Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g015650.3.1
CDS Infomation

La-related protein 7 (AHRD V3.3 *** W9RF44_9ROSA)
Sequence

ATGGCTATGGAAGAATCGGCAATTGCCGTTGATTTACTCACCGATTCATCGGCTACATCT
CTACCGTCTGATCACACAGACTCTTGTTCTTCACCTTCTGATCTCCCTTCCCCCACGGCC
ACCAGACTTAACGCCTTGGCGCCGGCATTCGTTCCGCGGTCGATTTCTCCTACGCCATCT
TTGAACGATTTGAATCAGGCTGATTTTCATCCGCTTCCGAACCATTATGTATATGCTCCT
CAGTTGCAGGTTCAGTATCCATCACCGTATTATGGCGGTGGTGGTGGTGGTGTAGCTGAT
GTAGATCATGCTAGTGCTAGTAAACGTGGAGGGTTAACTGATGAAGCTGCGCAAAAGATT
GTTAATCAAGTGGAGTTCTATTTCAGTGATTTAAATTTGGCAACAACTGATCATTTAATA
AAGCATATGCTCAAGGATCAGGAAGGTTATGTACCAATATCTGTAGTTGCGTTGTTCAAG
AAGATTAAAGCTCTTATACGTAATCATGCACAGCTTGCTCAAGTTCTGCGGAGCTCTACA
AAGCTGGTTGTTAGTGAGGATGGAATGAAGGTTAAACGCAAAATTCCTTTGGCCGAAACC
GACTTAAAAGAACTGCAATCTCGAATTGTGATTGCTGAAAATTTGCCTGAGGATCATTGC
CATCAGAATCTCATGAAGATTTTCTCAGCAGTTGGAAGCGTTAAAATGATACGCACCTGC
TTACCTCAGTCTTCCAATGGTGGGGCATCTTCAGGATCTAGAACAGCAAAGTCAGATAGT
ACTCTTCACAGCAACAAGTTACACGCATTTGTGGAATACGAAACCGCCGAATTGGCTGAG
AGGGCGGCTGTAGAGTTAAATGATGATAACTGGAGAAATGCTCTGGAAGTCCGATTACTT
CTTAGAAGCTCAGAAAAATCTGGTCAAGCTCAAGGGAAAAAAGCTGGTCATGATAGTGAA
AACTTCAAGGGGGATGATGGTTCTGCATTAGAGGTCAACGAGAAGCTTAATGAAGAGTCA
CGCCACCATATTGATGCTAAATCCAATGAGCTTGCAGAGGAGCATGGCAGTGATGGGCAG
AGGCGTGGGCGTGGTCAGGGTCGGGGTCGGGGTAAGGGACAGGGTCAGAGACGTGGACGT
CCGCAGTCTCATCAAAACAATCGTGGAGGTCATTTAGGAGCTCCCTTATCAAACGTGAAT
CGTGGAAGTAATGTGCGAAATTCCCTCTCAAATATCATCCGTGTTGGTGTAGGGAAGCCT
GTTCTTGAGCAGTCAGCAGCAGCCAAGCAATCTTCTGTACCTCGTATGCCAGATGGTACT
AAGGGATTCTCCATGGGCCGAGGCAAATCGACGCCTATTATAACTATGTGA

Peptide Sequence

PEP ID

Solyc08g015650.3.1
PEP Infomation

La-related protein 7 (AHRD V3.3 *** W9RF44_9ROSA)
Sequence

MAMEESAIAVDLLTDSSATSLPSDHTDSCSSPSDLPSPTATRLNALAPAFVPRSISPTPS
LNDLNQADFHPLPNHYVYAPQLQVQYPSPYYGGGGGGVADVDHASASKRGGLTDEAAQKI
VNQVEFYFSDLNLATTDHLIKHMLKDQEGYVPISVVALFKKIKALIRNHAQLAQVLRSST
KLVVSEDGMKVKRKIPLAETDLKELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKMIRTC
LPQSSNGGASSGSRTAKSDSTLHSNKLHAFVEYETAELAERAAVELNDDNWRNALEVRLL
LRSSEKSGQAQGKKAGHDSENFKGDDGSALEVNEKLNEESRHHIDAKSNELAEEHGSDGQ
RRGRGQGRGRGKGQGQRRGRPQSHQNNRGGHLGAPLSNVNRGSNVRNSLSNIIRVGVGKP
VLEQSAAAKQSSVPRMPDGTKGFSMGRGKSTPIITM*

