Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g023470.3.1
CDS Infomation

geranyl pyrophosphate synthase
Sequence

ATGATATTTTCAAAGGGTTTAGCTCAGATTTCCAGAAACCGCTTCAGCAGATGCCGATGG
TTATTTTCATTACGTCCCATCCCACAATTACATCAATCCAATCACATCCACGATCCTCCA
AAGGTTCTGGGTTGCAGAGTAATTCATTCATGGGTTTCTAATGCTCTTAGTGGTATTGGG
CAACAAATTCATCAGCAAAGCACTGCTGTAGCAGAGGAGCAAGTGGACCCATTTTCCCTT
GTTGCAGATGAATTATCCCTTCTGACAAACAGGCTGAGATCAATGGTAGTCGCGGAGGTC
CCAAAGCTGGCTTCAGCTGCTGAATATTTCTTCAAACTGGGAGTAGAAGGAAAGAGGTTT
CGACCAACAGTTTTGCTATTGATGGCAACTGCATTGAACGTACAGATTCCTAGATCTGCT
CCGCAGGTGGATGTTGATTCTTTTTCCGGGGATTTGCGTACAAGGCAGCAGTGTATAGCT
GAGATCACTGAGATGATCCATGTTGCTAGCCTACTTCATGATGATGTACTGGATGATGCT
GACACAAGACGTGGGATAGGTTCTTTAAACTTTGTGATGGGAAATAAGCTAGCTGTACTA
GCCGGAGACTTTTTGCTTTCCCGAGCATGTGTGGCACTTGCCTCCTTGAAGAACACAGAG
GTTGTATGTCTTCTGGCAACTGTTGTGGAACATCTTGTTACTGGAGAGACAATGCAAATG
ACGACTTCTTCTGATGAACGTTGTAGCATGGAGTATTATATGCAGAAAACATATTACAAG
ACTGCATCATTGATTTCAAATAGTTGCAAAGCAATTGCACTACTTGCTGGGCATAGTGCT
GAAGTCTCCGTGCTGGCTTTTGACTACGGAAAAAATCTGGGATTGGCATTTCAATTAATA
GATGATGTTCTTGATTTCACGGGCACATCTGCAACTCTTGGCAAGGGTTCATTGTCTGAT
ATTCGTCATGGGATTGTAACTGCCCCGATATTGTATGCCATGGAGGAATTTCCTCAACTG
CGTACGCTGGTGGACCGAGGTTTTGATGATCCTGTCAATGTGGAGATCGCTCTGGACTAC
CTTGGGAAGAGCAGAGGGATACAGAGAACAAGAGAACTTGCGAGAAAGCATGCTAGCCTT
GCGTCAGCGGCAATTGACTCTCTTCCAGAAAGCGATGACGAGGAAGTTCAGAGATCAAGA
CGAGCACTTGTAGAACTTACTCACAGAGTCATCACAAGAACAAAATAG

Peptide Sequence

PEP ID

Solyc08g023470.3.1
PEP Infomation

geranyl pyrophosphate synthase
Sequence

MIFSKGLAQISRNRFSRCRWLFSLRPIPQLHQSNHIHDPPKVLGCRVIHSWVSNALSGIG
QQIHQQSTAVAEEQVDPFSLVADELSLLTNRLRSMVVAEVPKLASAAEYFFKLGVEGKRF
RPTVLLLMATALNVQIPRSAPQVDVDSFSGDLRTRQQCIAEITEMIHVASLLHDDVLDDA
DTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVCLLATVVEHLVTGETMQM
TTSSDERCSMEYYMQKTYYKTASLISNSCKAIALLAGHSAEVSVLAFDYGKNLGLAFQLI
DDVLDFTGTSATLGKGSLSDIRHGIVTAPILYAMEEFPQLRTLVDRGFDDPVNVEIALDY
LGKSRGIQRTRELARKHASLASAAIDSLPESDDEEVQRSRRALVELTHRVITRTK*

