Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g014510.3.1
CDS Infomation

Zinc finger protein (AHRD V3.3 *** W9RXF5_9ROSA)
Sequence

ATGTTGAAGATGATATTCGCATCATCAAACAAAATTATTCAAAACTCTTCCATTTCGATT
TCCATATCCATATCCAATTTCCATACCAAAAACTCAGCAATCCAGTTCGTTCTTGAAGAA
GGTAAAACGCTTCAATCTCAACAAACCACTAAGCAGAACGAAGAAGTTGAGTTTAGCAGA
AAACCTAATTCTGGAATTCAGACTCCTCAACTTTGGCCTGAATGGGTGAACTTGATGGAC
AAGTTGTTAAAAATGGGATGTTTTGATGGATTCGGAAACCCTTTTGGAAATGCTCAATGG
GATGCAAACCTAATTAGAACTGCTTGTTTGAATTTTGCTCGACACCGATTTGATCTCATA
AGATATTTGTCCCCGCAAGATATTGAGGTGCTTGCAAGTTGTGGCTGTCCAAGCATGGAT
AGAAAAGTTGTCAACTCTGGAAAGCGTCTTAGACTATTGTTCGGCATCGAGGAAGGAAAT
GTCTGCAGCTTCTGCATATTGAGGGGAAGTTGTGAGAGGGCTTATGCCGTACCACATAAA
GATCAAGGTGGTCGAACTGTTGATGTTATGCGTCTACTATTGACTTATGGACTCAATCCA
ATTACTGGTGCTGTGGAGAATAAACCATCCTTGAACAAAAGAGTTGAAGAATCAGCAAGA
AAGCTGTTGAAAGAAATTGTGAATTTCAGTTCTGAGGAACTCTTTTGTGAAACAAAGAAA
TCCACAAACCCTTGGAATCCATCTGTACAACGTGATCATGAAGAAGGTCAGATCAATGCT
CTCAGGAAACATGGTGATTGGGTTTGTCCCGAATGCAACTTCTTAAATTTTTCTAGAAAT
GCTAAGTGCTTACGGTGCAATGGCTTGAATCACGAAAGACTTAACAAGTTAAGACAGGAG
CAGGATCATCTTCCATTAAAGAAAGGCGACTGGATTTGCTCCAAATGCCATTTTATGAAC
TTCGCAAAGAATACAAGGTGCTTGCAGTGTACAGAAAAGCCACCTAAACGGCACCTTAAT
CCTGGAGAGTGGGAGTGTGAATCGTGCAACTACATCAATTTCAAAAGAAACACAGTGTGC
TTGAAATGTGATCACAGACGACCAAAAGCATCTAGCTGTGCAGGTTCTTCCTGTGGATCT
GCAAATCAAAGTAGAACCATTAGTCGAACACGGCCTTATTTTGGTGAACTGAATGAAGAA
ACAGATGAGGAATGGCAATTGATTGAGAGTGAGCGTGAAGATCGTTTGAGCTCAATGCCA
GAGAATGAGGTTGTTGATTTTCCTGTTTTAGGGGGGAATAGTGAATTGTCTCGAGATGCA
AAGAAGCAAGAAAGGTGGAAGACTGGAAATAAAAGAGAAAATGGTGATGAATTGAATAAG
AAGTATTTTCAAAATAGTGGCAATGAGGAAATGGATGAGTGGTTTGGGCATAAAAATGTG
TGA

Peptide Sequence

PEP ID

Solyc08g014510.3.1
PEP Infomation

Zinc finger protein (AHRD V3.3 *** W9RXF5_9ROSA)
Sequence

MLKMIFASSNKIIQNSSISISISISNFHTKNSAIQFVLEEGKTLQSQQTTKQNEEVEFSR
KPNSGIQTPQLWPEWVNLMDKLLKMGCFDGFGNPFGNAQWDANLIRTACLNFARHRFDLI
RYLSPQDIEVLASCGCPSMDRKVVNSGKRLRLLFGIEEGNVCSFCILRGSCERAYAVPHK
DQGGRTVDVMRLLLTYGLNPITGAVENKPSLNKRVEESARKLLKEIVNFSSEELFCETKK
STNPWNPSVQRDHEEGQINALRKHGDWVCPECNFLNFSRNAKCLRCNGLNHERLNKLRQE
QDHLPLKKGDWICSKCHFMNFAKNTRCLQCTEKPPKRHLNPGEWECESCNYINFKRNTVC
LKCDHRRPKASSCAGSSCGSANQSRTISRTRPYFGELNEETDEEWQLIESEREDRLSSMP
ENEVVDFPVLGGNSELSRDAKKQERWKTGNKRENGDELNKKYFQNSGNEEMDEWFGHKNV
*

