Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g015730.2.1
CDS Infomation

F-box family protein (AHRD V3.3 *** B9GFH4_POPTR)
Sequence

ATGGCATCGATCGGAGGAGGAGACCGGCTGACTAATCTGCCGGAGGAGATTTTACTCCAA
ATCCTCTCTGTGTTACCGAACAGTAGACAAGTTGTTCAAATGAGCGTATTATCATCGCAA
TGGCGATTTCTTTGGAAATCCATCCCGGCATCACTCTATTTCAACTCAGAAGATTATCTT
AACCCTGACGACGAAGAATATACTATGGCTTACGCAGCCTGTGTTAATAGAGAGCTTCAT
TATTGGAGGTCTTGCGAGAAAATAAAATCATTTAGGGTTTTCCCTCAGAGTTACGAGGAG
CTTATTAAACATGATGTTGATTTGTGGGTGAACTTTGCTGTTAATGTAGGATATTGCCGT
TTGAGACCTTCTGGTAATGTGAAATGGAGCAATTTGGTTTCTCTTTCGATTGGGGATGCG
GTTATGACAGAGGGTGTAATGGAAAAAGTATTATCAGGATGTCCTAATTTGGAGTGCTTG
GAATTAGATAAAGTTGTTGGTGTTCGTCGTCTGGATATCACCTCTGTGAAGCTGAGAAAA
TTGATCGTAACGATTTATGAAACAGAATCTGATGATGACGATGAAGACCATTGCCTCAAA
ATTCATGCCCCACATATTCTACATTTAGAACTTTTGGGATTGTGTTACGATAAGATACAC
TTTCAGCTGAGAAATGTGGTTTCACTTGTCACTGCAGTCCTTTCTTTAAATGTTCATTTC
GCCGACCTTGAAGAGAATTTGGAGAAGGAGTGTAGATATTTACAGGAACTTCTTCACCAC
GTTGCCAATGTCAAGAATCTTGAATTGGGTCCCTGGTGTATCGAGTGTCTGTCCATACTG
GAGTTCAAAGGGTGGCCTGTTCCACCATCAAGCTGGAAGTTCTTAAAAATTAACGCAGCC
TTAGAACCTAATGACTATCCTGGAATTTGCAGCTTTCTGTCGAGTTCATCATGTCTTGAG
ACATTGGTCATTGACTGGTGCCATCCTAAACCAAGAAAATTGCTGTCAATGTACACCAAT
GAGGATGAACGACGGAGGATATTTGAAATACATAGTTTTAACTGGTCAATGCCACATCTA
AAGATGTTCAAGTTCATTAACTTTTGTGGAAAATCAAGTGAAAATAAGTTTGTAGATCTA
TTGATCAAATGTTTGCGCGAGAATGCGATAGCACTAAAGAAGTATGGCATTGCTTTAAAA
TTCAAAGGGAGAGATGTGTTTTGGAGTTATGTCGTCAGGAGTTCCTAA

Peptide Sequence

PEP ID

Solyc08g015730.2.1
PEP Infomation

F-box family protein (AHRD V3.3 *** B9GFH4_POPTR)
Sequence

MASIGGGDRLTNLPEEILLQILSVLPNSRQVVQMSVLSSQWRFLWKSIPASLYFNSEDYL
NPDDEEYTMAYAACVNRELHYWRSCEKIKSFRVFPQSYEELIKHDVDLWVNFAVNVGYCR
LRPSGNVKWSNLVSLSIGDAVMTEGVMEKVLSGCPNLECLELDKVVGVRRLDITSVKLRK
LIVTIYETESDDDDEDHCLKIHAPHILHLELLGLCYDKIHFQLRNVVSLVTAVLSLNVHF
ADLEENLEKECRYLQELLHHVANVKNLELGPWCIECLSILEFKGWPVPPSSWKFLKINAA
LEPNDYPGICSFLSSSSCLETLVIDWCHPKPRKLLSMYTNEDERRRIFEIHSFNWSMPHL
KMFKFINFCGKSSENKFVDLLIKCLRENAIALKKYGIALKFKGRDVFWSYVVRSS*

Transcript Sequence

Transcript ID

Solyc08g015730.2.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** B9GFH4_POPTR)
Sequence