Transcript Sequence

Transcript ID

Solyc08g023470.3.1
Transcript Infomation

geranyl pyrophosphate synthase
Sequence

AAGCACCAATTTGGACTTGGGAAACCCAAAAAATCTCTTGAATACTTGAGGAGTTACAAT
TTGAAGGACAAATTAGGAATTTGGTAAATGCATAGAATGGTTGCTTTTTGCTCACAACCC
TGGGCCTGTGTACCGCTTTGCTTTACATGACCATTCTCCTCTGTCTTCTTGGCAACTAAA
ACTCAAATTATATACTCAAACTCAGCAGTCAGCGTACACACACACACAAAATAGAAATTG
AATACGAACGATGATATTTTCAAAGGGTTTAGCTCAGATTTCCAGAAACCGCTTCAGCAG
ATGCCGATGGTTATTTTCATTACGTCCCATCCCACAATTACATCAATCCAATCACATCCA
CGATCCTCCAAAGGTTCTGGGTTGCAGAGTAATTCATTCATGGGTTTCTAATGCTCTTAG
TGGTATTGGGCAACAAATTCATCAGCAAAGCACTGCTGTAGCAGAGGAGCAAGTGGACCC
ATTTTCCCTTGTTGCAGATGAATTATCCCTTCTGACAAACAGGCTGAGATCAATGGTAGT
CGCGGAGGTCCCAAAGCTGGCTTCAGCTGCTGAATATTTCTTCAAACTGGGAGTAGAAGG
AAAGAGGTTTCGACCAACAGTTTTGCTATTGATGGCAACTGCATTGAACGTACAGATTCC
TAGATCTGCTCCGCAGGTGGATGTTGATTCTTTTTCCGGGGATTTGCGTACAAGGCAGCA
GTGTATAGCTGAGATCACTGAGATGATCCATGTTGCTAGCCTACTTCATGATGATGTACT
GGATGATGCTGACACAAGACGTGGGATAGGTTCTTTAAACTTTGTGATGGGAAATAAGCT
AGCTGTACTAGCCGGAGACTTTTTGCTTTCCCGAGCATGTGTGGCACTTGCCTCCTTGAA
GAACACAGAGGTTGTATGTCTTCTGGCAACTGTTGTGGAACATCTTGTTACTGGAGAGAC
AATGCAAATGACGACTTCTTCTGATGAACGTTGTAGCATGGAGTATTATATGCAGAAAAC
ATATTACAAGACTGCATCATTGATTTCAAATAGTTGCAAAGCAATTGCACTACTTGCTGG
GCATAGTGCTGAAGTCTCCGTGCTGGCTTTTGACTACGGAAAAAATCTGGGATTGGCATT
TCAATTAATAGATGATGTTCTTGATTTCACGGGCACATCTGCAACTCTTGGCAAGGGTTC
ATTGTCTGATATTCGTCATGGGATTGTAACTGCCCCGATATTGTATGCCATGGAGGAATT
TCCTCAACTGCGTACGCTGGTGGACCGAGGTTTTGATGATCCTGTCAATGTGGAGATCGC
TCTGGACTACCTTGGGAAGAGCAGAGGGATACAGAGAACAAGAGAACTTGCGAGAAAGCA
TGCTAGCCTTGCGTCAGCGGCAATTGACTCTCTTCCAGAAAGCGATGACGAGGAAGTTCA
GAGATCAAGACGAGCACTTGTAGAACTTACTCACAGAGTCATCACAAGAACAAAATAGGG
GGAATAAAGGGAATCTATCAGGTGCAGCCACAGATTCAATTAGTGTATTTTTTTTCCTCA
ACACGAAATCCTGTATTTCTAGGGACAACATACCCTAACTTTACATTATGATTTTGTTAT
AGATAGATAACTTATGATTCTTCTCATCCAATAATAACTTGGTAAGACCTTTGTTTTTGC
TCGCTCTGTACTGGAAAGAATTTGTAGATTAAATGTGAATGATACACTTTGATGTTGTAC
AATCCAGTCGAAACTAAGCGGATACATAAGGTTGAAAAGACTAATGGATATCTACTAGGT
GTGCGAGTTGCGTTCAGTTTTGTATTTATTTGTATTTTGGGAAATGTCAAGCCAGGGGTG
ATGTGCTTTGTCTTTTTTCTTCTTCAGTCTCTGCTAGTATTGTAAGTGGTGATTATTTGC
AGTTTATGTCTGTAACAATATATGTGGATAAACAGATCTACTTTGCAGTAGTGTTG