Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g023280.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 --* AT3G07200.3)
Sequence	ATGGCAGATATTTCGCACCTTGAAAGAATGGGAAGAGAGCTCAAATGCCCCATTTGCTTG AGTCTGTTCAATTCTGCTGTTTCACTTACATGTAATCATGTATTTTGCAATTTATGTATT CAAACTGGTATGAAATCTGGATCCAATTGTCCGGTGTGCAAAGTTCCATTTCATCGCAGA GAAATCCGACCTGCTCTCCACATGGATAACTTGGTGAGCATCTATAAGAACATGGAAATT GCTTCAGGAGTCAATATGTTTCTCACTCAATCCAATCCTTCCACAAAATTACCAGGGGAA AACACTCGATCTAATGGCGAAAAAGTTTGTGGATTCCAAGAGACACCTAAAACTGTAACA GAAGCTCCAGCGACAGACAATCAGAAAAGAAAAAGAGGGAAAGGATCAAAAAGATCTTCA GGGTGCAACAAAAAAATTTCCGGATCAAATCTTATTAGACCTTCTTTTCCAACAAAGAAG AGAGTACAGGTGCCACAATATCCACCTTCAGAGACTCCACCACCTACAAAGTTAGTTGAT GGAAATGGCAAATCCATCACCGATGAAGTTCAGAAACCATTGGTAATTGAGAGAGATAGG TCTATGCTAAATGAAAAAGGAGAACCTGTGCTATCTCCATTCTTCTGGCTGAGAGAAGAG GATGTAGATAAATCAAGTCAGCAAACAGATGGGGACGTTATCATGGATACTCCTCCAGCT TTTCCATCCTTCAGCGATATGAAAGACTTGGATGATGAGGTTCACTGCGAAATGACTCCA AAAAGTGGACCCTATGATGCAGCAAATGGAGCAGATCTTTTTGACAGTGAGATGTTTGAC TGGACACAAAGAGCTTGCTCCCCTGAACTTTGTTCTAGTCCCTTTAAGATGAAGCTTAAG GATACTATTGATTCTGCTGAAGCTCAGGAAAAGACTCAAGCTCACTCAGTTGAGGAAAGT GACATTAATGCATCAGCAACTGAAAACAGAACAGCTGTGGAAAATGAAAAGGGTACTGAT AAAGGACAGCTGAGTTCACCCGCGATATTTTCTCCTGTAAATAAAACCACTAGTAGAAAA GACGTTGTTTGCAAGTCTAGCAGGAGCAAGTCATTGAGAAGTAGCCAGAAGAAACAAGGA AAAAACATAATTGGAGAATTATCAGAAGTTCATGATGCTTCACTAAAAGCAGCTGAAAAC ACTATGAAGAACAATCAGGATAATGCCAATGCATTTATCTCGAATAAGAAGGATTCGAAA AACAAGAAAAAGGGTAGATCCTCTAGAAATGTCACTGAGTCAGTTGTAGAAGACATTTCC ACTTCATGTGGTGCTAAAAGACTTCGCAAGGGCAATAACTCAAAGTCCTTCAACTTGTCT ACTATTGTGAATCAGGAAAAACATAGTGAAGGAAGTGTCGAGACACTTGACTTGAAGACG CATAATATATTCCGCAAGGGATCATTACGTGAACAAGCTAAAAACTGTTTTGGACCAAAA GGCGGAAAGAAAACTGCTGTGTGTAACATTCCACAAATTCAAGATGAAGCTTTGCCTTTC GAATCAGCAAATAGATTGATTCCCATGGATAACAAGAAACCTACTCGTAGTACAAAACTG AAGAAATGTGAGCTTGGTAGTGACAACAAGCTTCATGGGAAGAAAAAAGTGAAGTTTTCT GATGATGGGCAGCTTGCTGACAAGGATAATATTACGCTTCAAAAGATTCAGAAGAGAGTG CTCAATTCATTGGAAACAGATAAATCTGTTTTGAACTCGAATGATTCAGTTTTGCAGAAG