TACATTGCTAGCAATACCCGAAATTCCTAAAATGCTCCTCAAGTTCCGAGCTTGGTAAAT
AAGGACATGGTTCAATCTTTTCTTTCTGCCTTGTTGTGATAAGGGGGATATGTTTTTGCA
TACCGGCCAAGTTTATCAATTTTTTGAAAATGATAAAAAGAAAGGTAGGCTAAAATAGAG
AGGAAAATCGTTAATAGAGAATCAAAATCAATTTACCGATAAATTATGTGATTCTTTTCA
TCCATTCTAGTGTTGCTGGTAAAGGTATTCCAAAAATTTGTTAAAGATGCATAAAAGTTA
GCCCAAACACCATATTTATTGGGTAAAACTTACCCGCATTGGTGTTTACCACCATGCCAA
TACTTAATGTGTTTATAGTTCATTTTATCCAAGTAGCCAATTTATACTTATATTCAACTA
TGATTTTTCATGTGTAAGCACAATGTATTTTATCTCACATTTGCTTCTTATTTTGGACAT
TTTTCTTTTCTTCTTAAATTTTTTTCTCTCGTTTAGTTTTGGGCACATAAATCATAGTTG
CATAAACCGCCATTACTCTCATTTCAATTCGCCATTACCAAAACTGCACTTGAGAAGAAA
ATCATGGCATCGATCGGAGGAGGAGACCGGCTGACTAATCTGCCGGAGGAGATTTTACTC
CAAATCCTCTCTGTGTTACCGAACAGTAGACAAGTTGTTCAAATGAGCGTATTATCATCG
CAATGGCGATTTCTTTGGAAATCCATCCCGGCATCACTCTATTTCAACTCAGAAGATTAT
CTTAACCCTGACGACGAAGAATATACTATGGCTTACGCAGCCTGTGTTAATAGAGAGCTT
CATTATTGGAGGTCTTGCGAGAAAATAAAATCATTTAGGGTTTTCCCTCAGAGTTACGAG
GAGCTTATTAAACATGATGTTGATTTGTGGGTGAACTTTGCTGTTAATGTAGGATATTGC
CGTTTGAGACCTTCTGGTAATGTGAAATGGAGCAATTTGGTTTCTCTTTCGATTGGGGAT
GCGGTTATGACAGAGGGTGTAATGGAAAAAGTATTATCAGGATGTCCTAATTTGGAGTGC
TTGGAATTAGATAAAGTTGTTGGTGTTCGTCGTCTGGATATCACCTCTGTGAAGCTGAGA
AAATTGATCGTAACGATTTATGAAACAGAATCTGATGATGACGATGAAGACCATTGCCTC
AAAATTCATGCCCCACATATTCTACATTTAGAACTTTTGGGATTGTGTTACGATAAGATA
CACTTTCAGCTGAGAAATGTGGTTTCACTTGTCACTGCAGTCCTTTCTTTAAATGTTCAT
TTCGCCGACCTTGAAGAGAATTTGGAGAAGGAGTGTAGATATTTACAGGAACTTCTTCAC
CACGTTGCCAATGTCAAGAATCTTGAATTGGGTCCCTGGTGTATCGAGTGTCTGTCCATA
CTGGAGTTCAAAGGGTGGCCTGTTCCACCATCAAGCTGGAAGTTCTTAAAAATTAACGCA
GCCTTAGAACCTAATGACTATCCTGGAATTTGCAGCTTTCTGTCGAGTTCATCATGTCTT
GAGACATTGGTCATTGACTGGTGCCATCCTAAACCAAGAAAATTGCTGTCAATGTACACC
AATGAGGATGAACGACGGAGGATATTTGAAATACATAGTTTTAACTGGTCAATGCCACAT
CTAAAGATGTTCAAGTTCATTAACTTTTGTGGAAAATCAAGTGAAAATAAGTTTGTAGAT
CTATTGATCAAATGTTTGCGCGAGAATGCGATAGCACTAAAGAAGTATGGCATTGCTTTA
AAATTCAAAGGGAGAGATGTGTTTTGGAGTTATGTCGTCAGGAGTTCCTAA