGACGCTCTT GAGAAGCGTGGAATTACTCAACTTTTCCCAATTCAGAGAGCTGTTCTAGTGCCTGCACTG GAGGGTCGGGATATAATTGCTCGTGCAAAGACAGGGACGGGGAAGACACTCGCCTTTGGT ATTCCAGTATTGAAAAAGCTTAGTACAGATGAAGAAATGAGAAATACTCAGAGACGGGGA CGGCTTCCCAAAGTTTTGGTACTTGCACCTACTCGAGAGTTAGCCAATCAAGTTGAGAAG GAAATGAAAGAGTCGGCACCGTACTTGAACACAGTCTGCATATACGGAGGCGTTTCTTAT GCTACGCAGCAAAATGCACTTTCCCGTGGGGTTGATGTTGTTGTTGGAACTCCAGGTAGA CTTATTGACCTGATAAACAATAACACCTTGAAACTTGGGGAGGTGGAATATTTGGTCCTC GACGAGGCTGATCAAATGCTCGCAGTTGGATTTGAGGAAGATGTGGAAGTTATTTTGGAA AAACTTCCACCACAGAGGCAAAGCATGCTTTTCTCAGCCACCATGCCTGGCTGGGTAAAG AAACTGTCTAGGAAGTACTTGAACAATCCTTTGACAATTGACTTGGTTGGTGATCAAGAT GAAAAGCTGGCAGAGGGGATCAAGCTTTATGCTCTATCAGCTACATCAACATCAAAACGA TCTATACTTGGTGATCTTGTTACAGTTTATGCAAAGGGTGGAAAGACAATTGTTTTTACA CAGACAAAACGAGATGCTGATGAGGTTTCAATGGCATTATCAAATAGCATTTCTTCTGAG GCATTGCATGGTGACATTTCTCAACATCAGAGGGAAAGAACACTAAATGGATTTAGGCAA GGAAAATTCACTGTGCTTGTTGCGACTGACGTTGCATCTCGTGGTCTTGATATACCTAAT GTTGACTTAGTAATCCATTATGAATTACCCAACGATCCAGAAACTTTTGTTCATCGCTCT GGTCGAACTGGCCGTGCTGGAAAAGAAGGCATTGCTATTCTGATGTACACAGGTAGTCAA AGGCGAACTGTCAGATCTCTCGAACGTGATGTTGGGTGCAAGTTTGAATTCGTTAGTCCT CCATCTGTCAAAGAGGTTTTAGAGTCATCAGCTGAACATGTGGTGGCTGCACTTAATGGA GTTCATCCCGAATCTGTTGAGTACTTCATTCCAACTGCGCAACAGTTGATGGAGCAACAA GGAGTGAATTCCCTTGCTGCTGCACTTGCTCTTTTGGGTGGATTTTCCAAACCGCCATCT TCTCGATCTCTAATAACTCATGAACAGGGGTGGACTACATTACAGCTGACACGTGATTCT GAAACTTCCCGAGGATTCCTGTCGGCAAGATCTGTTACTGGTTTCCTCTCTGATGTCTAT TCACCAGCTGCTGATGAAGTTGGCAAAATTCACCTAATTGCAGATGAAAGGGTTCAGGGG GCCATCTTTGATCTTCCTGAGGAGACTGCTGCAGATCTACTAAATCAGGAATTACCTCCT GGAAATACTATTTCCAAGATTACCAAGTTACCTGCTTTACAAGACGATGGGCCAGCTGGT GATTTCTATGGGAGGTTTTCAAGCAGGGATACTAGGGGGACACGAGGAGGTTTAAGAGAC CGTAGAGGCAGATATTCCCAGGGTTCTTCTAGTGGCCGTTACTCTGATAATGATGATGAT AATTGGGGGAATGACTCTAGGTCGCGAGGTGGCCGGACAAGAAGGGGAGGAAGTGATTGG CTGATCAGTGGTGATAGGGATAAGCGCTCTAGCAGGTCTTTTTCTGGAGGAAGCAGAGAC AGAAGCTTTGGTGGTGCATGTTTCAATTGTGGGCGCAGTGGTCACCGAGCATCTGAATGC CCTAACAAAAGAGACTACTAG

Peptide Sequence

PEP ID	Solyc08g042050.3.1
PEP Infomation	RNA helicase DEAD25
