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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g041700.1.1
CDS Infomation

LOW QUALITY:F-box protein (AHRD V3.3 *** A0A072VIK4_MEDTR)
Sequence

ATGCCTACAAAGGCCATCAGTTTTTGCTTACTTCCATCAGAACTCATCCAATATATAATC
CTTCAACTTTCATTGCCAGAGATTATCCAACTCAAATCTGTTAATAAGTCTATTTTGTCT
ATCATTTCTGATGGAGATTTCATTCGTAACTACAATCATCAATCAAGCTCCGCCACATGG
CTCTTCCTTTATAAAAAACGTTGGCGTCGTGAAGCCCTTCTCTATGGTATTTCTGATTGT
TCCAATCGTTGGTTCACTATATTGATATGTGATATGTTGAAACAAGTAGTACCACCAGGT
GAAGATGTCTACTTTTTGACTGCTAATGCTAATATATTCCTCTTCGCTTTGAATAATACA
CAACAACTCATGTCACTTGATATTATGACTAGGGTTGTCAAAAACATCCCTCCAAGTCCT
TTAGGTCCACGGGGTACATCCTTGTGGCGAAGATCCGGTATGAAATTATTGTCTTGCCCT
AATTGCAACTGTAACCATTTTAGATTCTTGTTTGCTGAATATCATCAAAATCGTCCAACT
TTATTTGAGTATGATTCAAGAGTTGAAACATGGGAATATTGTTGGGGAACAGATGAGGTT
GTTAGCCAAGACTACTATTTCGATGATGAATATATATTCTTAAGTGCATCTAATGGACGA
AATGGAAGTGTTATCATAGGCGTTGTGCGACCTCATGAATGCTGCAACACTACTACTATC
ACTACTAATACTCCGCTTGTCATCAGACCAACATTCAATAATGAGCAGGAGCACCAACAT
CATCGATTAGCCGTTGGATTTAGTTGGGGGAATTCCATAGATCTATTACACGTCTATGGT
GATGGCAATATGATGACTATTAGATCAGACAAAGTCAATAATAACAGTAATAAAAGAAAG
ATAAAGAGAATAGAGTTATGGGGTTTGAGCAGAAATAATGGGAGGTATTGGGAATTTGTA
TCAGTAGCACCAAATGAGTTGATTCATAAAATAAGCAAACCATATGGTGCTATGATGGGG
TGTATGCAAAAATCAAAAGGAGTAACAAGGGCAATTTTGATGACAAATCTTGAAGGTACA
TGGGAAACTATTTGGTTAAGCTATAACAACAACAACAATCATTGGGCCTGGCTTCCATTA
CCTGATTGCAACATGAAAGGCTCAAACCTGGCTGGAGTCACATTCTCCTCTGGTTTAACA
TTATCCTAG

Peptide Sequence

PEP ID

Solyc08g041700.1.1
PEP Infomation

LOW QUALITY:F-box protein (AHRD V3.3 *** A0A072VIK4_MEDTR)
Sequence

MPTKAISFCLLPSELIQYIILQLSLPEIIQLKSVNKSILSIISDGDFIRNYNHQSSSATW
LFLYKKRWRREALLYGISDCSNRWFTILICDMLKQVVPPGEDVYFLTANANIFLFALNNT
QQLMSLDIMTRVVKNIPPSPLGPRGTSLWRRSGMKLLSCPNCNCNHFRFLFAEYHQNRPT
LFEYDSRVETWEYCWGTDEVVSQDYYFDDEYIFLSASNGRNGSVIIGVVRPHECCNTTTI
TTNTPLVIRPTFNNEQEHQHHRLAVGFSWGNSIDLLHVYGDGNMMTIRSDKVNNNSNKRK
IKRIELWGLSRNNGRYWEFVSVAPNELIHKISKPYGAMMGCMQKSKGVTRAILMTNLEGT
WETIWLSYNNNNNHWAWLPLPDCNMKGSNLAGVTFSSGLTLS*

Transcript Sequence

Transcript ID

Solyc08g041700.1.1
Transcript Infomation

LOW QUALITY:F-box protein (AHRD V3.3 *** A0A072VIK4_MEDTR)
Sequence

ATGCCTACAAAGGCCATCAGTTTTTGCTTACTTCCATCAGAACTCATCCAATATATAATC
CTTCAACTTTCATTGCCAGAGATTATCCAACTCAAATCTGTTAATAAGTCTATTTTGTCT
ATCATTTCTGATGGAGATTTCATTCGTAACTACAATCATCAATCAAGCTCCGCCACATGG
CTCTTCCTTTATAAAAAACGTTGGCGTCGTGAAGCCCTTCTCTATGGTATTTCTGATTGT
TCCAATCGTTGGTTCACTATATTGATATGTGATATGTTGAAACAAGTAGTACCACCAGGT
GAAGATGTCTACTTTTTGACTGCTAATGCTAATATATTCCTCTTCGCTTTGAATAATACA
CAACAACTCATGTCACTTGATATTATGACTAGGGTTGTCAAAAACATCCCTCCAAGTCCT
TTAGGTCCACGGGGTACATCCTTGTGGCGAAGATCCGGTATGAAATTATTGTCTTGCCCT
AATTGCAACTGTAACCATTTTAGATTCTTGTTTGCTGAATATCATCAAAATCGTCCAACT
TTATTTGAGTATGATTCAAGAGTTGAAACATGGGAATATTGTTGGGGAACAGATGAGGTT
GTTAGCCAAGACTACTATTTCGATGATGAATATATATTCTTAAGTGCATCTAATGGACGA
AATGGAAGTGTTATCATAGGCGTTGTGCGACCTCATGAATGCTGCAACACTACTACTATC
ACTACTAATACTCCGCTTGTCATCAGACCAACATTCAATAATGAGCAGGAGCACCAACAT
CATCGATTAGCCGTTGGATTTAGTTGGGGGAATTCCATAGATCTATTACACGTCTATGGT
GATGGCAATATGATGACTATTAGATCAGACAAAGTCAATAATAACAGTAATAAAAGAAAG
ATAAAGAGAATAGAGTTATGGGGTTTGAGCAGAAATAATGGGAGGTATTGGGAATTTGTA
TCAGTAGCACCAAATGAGTTGATTCATAAAATAAGCAAACCATATGGTGCTATGATGGGG
TGTATGCAAAAATCAAAAGGAGTAACAAGGGCAATTTTGATGACAAATCTTGAAGGTACA
TGGGAAACTATTTGGTTAAGCTATAACAACAACAACAATCATTGGGCCTGGCTTCCATTA
CCTGATTGCAACATGAAAGGCTCAAACCTGGCTGGAGTCACATTCTCCTCTGGTTTAACA
TTATCCTAG