Transcript Sequence

Transcript ID

Solyc08g015650.3.1
Transcript Infomation

La-related protein 7 (AHRD V3.3 *** W9RF44_9ROSA)
Sequence

TACTTGTCTAGGAAAATCCTATTCATTGTTTTCTCTATGAATGAATGAATGAACTAAAAA
AAAAATTCTAAACCCTAACAAGATTTTCATCGGTTATGGCTATGGAAGAATCGGCAATTG
CCGTTGATTTACTCACCGATTCATCGGCTACATCTCTACCGTCTGATCACACAGACTCTT
GTTCTTCACCTTCTGATCTCCCTTCCCCCACGGCCACCAGACTTAACGCCTTGGCGCCGG
CATTCGTTCCGCGGTCGATTTCTCCTACGCCATCTTTGAACGATTTGAATCAGGCTGATT
TTCATCCGCTTCCGAACCATTATGTATATGCTCCTCAGTTGCAGGTTCAGTATCCATCAC
CGTATTATGGCGGTGGTGGTGGTGGTGTAGCTGATGTAGATCATGCTAGTGCTAGTAAAC
GTGGAGGGTTAACTGATGAAGCTGCGCAAAAGATTGTTAATCAAGTGGAGTTCTATTTCA
GTGATTTAAATTTGGCAACAACTGATCATTTAATAAAGCATATGCTCAAGGATCAGGAAG
GTTATGTACCAATATCTGTAGTTGCGTTGTTCAAGAAGATTAAAGCTCTTATACGTAATC
ATGCACAGCTTGCTCAAGTTCTGCGGAGCTCTACAAAGCTGGTTGTTAGTGAGGATGGAA
TGAAGGTTAAACGCAAAATTCCTTTGGCCGAAACCGACTTAAAAGAACTGCAATCTCGAA
TTGTGATTGCTGAAAATTTGCCTGAGGATCATTGCCATCAGAATCTCATGAAGATTTTCT
CAGCAGTTGGAAGCGTTAAAATGATACGCACCTGCTTACCTCAGTCTTCCAATGGTGGGG
CATCTTCAGGATCTAGAACAGCAAAGTCAGATAGTACTCTTCACAGCAACAAGTTACACG
CATTTGTGGAATACGAAACCGCCGAATTGGCTGAGAGGGCGGCTGTAGAGTTAAATGATG
ATAACTGGAGAAATGCTCTGGAAGTCCGATTACTTCTTAGAAGCTCAGAAAAATCTGGTC
AAGCTCAAGGGAAAAAAGCTGGTCATGATAGTGAAAACTTCAAGGGGGATGATGGTTCTG
CATTAGAGGTCAACGAGAAGCTTAATGAAGAGTCACGCCACCATATTGATGCTAAATCCA
ATGAGCTTGCAGAGGAGCATGGCAGTGATGGGCAGAGGCGTGGGCGTGGTCAGGGTCGGG
GTCGGGGTAAGGGACAGGGTCAGAGACGTGGACGTCCGCAGTCTCATCAAAACAATCGTG
GAGGTCATTTAGGAGCTCCCTTATCAAACGTGAATCGTGGAAGTAATGTGCGAAATTCCC
TCTCAAATATCATCCGTGTTGGTGTAGGGAAGCCTGTTCTTGAGCAGTCAGCAGCAGCCA
AGCAATCTTCTGTACCTCGTATGCCAGATGGTACTAAGGGATTCTCCATGGGCCGAGGCA
AATCGACGCCTATTATAACTATGTGATAACTTCCTACTTCACTGAAATTGGTGTGA