Sequence	MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFHVHVRLRRPFLASAVVT PTSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNESNEDELSVSKLGLPHRLVDAL EKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRG RLPKVLVLAPTRELANQVEKEMKESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGR LIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVK KLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFT QTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN VDLVIHYELPNDPETFVHRSGRTGRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSP PSVKEVLESSAEHVVAALNGVHPESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPS SRSLITHEQGWTTLQLTRDSETSRGFLSARSVTGFLSDVYSPAADEVGKIHLIADERVQG AIFDLPEETAADLLNQELPPGNTISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGLRD RRGRYSQGSSSGRYSDNDDDNWGNDSRSRGGRTRRGGSDWLISGDRDKRSSRSFSGGSRD RSFGGACFNCGRSGHRASECPNKRDY*

Transcript Sequence

Transcript ID	Solyc08g042050.3.1
Transcript Infomation	RNA helicase DEAD25
Sequence	AATTTTATGCTTACTCATTAGGAGTGTTTTAAAGGAGTGGTAATTCTGGTATTTTGTTGT GACTGAACCCATAAAAGACCCTGGGCAGTAGGCATTCGTTCCTATACTATAAACCTTCCC ACCCTTATCATCACTTCTATCTATCTCCTTATCCCTTCTCTCCCATGGCCTCTTCTTCTT CCATTATAGGAGTTTCCTCCATATACCAAACCAATCCTTCACTCGAACTTTCTCGAAGAC CCACTGCTACTCCTCCTCTATCTCTTCCTTTCTCCATTGAAAAATCCAATTTTCATGTTC ATGTTCGTCTCAGACGTCCTTTTCTGGCTTCTGCTGTAGTAACTCCTACTTCTTCGGTGC TAAGTGAAGAAGCCTTTAAAGGAATTGGGGGTTTTGGGAAGGATTCTTTGAATGTTAGTG AAAGTGAATATGATTCTGAGGATGAGGTTGAGGATAATGAGTCAAATGAGGATGAACTTT CTGTTTCTAAACTTGGTTTACCTCACAGGCTTGTTGACGCTCTTGAGAAGCGTGGAATTA CTCAACTTTTCCCAATTCAGAGAGCTGTTCTAGTGCCTGCACTGGAGGGTCGGGATATAA TTGCTCGTGCAAAGACAGGGACGGGGAAGACACTCGCCTTTGGTATTCCAGTATTGAAAA AGCTTAGTACAGATGAAGAAATGAGAAATACTCAGAGACGGGGACGGCTTCCCAAAGTTT TGGTACTTGCACCTACTCGAGAGTTAGCCAATCAAGTTGAGAAGGAAATGAAAGAGTCGG CACCGTACTTGAACACAGTCTGCATATACGGAGGCGTTTCTTATGCTACGCAGCAAAATG CACTTTCCCGTGGGGTTGATGTTGTTGTTGGAACTCCAGGTAGACTTATTGACCTGATAA ACAATAACACCTTGAAACTTGGGGAGGTGGAATATTTGGTCCTCGACGAGGCTGATCAAA