Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g015670.3.1
CDS Infomation

Glucose-1-phosphate adenylyltransferase, putative (AHRD V3.3 *** B9T528_RICCO)
Sequence

ATGTACAAAAAATATTCACTCATGTCTCTTCCTACTTGGTTAAATCTCAAGATTAAGTCC
CCTCATGAGTATAGATACAAGCCTACATCTAGGCTCATTCCATCTTCTATTCCATCAAAG
TTGAATCTACCATATACAAATCACTCTGAATGTCCAAACATTCTATGTCCTCCAATAGAC
CAGTTGAGCCTGGACAAATATATCGTGTTACTATTTTCTACTGATTTTAAAAAAAATATC
AATGTTCCAAGAACCTATAATGTAGATTTCCATGTTTACTATTGTTGGCAGAATGTTGCA
GCAATAGTGTTTGGAGATGGATCAAATTCAAAACTTTATCCATTGACAAAGAGGAGATCA
GAAGCTGCACTTCCTATAGCAGGAAACTACAGGCTCATTGATGCAGTTATCAGTAACTGC
ATCAACAGTAATATCAAGAAGATTTATGCACTTACACAGTTTAACTCTGCCTCTCTGAAT
TCTCACCTTTCAAGAGCTTATTCCTCTGCACACATCAGAAACGAACCATTAGTTGATGTC
ATTGCTGCTTATCAGAGTCCTGAAGGCAAGGGCTGGTTTCAGGGAACTGCTGATGCGATA
AGAAGATGTTTGTGGATTCTAGAAGAGTATCCGATTGTAGATTTTCTGGTTCTTCCTGGT
TACCATCTTTACAAAATGGATTTCCAGGAACTCTTAAAGGTCCACAGCAACAACAAAGCC
GATATAACTGTTGCAGTGTTGAGCAGAAGGACGGATAAAGATGTAGAACTTGGTACTTTC
CAAGTAAATTCTGGAAATCAAGTCATTTCGTTCAAAGACAATCCGGAGGTACAAAATTCA
GACATTTCTCATGATAAGTATGCTGGTATGGATATCTATGTTGTTAACAAAGATGCCATG
ATAAAGCTTCTTACAGAGTATCACCCCATGGCCAATGACTTCAGAAGAGAAGTTGTACCA
GGTGCAATTTCCTTAGGAATGAATGTATATGCACACAAATTCAGTGGCTACTGGGAGGAC
ATGAGAACCATTGAAGCTTACTACCAAGCAAATATGGAAAGCATAAAGAACACAAAGTAC
ACATATAGCTTGTATGACAAAGAATCTCCCCTATACACTTTGCCTCGACACCTTCCTCCA
ACTCAGATAACTGATGCTGCTATAACAGACTCTGTGATCGGAGACGGATGCTTTCTCAAT
AGATGCAAGATCAGAGGTACTGTCGTCGGCATGAAGACAAGGGTAGGAGATGGAGCGATA
ATTGAGGATTCAGTAATAATGGGATCTGATACTTACCAAAGTGGTCGCGTAGAGGAGGAT
ATACACATTCCTATTGGAATTGGAGAAGGCTCACAGATAAAGAAAGCAATAATTGATAAG
AATGTGAGAATTGGCAAAAATGTTAAGATATTGAACAAGGAAAATGTTCAAGAGTGCAAT
AATGAAGCAAATGGTTACATTATAACCAAAGGCATAGTTGTAATAATGAAGGGTGCCATT
ATTCCAGATGGGAGCATTCTGTGA

Peptide Sequence

PEP ID

Solyc08g015670.3.1
PEP Infomation

Glucose-1-phosphate adenylyltransferase, putative (AHRD V3.3 *** B9T528_RICCO)
Sequence

MYKKYSLMSLPTWLNLKIKSPHEYRYKPTSRLIPSSIPSKLNLPYTNHSECPNILCPPID
QLSLDKYIVLLFSTDFKKNINVPRTYNVDFHVYYCWQNVAAIVFGDGSNSKLYPLTKRRS
EAALPIAGNYRLIDAVISNCINSNIKKIYALTQFNSASLNSHLSRAYSSAHIRNEPLVDV
IAAYQSPEGKGWFQGTADAIRRCLWILEEYPIVDFLVLPGYHLYKMDFQELLKVHSNNKA
DITVAVLSRRTDKDVELGTFQVNSGNQVISFKDNPEVQNSDISHDKYAGMDIYVVNKDAM
IKLLTEYHPMANDFRREVVPGAISLGMNVYAHKFSGYWEDMRTIEAYYQANMESIKNTKY
TYSLYDKESPLYTLPRHLPPTQITDAAITDSVIGDGCFLNRCKIRGTVVGMKTRVGDGAI
IEDSVIMGSDTYQSGRVEEDIHIPIGIGEGSQIKKAIIDKNVRIGKNVKILNKENVQECN
NEANGYIITKGIVVIMKGAIIPDGSIL*

Transcript Sequence

Transcript ID

Solyc08g015670.3.1
Transcript Infomation

Glucose-1-phosphate adenylyltransferase, putative (AHRD V3.3 *** B9T528_RICCO)
Sequence