Transcript Sequence

Transcript ID

Solyc08g014510.3.1
Transcript Infomation

Zinc finger protein (AHRD V3.3 *** W9RXF5_9ROSA)
Sequence

GTTACCTTGAAAAATTGTTTTGTATGGTATTAATCCCTTAAATCCCAAACCTCTTCTAAG
CAAATAAAATGTTGAAGATGATATTCGCATCATCAAACAAAATTATTCAAAACTCTTCCA
TTTCGATTTCCATATCCATATCCAATTTCCATACCAAAAACTCAGCAATCCAGTTCGTTC
TTGAAGAAGGTAAAACGCTTCAATCTCAACAAACCACTAAGCAGAACGAAGAAGTTGAGT
TTAGCAGAAAACCTAATTCTGGAATTCAGACTCCTCAACTTTGGCCTGAATGGGTGAACT
TGATGGACAAGTTGTTAAAAATGGGATGTTTTGATGGATTCGGAAACCCTTTTGGAAATG
CTCAATGGGATGCAAACCTAATTAGAACTGCTTGTTTGAATTTTGCTCGACACCGATTTG
ATCTCATAAGATATTTGTCCCCGCAAGATATTGAGGTGCTTGCAAGTTGTGGCTGTCCAA
GCATGGATAGAAAAGTTGTCAACTCTGGAAAGCGTCTTAGACTATTGTTCGGCATCGAGG
AAGGAAATGTCTGCAGCTTCTGCATATTGAGGGGAAGTTGTGAGAGGGCTTATGCCGTAC
CACATAAAGATCAAGGTGGTCGAACTGTTGATGTTATGCGTCTACTATTGACTTATGGAC
TCAATCCAATTACTGGTGCTGTGGAGAATAAACCATCCTTGAACAAAAGAGTTGAAGAAT
CAGCAAGAAAGCTGTTGAAAGAAATTGTGAATTTCAGTTCTGAGGAACTCTTTTGTGAAA
CAAAGAAATCCACAAACCCTTGGAATCCATCTGTACAACGTGATCATGAAGAAGGTCAGA
TCAATGCTCTCAGGAAACATGGTGATTGGGTTTGTCCCGAATGCAACTTCTTAAATTTTT
CTAGAAATGCTAAGTGCTTACGGTGCAATGGCTTGAATCACGAAAGACTTAACAAGTTAA
GACAGGAGCAGGATCATCTTCCATTAAAGAAAGGCGACTGGATTTGCTCCAAATGCCATT
TTATGAACTTCGCAAAGAATACAAGGTGCTTGCAGTGTACAGAAAAGCCACCTAAACGGC
ACCTTAATCCTGGAGAGTGGGAGTGTGAATCGTGCAACTACATCAATTTCAAAAGAAACA
CAGTGTGCTTGAAATGTGATCACAGACGACCAAAAGCATCTAGCTGTGCAGGTTCTTCCT
GTGGATCTGCAAATCAAAGTAGAACCATTAGTCGAACACGGCCTTATTTTGGTGAACTGA
ATGAAGAAACAGATGAGGAATGGCAATTGATTGAGAGTGAGCGTGAAGATCGTTTGAGCT
CAATGCCAGAGAATGAGGTTGTTGATTTTCCTGTTTTAGGGGGGAATAGTGAATTGTCTC
GAGATGCAAAGAAGCAAGAAAGGTGGAAGACTGGAAATAAAAGAGAAAATGGTGATGAAT
TGAATAAGAAGTATTTTCAAAATAGTGGCAATGAGGAAATGGATGAGTGGTTTGGGCATA
AAAATGTGTGAAACAGTGGAAACTTTAAAGAAGTTAGTGAAGGGACTCGCCCTATCTTCC
TGTTTTCGAAGCTGTTCTGAATTTTGCACTACAAGAATTGCAATTCAAAAGGAGAACTGT
GATCCCAGACGCCTCAACTTACTTTTTGTTCTATGTAATGATCTGTAGGATCCAGATGGA
CTCATGGTCCTCTATCATTGTACAAATGTTTGATCAATAGAATTCATCTTTTCTGACCCC
AACAAAAACACTTTAAGGAAGATACTATGAAAGTTTTGTGTTGTGGCAAGATATTTCATC
TTCTAAAAGCAGGCAACGTATGCCACTAACAAAAAAAAAAAAAAAGTTATATTGAGGAGG
TTTTATTGTGGAAATTAACACAACCCCCTAAATTGCATCAAATTGCAGAGACTTCAACAA
TCCCTTCAATTTTTGTGCAATTTGTGGAGATCAACCACCATAACACACAAAATAAAAATT
ATTCTCTTCCAAATTGGTCGCTTCATTTCCCTAAACCCTTG