Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g029090.3.1
CDS Infomation	B3 domain-containing protein family (AHRD V3.3 - A0A151RF19_CAJCA)
Sequence	ATGCCTCCTCAGTTCTTCAAGATTATCTTATCTCCTCATGCCTCCAAATTAAATATCCCC GATGAATTTGTAATCAAGTATGGAGCCGATCTGCGTGATGTTGTGTTCCTTGAGGTCCCT ACTGGAGCCATCTGGAAAGTTGAATTATTGCAAAACTCAAATGGAACCAAATACCTCAAC AATGGATGGAACCAATTTAAGGAATATTATTCCATTGCTATTGGTTACTTTTTACTCTTT CAATATAATGGAAACTCTCATTTCTCTGTTTGCATATTTGATTTAAGTGCTTCTGAGATT GAATATCTTTCTGGACCAAATGAACATGAACCTCCAGTATCCCGCCCTAATTGTCTAGCA GAAAGGCACAGAGAGAAACCAGATGTGGGGGAGGATTTGACCTATGCAACACAAAAACGT AAAAAGAGTAAAAGAAATGGGCACTCCAATGAAGTAGTGGATCCGTCAACATCGAAGGTG ACAACCACGAATCAGCACAGAACTGTAGATTGTCGATATCCACTACGAAGTAAGCAACGG AAAGATGTAAAGATTGAAAAAGGAGATGTGGAAGAAGGGCATTGCAATGAAGCACTGGAT CCCTCAACATCGAAGGTGCACTCTAAAAAGAGAACTGCTGCCAGTTTGGATGCATCAAAT TGTCGGTATCCACTACGAAGTAAGCAACTGAAAGAGGTGAAGGTTGTAAAAGGAGATGTG GAAGGTATTTGGTTCAGTGACTTGTTCTTTGTGTTGAACTATGTCATGATGGATGACATT TTTCTTCTTCCTCCCGTTTCCCGCTTCATCTTTTATGCAGACCACTGTAACAAAATACAC TTAGTGGCGGATCCCTCAGCAACTAAGATGACAACCACTGTCCGACATCATGAAAAGAAA ACTAGTGCCAGTTTTGATACGTCACATTGTAGGTATCCACTGCGAAACAAGCAACTGAAA GAGGTGAAGCCTGGAAAAACAAACGCAGAAAAGGATTTGCTTTATGTAGCACAAAAAGCA AAAAGAAAGAAGGCTAATAATGTGAAGCTTGAGAAAGGAGATGCGGAAGAGCGCAGCAAA GTAGGGGATCCCTCAGCATCTACTACCACTAATCAACATAATGAAAAGAAAACTACTACC AGTTTGGACGCATCACATTGCAGGTGTCCACTACGAAGTAAGCAACACAAAGAGGTGAAG CTTGAACAGTGGGAAGCAGGAGGGAACATGCATAACAAAACACCGGTAGCAGATTCTCCA TATTGTAGAAGTCAAAACCCCAGCCTTCCAGCATCCTCTCCAAGTTGTCAGCCAGTCCGG GTGAAGCTTGAAAAACCAGATAATCTGTTTTGTGCAGCAGAAAAAGTAAAAGGGAGGGAG ACCAACAATGTGAAGCTTGACACAGGAGACTTGGAAGGGAATTTGGTTGCTGCATCTTAT AAAGGAAAATATTCCACAGCCTCTGAGATGACAGTACTTGGCAAGAAAAAGATGTTACCC TCGGAGACGCAGAATCGGGATATGTACTTCAATCCACACTTCACTGTTTCTATGCTGCCT GCTTATGTCTCCAGAAACTTCCAATTGGAAATACCTGCTGACTTTTTCAAGAAACGTGTG AATGAAGAGGAAACCATTGTAAATCTACGAGTTTCTAATGGGAGAAGTTGGCGTGCAAAG TTGTTTGATATTCAATCAAATTGTCCAAAGATGGAATCATCAGGTTGGAGGGACTTTGTG ATCGACAACAATTTAAAAGAGCATGATACTTGTGTCTTTGAGCTGAATGACGGCATTGAG CCAATGCTACTGGATGTGACAATTTTCCGAGCCACAACTCCCGTTTCCTGA

Peptide Sequence

PEP ID	Solyc08g029090.3.1
PEP Infomation	B3 domain-containing protein family (AHRD V3.3 - A0A151RF19_CAJCA)
Sequence	MPPQFFKIILSPHASKLNIPDEFVIKYGADLRDVVFLEVPTGAIWKVELLQNSNGTKYLN NGWNQFKEYYSIAIGYFLLFQYNGNSHFSVCIFDLSASEIEYLSGPNEHEPPVSRPNCLA ERHREKPDVGEDLTYATQKRKKSKRNGHSNEVVDPSTSKVTTTNQHRTVDCRYPLRSKQR KDVKIEKGDVEEGHCNEALDPSTSKVHSKKRTAASLDASNCRYPLRSKQLKEVKVVKGDV EGIWFSDLFFVLNYVMMDDIFLLPPVSRFIFYADHCNKIHLVADPSATKMTTTVRHHEKK TSASFDTSHCRYPLRNKQLKEVKPGKTNAEKDLLYVAQKAKRKKANNVKLEKGDAEERSK VGDPSASTTTNQHNEKKTTTSLDASHCRCPLRSKQHKEVKLEQWEAGGNMHNKTPVADSP YCRSQNPSLPASSPSCQPVRVKLEKPDNLFCAAEKVKGRETNNVKLDTGDLEGNLVAASY KGKYSTASEMTVLGKKKMLPSETQNRDMYFNPHFTVSMLPAYVSRNFQLEIPADFFKKRV NEEETIVNLRVSNGRSWRAKLFDIQSNCPKMESSGWRDFVIDNNLKEHDTCVFELNDGIE PMLLDVTIFRATTPVS*