ACCAAACAGGCAAGTATATATATATATATACTCATTAACTTTATCCAAGATTTTGCTAAT
TAGACTTTGCTTCTTTATTCAACATTAGTAATTTCTTATAATAAACTTTTCTGTTCTACA
AAACAAAAGCTTCTCAGTATTAGTTGTAAAGCTAATTATGCTAAGACAAACATTATTATA
AAAAGAATTAAATAGTCCATCTTTAAACATATTAATATTAGATATGAAATTTGCTTGACA
TAGAATGTAGAGGGGAAAATATATCACAAGACACAAAAGCAGAGACAATGCCTACCTTCA
TATCCACTCCATTCCCATTTGCCAAAAAAATAGAGGCAAAAACCTTCAAAAGATTCCTTT
CAAACTTTCAAACATTGTCAATCACATCATGCTAAACCCCCCCCTCCTGTACTCTATCGA
TCAGTAGAGTACATATGATTTTGTAAGGTATCAAATATTTACTTTATATTATTTTCACAT
GATATCACTCAGACCACTATACATACATAGATTAGTTATTAATAGGCATTCGTACATCAT
CGATTGTACAATATTATTCCACATCCAATTCTTTTGGTTAATTTGTTGTTCAAACAAGAA
GTTAAATACGAAGGAAAAAAATCAAAATAAAAAGCGTTCATTATAAGCTCGAGAATTAAT
GTGTATTCGAATCATACATTGGTGATGTATTTATTCTTGTTTTTATACTTCTTCTTTTTT
TTTTTTGTAAAGCAAAATGAACGATAATCATTACTAAAATATGCTACCTCCTAATAAGAA
TAAGAGTAAAGGAAAAATATTGAACCAAATGAATAACAAAACTATCATATGAAAGAGAAA
AAAGAATAAAAAAGTTGAAAATTATATGTTATATGTGTAAAGAGAAGTTTAGAATCAAAG
TTAAACATAGAACCAAAGGAAGAAAGAAAAAAATTAGAAACATTTAAAATAGATTTATTT
ATTTATGATATTACAACATGCTCACTTTAAGCTAAGTAATGAGAGGACAAATATTCTTGA
TGGGACTTGCTTGCATGGCTAAATATTCCCTTCTTAAATTGATGTGACATAACACAAAAA
AGGCAAAGTATATAAACCACCAATTAGGTGATTTTGATGTACAAAAAATATTCACTCATG
TCTCTTCCTACTTGGTTAAATCTCAAGATTAAGTCCCCTCATGAGTATAGATACAAGCCT
ACATCTAGGCTCATTCCATCTTCTATTCCATCAAAGTTGAATCTACCATATACAAATCAC
TCTGAATGTCCAAACATTCTATGTCCTCCAATAGACCAGTTGAGCCTGGACAAATATATC
GTGTTACTATTTTCTACTGATTTTAAAAAAAATATCAATGTTCCAAGAACCTATAATGTA
GATTTCCATGTTTACTATTGTTGGCAGAATGTTGCAGCAATAGTGTTTGGAGATGGATCA
AATTCAAAACTTTATCCATTGACAAAGAGGAGATCAGAAGCTGCACTTCCTATAGCAGGA
AACTACAGGCTCATTGATGCAGTTATCAGTAACTGCATCAACAGTAATATCAAGAAGATT
TATGCACTTACACAGTTTAACTCTGCCTCTCTGAATTCTCACCTTTCAAGAGCTTATTCC
TCTGCACACATCAGAAACGAACCATTAGTTGATGTCATTGCTGCTTATCAGAGTCCTGAA
GGCAAGGGCTGGTTTCAGGGAACTGCTGATGCGATAAGAAGATGTTTGTGGATTCTAGAA
GAGTATCCGATTGTAGATTTTCTGGTTCTTCCTGGTTACCATCTTTACAAAATGGATTTC
CAGGAACTCTTAAAGGTCCACAGCAACAACAAAGCCGATATAACTGTTGCAGTGTTGAGC
AGAAGGACGGATAAAGATGTAGAACTTGGTACTTTCCAAGTAAATTCTGGAAATCAAGTC
ATTTCGTTCAAAGACAATCCGGAGGTACAAAATTCAGACATTTCTCATGATAAGTATGCT
GGTATGGATATCTATGTTGTTAACAAAGATGCCATGATAAAGCTTCTTACAGAGTATCAC
CCCATGGCCAATGACTTCAGAAGAGAAGTTGTACCAGGTGCAATTTCCTTAGGAATGAAT
GTATATGCACACAAATTCAGTGGCTACTGGGAGGACATGAGAACCATTGAAGCTTACTAC
CAAGCAAATATGGAAAGCATAAAGAACACAAAGTACACATATAGCTTGTATGACAAAGAA
TCTCCCCTATACACTTTGCCTCGACACCTTCCTCCAACTCAGATAACTGATGCTGCTATA
ACAGACTCTGTGATCGGAGACGGATGCTTTCTCAATAGATGCAAGATCAGAGGTACTGTC
GTCGGCATGAAGACAAGGGTAGGAGATGGAGCGATAATTGAGGATTCAGTAATAATGGGA
TCTGATACTTACCAAAGTGGTCGCGTAGAGGAGGATATACACATTCCTATTGGAATTGGA
GAAGGCTCACAGATAAAGAAAGCAATAATTGATAAGAATGTGAGAATTGGCAAAAATGTT
AAGATATTGAACAAGGAAAATGTTCAAGAGTGCAATAATGAAGCAAATGGTTACATTATA
ACCAAAGGCATAGTTGTAATAATGAAGGGTGCCATTATTCCAGATGGGAGCATTCTGTGA