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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g014310.3.1
CDS Infomation

spermidine synthase (AHRD V3.3 *** AT1G23820.1)
Sequence

ATGGAAGTCATATATACTCACACAAATAGCTCTGCCATCACAATCACCACCAACGGCCAC
CACAATAATAGCAAGCCCGATAATCGAAACAGTAGAACAAATCATGAGAATGGCAATAAG
CTATTATTGGGAAACTCCAACTCTATTAAGCCTGGTTGGTTTTCAGAGTTTAGTGCGTTA
TGGCCAGGTGAAGCATTCTCTATAAAAATTGAGAAGTTGTTATTTCAAGGGAAGTCTGAT
TATCAAGATGTCATGCTCTTTGAGTCAGCAACTTATGGTAAGGTTCTTACATTGGATGGA
GCAATTCAACACACAGAAAATGGTGGATTTCCATATACTGAAATGATTGTTCATCTACCA
CTTGGTTCAATCCCAAGTCCCAAAAAGGTATTGATCATTGGTGGAGGAATTGGTTTTACA
TTATTCGAAGTTCTTCGTTATCCTACCATTGAAAAAATTGATATTGTTGAAATTGATAAC
GTGGTGGTTGATGTGTCTAGAAAAATTTTCCCCTACCTTGCGGCTAATTTTAATGATCCT
CGAGTAACTCTCGTTCTTGGCGATGGAGCTGCATTTGTAAAGGCTGCACAAGCAGGGTAT
TATGATGCTATTATAGTGGACTCTTCTGATCCTATTGGTCCAGCAAAAGATTTATTTGAG
AGGCCATTTTTTGAGTCAGTAGCCAAAGCTCTTAGACCAGGAGGAGTTGTATGCACACAA
GCTGAAAGTATTTGGCTTCATATGCATATTATTGAACAAATTATTGCTAATTGTCGACAA
GTCTTTAAAGGTTCTGTCAACTATGCTTGGACTACTGTTCCAACATATCCAACTGGTGTT
ATTGGTTACATGCTTTGCTCTACTGAGGGACCAGAAGTTGACTTTAAGAATCCAGTGAAT
TCAATCGACAAAGATACAACTCATGTCAAGTCAAAATTACAACCTCTCAAGTTCTACAAC
ACTGATATTCATAAAGCAGCTTTTGTTTTGCCATCTTTTGCCAGAAGTTTGATTGAGTCT
TAG

Peptide Sequence

PEP ID

Solyc08g014310.3.1
PEP Infomation

spermidine synthase (AHRD V3.3 *** AT1G23820.1)
Sequence

MEVIYTHTNSSAITITTNGHHNNSKPDNRNSRTNHENGNKLLLGNSNSIKPGWFSEFSAL
WPGEAFSIKIEKLLFQGKSDYQDVMLFESATYGKVLTLDGAIQHTENGGFPYTEMIVHLP
LGSIPSPKKVLIIGGGIGFTLFEVLRYPTIEKIDIVEIDNVVVDVSRKIFPYLAANFNDP
RVTLVLGDGAAFVKAAQAGYYDAIIVDSSDPIGPAKDLFERPFFESVAKALRPGGVVCTQ
AESIWLHMHIIEQIIANCRQVFKGSVNYAWTTVPTYPTGVIGYMLCSTEGPEVDFKNPVN
SIDKDTTHVKSKLQPLKFYNTDIHKAAFVLPSFARSLIES*

Transcript Sequence

Transcript ID

Solyc08g014310.3.1
Transcript Infomation

spermidine synthase (AHRD V3.3 *** AT1G23820.1)
Sequence

ATGGAAGTCATATATACTCACACAAATAGCTCTGCCATCACAATCACCACCAACGGCCAC
CACAATAATAGCAAGCCCGATAATCGAAACAGTAGAACAAATCATGAGAATGGCAATAAG
CTATTATTGGGAAACTCCAACTCTATTAAGCCTGGTTGGTTTTCAGAGTTTAGTGCGTTA
TGGCCAGGTGAAGCATTCTCTATAAAAATTGAGAAGTTGTTATTTCAAGGGAAGTCTGAT
TATCAAGATGTCATGCTCTTTGAGTCAGCAACTTATGGTAAGGTTCTTACATTGGATGGA
GCAATTCAACACACAGAAAATGGTGGATTTCCATATACTGAAATGATTGTTCATCTACCA
CTTGGTTCAATCCCAAGTCCCAAAAAGGTATTGATCATTGGTGGAGGAATTGGTTTTACA
TTATTCGAAGTTCTTCGTTATCCTACCATTGAAAAAATTGATATTGTTGAAATTGATAAC
GTGGTGGTTGATGTGTCTAGAAAAATTTTCCCCTACCTTGCGGCTAATTTTAATGATCCT
CGAGTAACTCTCGTTCTTGGCGATGGAGCTGCATTTGTAAAGGCTGCACAAGCAGGGTAT
TATGATGCTATTATAGTGGACTCTTCTGATCCTATTGGTCCAGCAAAAGATTTATTTGAG
AGGCCATTTTTTGAGTCAGTAGCCAAAGCTCTTAGACCAGGAGGAGTTGTATGCACACAA
GCTGAAAGTATTTGGCTTCATATGCATATTATTGAACAAATTATTGCTAATTGTCGACAA
GTCTTTAAAGGTTCTGTCAACTATGCTTGGACTACTGTTCCAACATATCCAACTGGTGTT
ATTGGTTACATGCTTTGCTCTACTGAGGGACCAGAAGTTGACTTTAAGAATCCAGTGAAT
TCAATCGACAAAGATACAACTCATGTCAAGTCAAAATTACAACCTCTCAAGTTCTACAAC
ACTGATATTCATAAAGCAGCTTTTGTTTTGCCATCTTTTGCCAGAAGTTTGATTGAGTCT
TAG