TGTGAGGCAAGCCAAAGCAAAATACAATGTGCTTTCTGCCGTTCAGCAGAGATATCTGAG GTTTCAGGAATCATGGTAAGCTACCTTAATGGAAACCCTGTCAAAGAAGATGTCAATGGA GCACCAGGTGTTATACATGTTCACAAATATTGTGCAGAATGGGCCCCTAATGTATATTTT GGAGACGATGATGTGGTCAACCTTGAATCTGAACTGAAGAGGAGTCGAAGGATCACTTGT TTTTTCTGTGGAGTAAAGGGGGCAGCTCTTGGGTGTTATGAGATGAGTTGTCGCAAAAGC TTTCATGTTCCTTGTGCCAAATTGACACCAGAGTGTAGATGGGATTCTGATAACTTTGTT ATGTTATGCCCTTTGCATGCTAACTCTAAGTTGCCATCCGAGATCCCAGGAAAACAGACA AAGATTGGAGATAGCATTAAAAGAAATTCTCGTATCCACCAACCCAATGTCTCAGCAACA CCTGATAATGGTGCTACTTTGCAGTGGAAGTCTCAGAAGAAGAATAAGAACTTAGTGCTC TGTTGTTCAGCTCTAACCGCAGATGAAAAAGAGCTTGTTTCTAAATTAAAGAGGTTGTCT GGCGTGACAGTAGTCAAGAACTGGGACCTAAGTGTCACCCATGTCATTGCTTCTACTGAT GAGAAAGGAGCATGCCGAAGAACTCTCAAGTATTTGATGGGTGTCTTGGCTGGGAAATGG ATAATGAGCATCAACTGGATTATTGCTAGCTTGGAAGCCACAGAATATGTCGATGAACAA CAATACGAGATTAAAATAGATACTCATGGCATTGTGGATGGGCCTAAGCTTGGAAGATTG AGGATTTTAAACAAGCAACCAAAGCTTTTCAATGGATACAAGTTCTTTTTTATGGGCGAC TTTTTATCTTCATACAAGAGCTACCTACATGACCTTGTTATTGCTGCTGGAGGAATTGTC CTTAACAGGAAGCCTATTGCACTGGATCAGGAAATTCTTTCACCCGGATGCCCTCTACTG TTTGTAATTTATAGTCATGAACAACTTGATCAGTGCGAAGGAAGTGAAAAAATTTCAATT ATAGCGCGCAGAAGATCTAATGCAGAAGTTTTGGCTAGTTCAACTGGAGCTGTAGCTGCC AGCCACTCCTGGATTCTAAACTGCATTGCTGGCTCTAGGTTGTTGGAGCTGGAATAG

Peptide Sequence

PEP ID	Solyc08g023280.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 --* AT3G07200.3)
Sequence	MADISHLERMGRELKCPICLSLFNSAVSLTCNHVFCNLCIQTGMKSGSNCPVCKVPFHRR EIRPALHMDNLVSIYKNMEIASGVNMFLTQSNPSTKLPGENTRSNGEKVCGFQETPKTVT EAPATDNQKRKRGKGSKRSSGCNKKISGSNLIRPSFPTKKRVQVPQYPPSETPPPTKLVD GNGKSITDEVQKPLVIERDRSMLNEKGEPVLSPFFWLREEDVDKSSQQTDGDVIMDTPPA FPSFSDMKDLDDEVHCEMTPKSGPYDAANGADLFDSEMFDWTQRACSPELCSSPFKMKLK DTIDSAEAQEKTQAHSVEESDINASATENRTAVENEKGTDKGQLSSPAIFSPVNKTTSRK DVVCKSSRSKSLRSSQKKQGKNIIGELSEVHDASLKAAENTMKNNQDNANAFISNKKDSK NKKKGRSSRNVTESVVEDISTSCGAKRLRKGNNSKSFNLSTIVNQEKHSEGSVETLDLKT HNIFRKGSLREQAKNCFGPKGGKKTAVCNIPQIQDEALPFESANRLIPMDNKKPTRSTKL KKCELGSDNKLHGKKKVKFSDDGQLADKDNITLQKIQKRVLNSLETDKSVLNSNDSVLQK