Transcript Sequence

Transcript ID	Solyc08g029090.3.1
Transcript Infomation	B3 domain-containing protein family (AHRD V3.3 - A0A151RF19_CAJCA)
Sequence	ATTTAGAAGTACAATTATTTTTATGTCAGTGTAGAAGTGGCTAGGAGAGAGGAAAGCATA AAATAGAATCAAGCAAAAGATTTAGTTGGGACTTGGGATACGAAGAAGAGGAAGTAAGTG TAGTAAAGAAAAACCAAATTAGCTCTTCTTTCTATGAGAGAAGAGAAGAAATAGTTTCAT TTGTAAAAGCAAAAAACAAAGTGAAGAAGAAGAAAACGGAAATGCCTCCTCAGTTCTTCA AGATTATCTTATCTCCTCATGCCTCCAAATTAAATATCCCCGATGAATTTGTAATCAAGT ATGGAGCCGATCTGCGTGATGTTGTGTTCCTTGAGGTCCCTACTGGAGCCATCTGGAAAG TTGAATTATTGCAAAACTCAAATGGAACCAAATACCTCAACAATGGATGGAACCAATTTA AGGAATATTATTCCATTGCTATTGGTTACTTTTTACTCTTTCAATATAATGGAAACTCTC ATTTCTCTGTTTGCATATTTGATTTAAGTGCTTCTGAGATTGAATATCTTTCTGGACCAA ATGAACATGAACCTCCAGTATCCCGCCCTAATTGTCTAGCAGAAAGGCACAGAGAGAAAC CAGATGTGGGGGAGGATTTGACCTATGCAACACAAAAACGTAAAAAGAGTAAAAGAAATG GGCACTCCAATGAAGTAGTGGATCCGTCAACATCGAAGGTGACAACCACGAATCAGCACA GAACTGTAGATTGTCGATATCCACTACGAAGTAAGCAACGGAAAGATGTAAAGATTGAAA AAGGAGATGTGGAAGAAGGGCATTGCAATGAAGCACTGGATCCCTCAACATCGAAGGTGC ACTCTAAAAAGAGAACTGCTGCCAGTTTGGATGCATCAAATTGTCGGTATCCACTACGAA GTAAGCAACTGAAAGAGGTGAAGGTTGTAAAAGGAGATGTGGAAGGTATTTGGTTCAGTG ACTTGTTCTTTGTGTTGAACTATGTCATGATGGATGACATTTTTCTTCTTCCTCCCGTTT CCCGCTTCATCTTTTATGCAGACCACTGTAACAAAATACACTTAGTGGCGGATCCCTCAG CAACTAAGATGACAACCACTGTCCGACATCATGAAAAGAAAACTAGTGCCAGTTTTGATA CGTCACATTGTAGGTATCCACTGCGAAACAAGCAACTGAAAGAGGTGAAGCCTGGAAAAA CAAACGCAGAAAAGGATTTGCTTTATGTAGCACAAAAAGCAAAAAGAAAGAAGGCTAATA ATGTGAAGCTTGAGAAAGGAGATGCGGAAGAGCGCAGCAAAGTAGGGGATCCCTCAGCAT CTACTACCACTAATCAACATAATGAAAAGAAAACTACTACCAGTTTGGACGCATCACATT GCAGGTGTCCACTACGAAGTAAGCAACACAAAGAGGTGAAGCTTGAACAGTGGGAAGCAG GAGGGAACATGCATAACAAAACACCGGTAGCAGATTCTCCATATTGTAGAAGTCAAAACC CCAGCCTTCCAGCATCCTCTCCAAGTTGTCAGCCAGTCCGGGTGAAGCTTGAAAAACCAG ATAATCTGTTTTGTGCAGCAGAAAAAGTAAAAGGGAGGGAGACCAACAATGTGAAGCTTG ACACAGGAGACTTGGAAGGGAATTTGGTTGCTGCATCTTATAAAGGAAAATATTCCACAG CCTCTGAGATGACAGTACTTGGCAAGAAAAAGATGTTACCCTCGGAGACGCAGAATCGGG ATATGTACTTCAATCCACACTTCACTGTTTCTATGCTGCCTGCTTATGTCTCCAGAAACT TCCAATTGGAAATACCTGCTGACTTTTTCAAGAAACGTGTGAATGAAGAGGAAACCATTG TAAATCTACGAGTTTCTAATGGGAGAAGTTGGCGTGCAAAGTTGTTTGATATTCAATCAA ATTGTCCAAAGATGGAATCATCAGGTTGGAGGGACTTTGTGATCGACAACAATTTAAAAG AGCATGATACTTGTGTCTTTGAGCTGAATGACGGCATTGAGCCAATGCTACTGGATGTGA CAATTTTCCGAGCCACAACTCCCGTTTCCTGAAAGATAGTCAAGTCACCCATTTTGCAAG CACTTAAGCTTTCTATCCATCTTGTGTATTTTGGTGCCCTCTCCTTATATTTGCTACTAT TTCCTAAACGTTGTACTAACAACTGTTTAAAACTTTCCTTTTCACCTCCAGCATATATGT TTACTTGTTATTTTTTGGTTTCATGCTGCTTTGTACTAATTTAGAGAGCAAGTTGAAATA TTAGTAGAAATTAGGGTTGTCCAAACATTGAATCCCTACATTGTTGACTTGTGTGGATGT AATTTGCTCAAAACAAGGGATATTAAAGGTGACTTGGAATGTCTTTGTTAACCCATATAA AAATATACAAGATTTCATTAATATTTTAACCATTAGGCCTCAT