TGCTCGCAGTTGGATTTGAGGAAGATGTGGAAGTTATTTTGGAAAAACTTCCACCACAGA GGCAAAGCATGCTTTTCTCAGCCACCATGCCTGGCTGGGTAAAGAAACTGTCTAGGAAGT ACTTGAACAATCCTTTGACAATTGACTTGGTTGGTGATCAAGATGAAAAGCTGGCAGAGG GGATCAAGCTTTATGCTCTATCAGCTACATCAACATCAAAACGATCTATACTTGGTGATC TTGTTACAGTTTATGCAAAGGGTGGAAAGACAATTGTTTTTACACAGACAAAACGAGATG CTGATGAGGTTTCAATGGCATTATCAAATAGCATTTCTTCTGAGGCATTGCATGGTGACA TTTCTCAACATCAGAGGGAAAGAACACTAAATGGATTTAGGCAAGGAAAATTCACTGTGC TTGTTGCGACTGACGTTGCATCTCGTGGTCTTGATATACCTAATGTTGACTTAGTAATCC ATTATGAATTACCCAACGATCCAGAAACTTTTGTTCATCGCTCTGGTCGAACTGGCCGTG CTGGAAAAGAAGGCATTGCTATTCTGATGTACACAGGTAGTCAAAGGCGAACTGTCAGAT CTCTCGAACGTGATGTTGGGTGCAAGTTTGAATTCGTTAGTCCTCCATCTGTCAAAGAGG TTTTAGAGTCATCAGCTGAACATGTGGTGGCTGCACTTAATGGAGTTCATCCCGAATCTG TTGAGTACTTCATTCCAACTGCGCAACAGTTGATGGAGCAACAAGGAGTGAATTCCCTTG CTGCTGCACTTGCTCTTTTGGGTGGATTTTCCAAACCGCCATCTTCTCGATCTCTAATAA CTCATGAACAGGGGTGGACTACATTACAGCTGACACGTGATTCTGAAACTTCCCGAGGAT TCCTGTCGGCAAGATCTGTTACTGGTTTCCTCTCTGATGTCTATTCACCAGCTGCTGATG AAGTTGGCAAAATTCACCTAATTGCAGATGAAAGGGTTCAGGGGGCCATCTTTGATCTTC CTGAGGAGACTGCTGCAGATCTACTAAATCAGGAATTACCTCCTGGAAATACTATTTCCA AGATTACCAAGTTACCTGCTTTACAAGACGATGGGCCAGCTGGTGATTTCTATGGGAGGT TTTCAAGCAGGGATACTAGGGGGACACGAGGAGGTTTAAGAGACCGTAGAGGCAGATATT CCCAGGGTTCTTCTAGTGGCCGTTACTCTGATAATGATGATGATAATTGGGGGAATGACT CTAGGTCGCGAGGTGGCCGGACAAGAAGGGGAGGAAGTGATTGGCTGATCAGTGGTGATA GGGATAAGCGCTCTAGCAGGTCTTTTTCTGGAGGAAGCAGAGACAGAAGCTTTGGTGGTG CATGTTTCAATTGTGGGCGCAGTGGTCACCGAGCATCTGAATGCCCTAACAAAAGAGACT ACTAGGTCCTGTAGGTTGTCTCATCATCCTTGGTGCAGTTTTTGTATGTGGGTGACAATT TCTGATATACCTCTCACTATTTCCTGTGAAAGCCAGCAATGAAGATAAAGGAGTTTTGAG TATATGTGATACATATGAGCAACAGCAAGATCCTTTACTGTTCCCTCCAGAAAGCACCAT CCCTAAAGCTTCACATGGCCCTACCGATGATTAATTGATTTTCTGTTTCTGAAGCATGCA ATCAGTTGCCAGTTATTTTCTCTTAGTTTGTTGATGTTGTAGGTGAAGTAGGGTAAGATA TATCAACTTTCAGTATAAATATGTCGGACTGCAGAGTCTTCCAATTTATCTCATCTTTGA GATGAGAAACAGATGCAGCGTTTGGGTTCAGGCATGTCAAATATACTCTGTTATTGTAAG CAAGGTTCATTTTAGGAGTAATACTTGTGGTACCACTATATTCTGCATCCTCATTTTCCC AAGCTTGTTGCATTTGGCTTTATCTACCTAACAATATGGAAGTGACAATACTAAAA