CEASQSKIQCAFCRSAEISEVSGIMVSYLNGNPVKEDVNGAPGVIHVHKYCAEWAPNVYF GDDDVVNLESELKRSRRITCFFCGVKGAALGCYEMSCRKSFHVPCAKLTPECRWDSDNFV MLCPLHANSKLPSEIPGKQTKIGDSIKRNSRIHQPNVSATPDNGATLQWKSQKKNKNLVL CCSALTADEKELVSKLKRLSGVTVVKNWDLSVTHVIASTDEKGACRRTLKYLMGVLAGKW IMSINWIIASLEATEYVDEQQYEIKIDTHGIVDGPKLGRLRILNKQPKLFNGYKFFFMGD FLSSYKSYLHDLVIAAGGIVLNRKPIALDQEILSPGCPLLFVIYSHEQLDQCEGSEKISI IARRRSNAEVLASSTGAVAASHSWILNCIAGSRLLELE*

Transcript Sequence

Transcript ID	Solyc08g023280.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 --* AT3G07200.3)
Sequence	CCCCAAAAGGAATGAGGGCAAAAATTGCAGATGTTGTGGCGGGAGAGAATAAGCGCGCTT TCACTAAAATTTCAAATAATTCCCCCTCAAAAATATAGAACACCTTCGCTGTTAACATTT ACTGTTATTCACATCTCACTCACAATTCAGCTTCTCTCACAAGTCACATTCTTTGTAGAT AATGGCAGATATTTCGCACCTTGAAAGAATGGGAAGAGAGCTCAAATGCCCCATTTGCTT GAGTCTGTTCAATTCTGCTGTTTCACTTACATGTAATCATGTATTTTGCAATTTATGTAT TCAAACTGGTATGAAATCTGGATCCAATTGTCCGGTGTGCAAAGTTCCATTTCATCGCAG AGAAATCCGACCTGCTCTCCACATGGATAACTTGGTGAGCATCTATAAGAACATGGAAAT TGCTTCAGGAGTCAATATGTTTCTCACTCAATCCAATCCTTCCACAAAATTACCAGGGGA AAACACTCGATCTAATGGCGAAAAAGTTTGTGGATTCCAAGAGACACCTAAAACTGTAAC AGAAGCTCCAGCGACAGACAATCAGAAAAGAAAAAGAGGGAAAGGATCAAAAAGATCTTC AGGGTGCAACAAAAAAATTTCCGGATCAAATCTTATTAGACCTTCTTTTCCAACAAAGAA GAGAGTACAGGTGCCACAATATCCACCTTCAGAGACTCCACCACCTACAAAGTTAGTTGA TGGAAATGGCAAATCCATCACCGATGAAGTTCAGAAACCATTGGTAATTGAGAGAGATAG GTCTATGCTAAATGAAAAAGGAGAACCTGTGCTATCTCCATTCTTCTGGCTGAGAGAAGA GGATGTAGATAAATCAAGTCAGCAAACAGATGGGGACGTTATCATGGATACTCCTCCAGC TTTTCCATCCTTCAGCGATATGAAAGACTTGGATGATGAGGTTCACTGCGAAATGACTCC AAAAAGTGGACCCTATGATGCAGCAAATGGAGCAGATCTTTTTGACAGTGAGATGTTTGA CTGGACACAAAGAGCTTGCTCCCCTGAACTTTGTTCTAGTCCCTTTAAGATGAAGCTTAA GGATACTATTGATTCTGCTGAAGCTCAGGAAAAGACTCAAGCTCACTCAGTTGAGGAAAG TGACATTAATGCATCAGCAACTGAAAACAGAACAGCTGTGGAAAATGAAAAGGGTACTGA TAAAGGACAGCTGAGTTCACCCGCGATATTTTCTCCTGTAAATAAAACCACTAGTAGAAA AGACGTTGTTTGCAAGTCTAGCAGGAGCAAGTCATTGAGAAGTAGCCAGAAGAAACAAGG AAAAAACATAATTGGAGAATTATCAGAAGTTCATGATGCTTCACTAAAAGCAGCTGAAAA CACTATGAAGAACAATCAGGATAATGCCAATGCATTTATCTCGAATAAGAAGGATTCGAA