Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g013860.3.1
CDS Infomation

Malic enzyme (AHRD V3.3 *** K4CJ21_SOLLC)
Sequence

ATGGCGAATTTTTCCAATCAAATGCGACTTTCCTCAACTATTCTGAGGCGTTTACATCAA
AGAGTTGCTGCTGCTGTGAATTCATCTTCTTCAAGAAATTTTACTACAACGGAAGGTCAT
CGTCCTACTATTGTTCATAAGCGTAGTCTTGATATTCTTCACGATCCATGGTTTAACAAG
GGAACAGCATTCTCATTTACAGAACGTGATCGTCTTCACATTCGTGGCCTACTGCCTCCA
AACGTGATGTCTTTTGAACAACAAATTGCACGGTTCATGGCTGACTTGAAGCGGCTTGAA
GTACAAGCTAGAGATGGTCCATCTGACCCATATGTTTTGGCCAAGTGGCGCATACTTAAT
CGCTTGCACGATAGAAATGAGACTTTGTACTACAAGGTTCTAATGGAAAATATTGAGGAA
TATGCACCCATAGTGTATACTCCTACAGTTGGTCTTGTTTGCCAGAAGTACAGTGGATTG
TTCAGACGTCCGAGGGGCATGTACTTCAGTGCCGAAGATCGTGGGGAAATGATGTCAATG
GTTTACAACTGGCCAGCTGATCAGGTTGACATGATTGTTGTAACTGATGGAAGTAGAATA
TTGGGTCTTGGAGATCTCGGAGTTCAGGGAATTGGTATTGCAATTGGGAAGCTGGATTTG
TATGTGGCTGCTGCTGGGATCAACCCTCAAAGAGTATTGCCTGTAATGATTGATGTTGGA
ACTGACAACGAGAATCTCTTGAAAGACCCTTTATATTTGGGACTGCAAGAGCATCGGCTT
GACGGAGAGAAGTATATTGAAGTAATTGATGAATTTATGGAGGCTGTTTTTACTCGTTGG
CCCCATGTGATTGTGCAGTTTGAAGATTTTCAAAGCAAGTGGGCCTTTAAGCTGTTGCAG
CGTTATAGAAACAACTACAGAATGTTTAATGATGATGTCCAGGGAACTGCAGGAGTTGCT
ATTGCTGGTCTTCTGGGAGCAGTAAGAGCACAGGGAAGGCCAATGATTGATTTTCCAAAA
ATGAAGATTGTGGTGGCGGGTGCTGGAAGTGCAGGAATAGGGGTTCTTAATGCTGCTAGG
AAGACAATGGCAAGAATGTTAGGGAATACTGAAGTTGCTTTTGAAAGTGCAAGAAGTCAG
TTCTGGGTGGTTGATGCCAAGGGATTAATTACTGAGGCACGTGAAAATGTTGATCCTGAT
GCTCGCCCGTTTGCCAGAAAGATCAAAGAGATTGAACGTCAAGGTCTAAGTGAAGGCGCA
ACTCTTGCGGAAGTGGTACGCGAAGTGAAGCCAGATGTACTTCTTGGTTTATCTGCTTGT
GGAGGCTTGTTTTCAAAAGAGGTACTGGAAGCCCTTAAGCATTCAACTTCAACCCGGCCT
GCAATTTTTCCAATGTCAAACCCAACGAGAAATGCTGAATGCACCCCTGAGGAAGCATTT
TCTGTTCTCGGGGAGAACATTATATTTGCAAGTGGAAGCCCATTCAAGGATGTGGATCTT
GGAAATGGTCATGTTGGACACTGCAACCAAGCAAACAACATGTTCCTTTTTCCTGGAATA
GGACTTGGTACTCTTCTGTCTGGATCTAGAATCGTTTCAGATGGCATGTTACAGGCTGCA
GCTGAGTGTTTGGCTGCATATATGACAGAGGAGGAGGTACTCAAGGGTATTATATACCCT
TCGATATCCAGGATACGCGATATAACAAAGGAGGTAGCTGCAGCTGTGGTGAAAGAAGCT
ATAGAAGAGGATCTTGCTGAAGGATACCGTGAAATGGACAGCCGAGAGTTACGGAAACTT
GATGAGGCACAAATATCTGAGTTCGTGGAGAACAATATGTGGAGTCCGGATTATCCAACA
CTGGTTTACAAGAAAGATTGA

