Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g016720.1.1

CDS Infomation

9-cis-epoxycarotenoid dioxygenase2

Sequence

ATGACTTCTACAATTGCAAATTATAGAGTTTCTCACTCCTTTTCACCATCTACTTCCTAT
TCACTTGATTTCACCCTTCCTTCAAAATCAATCTCCATGAAAAATCACACTACAACAAAA
ACTAAAATCCATTCTGCTTTACTCACTTTACCGAAACAAAACAATACCCCCAAAAATCAA
CCACAATTTCAAACATCTCATTGGAATTTTTTCCAAAAAGCAGCAGCAAAAGCTTTAGAT
ATAGTAGAAAGCGCGTTAGTCTCACGCGAACTACAAAACCCACTTCCCAAAACAGCTGAC
CCACGTGTACAAATCGCCGGAAACTTTGCTCCGGTACCGGAGCAATCAGTCCGGCATAAC
CTTCCCGTTACAGGGACGATCCCTGATTGCATTAATGGGGTTTATGTCAGGAATGGAGCG
AACCCGCTTTTTGAACCGGTTGCCGGTCATCATCTTTTTGACGGTGACGGCATGGTTCAT
GCTGTCACTGTCGAAAATGGTTCAGTGAGCTATTCTTGCCGTTTTACTGAAACGGAAAGA
TTAGTTCAAGAGCGTGAATTGGGTCACCCTGTTTTTCCTAAAGCTATTGGTGAACTCCAT
GGTCATTCTGGAATTGCGAGGCTATTGTTGTTCTATGCCCGTGGAGTTTTCGGGCTTGTA
GATCATAGCCATGGGACTGGAGTTGCTAATGCTGGATTGGTTTTCTTTAATAACAGGCTT
TTAGCAATGTCTGAAGATGATGTACCTTATCATGTTCAAGTATTGCCTTCTGGCGATCTT
CAAACAGTTGGTAGGTACAATTTTGATGATCAATTGAAAAGCACAATGATAGCTCACCCG
AAAATTGATCCAGTTTCGGGTGAGCTTTTTGCTTTGAGCTACGATGTAGTTCAAAAGCCT
TACTTGAAATCCTTCAAGTTTTCTCCAGACGGGGAAAAATCTCCCGATGTTGAAATCCCA
CTGGATGTTCCAACGATGATGCATGATTTTGCGATTACCGAGAATTACGTTGTAATTCCT
GATCAGCAAGTTGTGTTTAAGCTTCAAGAAATGATCAAAGGAGGCTCCCCTGTGATTTAT
GACAAAAATAAGAAATCAAGGTTCGGAATTCTACCCAAAAATGCTGAAAACTCTGAGAAT
ATTATTTGGGTTGAATCAGCCGAAACGTTCTGTTTTCACCTATGGAATGCTTGGGAAGAA
CCAGAAACAGATGAAGTCATTGTTATTGGTTCATGCATGACACCACCAGACTCAATTTTC
AATGAATGTAATGAGAATTTAAAGAGTGTTTTATCTGAAATAAGGCTCAATTTGAAGACA
GGAGAGTCTACAAGACGACAACTACTTTCACCCTCAGATCAGGTAAATTTAGAAGCTGGA
ATGGTGAACAGAAACAAACTCGGTAGAAAAACACAATTCGCTTATCTTGCAATTGCAGAG
CCATGGCCAAAAGTATCTGGATTTGCAAAAGTCGATTTATCGACAGGGGAAATTAAAAAA
CATATATATGGAGATAAACGATATGGAGGTGAACCATTATTTTTACCAAGAAATGTGAAC
TCAGAAAAAGAGGACGATGGATATATTCTTGCATTTTGCCACGACGAGAAGACATGGAAA
TCAGAACTACAAATTGTAAATGCCATGACTCTAGAATTAGAAGCTACTGTCAAGCTACCT
TCAAGAGTTCCATATGGTTTTCATGGGACATTCATTAGCTCAAAGGACTTGCAAAATCAA
GTATAA