AAACAAGAAAAAGGGTAGATCCTCTAGAAATGTCACTGAGTCAGTTGTAGAAGACATTTC CACTTCATGTGGTGCTAAAAGACTTCGCAAGGGCAATAACTCAAAGTCCTTCAACTTGTC TACTATTGTGAATCAGGAAAAACATAGTGAAGGAAGTGTCGAGACACTTGACTTGAAGAC GCATAATATATTCCGCAAGGGATCATTACGTGAACAAGCTAAAAACTGTTTTGGACCAAA AGGCGGAAAGAAAACTGCTGTGTGTAACATTCCACAAATTCAAGATGAAGCTTTGCCTTT CGAATCAGCAAATAGATTGATTCCCATGGATAACAAGAAACCTACTCGTAGTACAAAACT GAAGAAATGTGAGCTTGGTAGTGACAACAAGCTTCATGGGAAGAAAAAAGTGAAGTTTTC TGATGATGGGCAGCTTGCTGACAAGGATAATATTACGCTTCAAAAGATTCAGAAGAGAGT GCTCAATTCATTGGAAACAGATAAATCTGTTTTGAACTCGAATGATTCAGTTTTGCAGAA GTGTGAGGCAAGCCAAAGCAAAATACAATGTGCTTTCTGCCGTTCAGCAGAGATATCTGA GGTTTCAGGAATCATGGTAAGCTACCTTAATGGAAACCCTGTCAAAGAAGATGTCAATGG AGCACCAGGTGTTATACATGTTCACAAATATTGTGCAGAATGGGCCCCTAATGTATATTT TGGAGACGATGATGTGGTCAACCTTGAATCTGAACTGAAGAGGAGTCGAAGGATCACTTG TTTTTTCTGTGGAGTAAAGGGGGCAGCTCTTGGGTGTTATGAGATGAGTTGTCGCAAAAG CTTTCATGTTCCTTGTGCCAAATTGACACCAGAGTGTAGATGGGATTCTGATAACTTTGT TATGTTATGCCCTTTGCATGCTAACTCTAAGTTGCCATCCGAGATCCCAGGAAAACAGAC AAAGATTGGAGATAGCATTAAAAGAAATTCTCGTATCCACCAACCCAATGTCTCAGCAAC ACCTGATAATGGTGCTACTTTGCAGTGGAAGTCTCAGAAGAAGAATAAGAACTTAGTGCT CTGTTGTTCAGCTCTAACCGCAGATGAAAAAGAGCTTGTTTCTAAATTAAAGAGGTTGTC TGGCGTGACAGTAGTCAAGAACTGGGACCTAAGTGTCACCCATGTCATTGCTTCTACTGA TGAGAAAGGAGCATGCCGAAGAACTCTCAAGTATTTGATGGGTGTCTTGGCTGGGAAATG GATAATGAGCATCAACTGGATTATTGCTAGCTTGGAAGCCACAGAATATGTCGATGAACA ACAATACGAGATTAAAATAGATACTCATGGCATTGTGGATGGGCCTAAGCTTGGAAGATT GAGGATTTTAAACAAGCAACCAAAGCTTTTCAATGGATACAAGTTCTTTTTTATGGGCGA CTTTTTATCTTCATACAAGAGCTACCTACATGACCTTGTTATTGCTGCTGGAGGAATTGT CCTTAACAGGAAGCCTATTGCACTGGATCAGGAAATTCTTTCACCCGGATGCCCTCTACT GTTTGTAATTTATAGTCATGAACAACTTGATCAGTGCGAAGGAAGTGAAAAAATTTCAAT TATAGCGCGCAGAAGATCTAATGCAGAAGTTTTGGCTAGTTCAACTGGAGCTGTAGCTGC CAGCCACTCCTGGATTCTAAACTGCATTGCTGGCTCTAGGTTGTTGGAGCTGGAATAGTG TAAAATTTCTACCCATGCTTCACATCATGCAACAAGACTTGTTTTTTTTTCATCTGCCAT TATATAAAACTAAATATTTTCCAAATGACTGTTCATGTCTTTGATCATTCAGTTACTTGT ACCCCAAAAAGTCGTGTTTTTTTCTTCTGTTGATGTACAAGTTAAATATTAAATGAAAAT CTAGTTCAGTTTGTGTT