Peptide Sequence

PEP ID

Solyc08g016720.1.1

PEP Infomation

9-cis-epoxycarotenoid dioxygenase2

Sequence

MTSTIANYRVSHSFSPSTSYSLDFTLPSKSISMKNHTTTKTKIHSALLTLPKQNNTPKNQ
PQFQTSHWNFFQKAAAKALDIVESALVSRELQNPLPKTADPRVQIAGNFAPVPEQSVRHN
LPVTGTIPDCINGVYVRNGANPLFEPVAGHHLFDGDGMVHAVTVENGSVSYSCRFTETER
LVQERELGHPVFPKAIGELHGHSGIARLLLFYARGVFGLVDHSHGTGVANAGLVFFNNRL
LAMSEDDVPYHVQVLPSGDLQTVGRYNFDDQLKSTMIAHPKIDPVSGELFALSYDVVQKP
YLKSFKFSPDGEKSPDVEIPLDVPTMMHDFAITENYVVIPDQQVVFKLQEMIKGGSPVIY
DKNKKSRFGILPKNAENSENIIWVESAETFCFHLWNAWEEPETDEVIVIGSCMTPPDSIF
NECNENLKSVLSEIRLNLKTGESTRRQLLSPSDQVNLEAGMVNRNKLGRKTQFAYLAIAE
PWPKVSGFAKVDLSTGEIKKHIYGDKRYGGEPLFLPRNVNSEKEDDGYILAFCHDEKTWK
SELQIVNAMTLELEATVKLPSRVPYGFHGTFISSKDLQNQV*

Transcript Sequence

Transcript ID

Solyc08g016720.1.1

Transcript Infomation

9-cis-epoxycarotenoid dioxygenase2

Sequence

ATGACTTCTACAATTGCAAATTATAGAGTTTCTCACTCCTTTTCACCATCTACTTCCTAT
TCACTTGATTTCACCCTTCCTTCAAAATCAATCTCCATGAAAAATCACACTACAACAAAA
ACTAAAATCCATTCTGCTTTACTCACTTTACCGAAACAAAACAATACCCCCAAAAATCAA
CCACAATTTCAAACATCTCATTGGAATTTTTTCCAAAAAGCAGCAGCAAAAGCTTTAGAT
ATAGTAGAAAGCGCGTTAGTCTCACGCGAACTACAAAACCCACTTCCCAAAACAGCTGAC
CCACGTGTACAAATCGCCGGAAACTTTGCTCCGGTACCGGAGCAATCAGTCCGGCATAAC
CTTCCCGTTACAGGGACGATCCCTGATTGCATTAATGGGGTTTATGTCAGGAATGGAGCG
AACCCGCTTTTTGAACCGGTTGCCGGTCATCATCTTTTTGACGGTGACGGCATGGTTCAT
GCTGTCACTGTCGAAAATGGTTCAGTGAGCTATTCTTGCCGTTTTACTGAAACGGAAAGA
TTAGTTCAAGAGCGTGAATTGGGTCACCCTGTTTTTCCTAAAGCTATTGGTGAACTCCAT
GGTCATTCTGGAATTGCGAGGCTATTGTTGTTCTATGCCCGTGGAGTTTTCGGGCTTGTA
GATCATAGCCATGGGACTGGAGTTGCTAATGCTGGATTGGTTTTCTTTAATAACAGGCTT
TTAGCAATGTCTGAAGATGATGTACCTTATCATGTTCAAGTATTGCCTTCTGGCGATCTT
CAAACAGTTGGTAGGTACAATTTTGATGATCAATTGAAAAGCACAATGATAGCTCACCCG
AAAATTGATCCAGTTTCGGGTGAGCTTTTTGCTTTGAGCTACGATGTAGTTCAAAAGCCT
TACTTGAAATCCTTCAAGTTTTCTCCAGACGGGGAAAAATCTCCCGATGTTGAAATCCCA
CTGGATGTTCCAACGATGATGCATGATTTTGCGATTACCGAGAATTACGTTGTAATTCCT
GATCAGCAAGTTGTGTTTAAGCTTCAAGAAATGATCAAAGGAGGCTCCCCTGTGATTTAT
GACAAAAATAAGAAATCAAGGTTCGGAATTCTACCCAAAAATGCTGAAAACTCTGAGAAT
ATTATTTGGGTTGAATCAGCCGAAACGTTCTGTTTTCACCTATGGAATGCTTGGGAAGAA
CCAGAAACAGATGAAGTCATTGTTATTGGTTCATGCATGACACCACCAGACTCAATTTTC
AATGAATGTAATGAGAATTTAAAGAGTGTTTTATCTGAAATAAGGCTCAATTTGAAGACA
GGAGAGTCTACAAGACGACAACTACTTTCACCCTCAGATCAGGTAAATTTAGAAGCTGGA
ATGGTGAACAGAAACAAACTCGGTAGAAAAACACAATTCGCTTATCTTGCAATTGCAGAG
CCATGGCCAAAAGTATCTGGATTTGCAAAAGTCGATTTATCGACAGGGGAAATTAAAAAA
CATATATATGGAGATAAACGATATGGAGGTGAACCATTATTTTTACCAAGAAATGTGAAC
TCAGAAAAAGAGGACGATGGATATATTCTTGCATTTTGCCACGACGAGAAGACATGGAAA
TCAGAACTACAAATTGTAAATGCCATGACTCTAGAATTAGAAGCTACTGTCAAGCTACCT
TCAAGAGTTCCATATGGTTTTCATGGGACATTCATTAGCTCAAAGGACTTGCAAAATCAA
GTATAA