Peptide Sequence

PEP ID

Solyc08g013860.3.1
PEP Infomation

Malic enzyme (AHRD V3.3 *** K4CJ21_SOLLC)
Sequence

MANFSNQMRLSSTILRRLHQRVAAAVNSSSSRNFTTTEGHRPTIVHKRSLDILHDPWFNK
GTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILN
RLHDRNETLYYKVLMENIEEYAPIVYTPTVGLVCQKYSGLFRRPRGMYFSAEDRGEMMSM
VYNWPADQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVG
TDNENLLKDPLYLGLQEHRLDGEKYIEVIDEFMEAVFTRWPHVIVQFEDFQSKWAFKLLQ
RYRNNYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAGIGVLNAAR
KTMARMLGNTEVAFESARSQFWVVDAKGLITEARENVDPDARPFARKIKEIERQGLSEGA
TLAEVVREVKPDVLLGLSACGGLFSKEVLEALKHSTSTRPAIFPMSNPTRNAECTPEEAF
SVLGENIIFASGSPFKDVDLGNGHVGHCNQANNMFLFPGIGLGTLLSGSRIVSDGMLQAA
AECLAAYMTEEEVLKGIIYPSISRIRDITKEVAAAVVKEAIEEDLAEGYREMDSRELRKL
DEAQISEFVENNMWSPDYPTLVYKKD*

Transcript Sequence

Transcript ID

Solyc08g013860.3.1
Transcript Infomation

Malic enzyme (AHRD V3.3 *** K4CJ21_SOLLC)
Sequence

AGATAAGGAGGCAAAAACAGAATAAAAATTAAGAAAAAGAATGAGAAGGTGGAGCACAAA
GCATAAGAACGACAACGACAACTATCTATATTTTTTGTAATTAAATTGAACGAAAGTCCT
TCTTGTGTAATTATATTTTTATATAATAATTCATTTGGACGGTCCATCCATCTATGGATT
AAGAGATGTGATAAGCTCAACTTGATATCTATAATCTATTGCACGAATTACCAAAATTAT
CTATGAATTGTGTTTTTCGATTTAACTAATAGAAATAGTCACCATGCCATGAATGGATAT
TTAACTAAATGCAAAATGATAACTCCGCTCCTTTTGTAGGTCAAAGCAAGCTCTATATTT
GTCATAACTGTCTCGAGATAGAAAAGGTCATCTTAGACTTACAAATCAAAAAAGAAAATG
TAGGAATTCAAATAAAAAAAAAGAAGATAATAGACTAGGAGAAGTTCAAATAGTATCAAA
AATTTATTTGCCTTCAACATTTCGCTCAACTAAAATCCTTCCTAGTAAGAATGATATTTG
AAAGGTTCAAAATTTTCTAAACTCCCCTCTCCAACTCGAGCGTTGAACAGAAAATCCCAA
AAATAATTAATGTAAATAAATATATTAATACATAATAAAAAGGCATATACAATCTCTTTT
GAAATTTATTATCATAATTTTATGTTTCGACAAGAATCATAACACGAGACATCTAATTAA
GACTTTACGACGGTGAACATATAATTGTGTCATAAATGAGCCGGGTCTAAACACGCTCGA
TTTTTACATTCTTTTGTCAATGGAATTCAGCCGACAAAATTAGTCACAAAAATGCAAGGA
ATTAACCAATTACCACTCGTTTAAGCTTTTCCGGCCACTGAACACTGTGAAAACTCTACA
TCGAATATCGTGATTATTTATTTATTGGGTTTATTAACAAGTTTCACTTTCGCTTGATCT
TCATTCTTCACTGTTTCTCTTCGATCCAGAAAAATGGCGAATTTTTCCAATCAAATGCGA
CTTTCCTCAACTATTCTGAGGCGTTTACATCAAAGAGTTGCTGCTGCTGTGAATTCATCT
TCTTCAAGAAATTTTACTACAACGGAAGGTCATCGTCCTACTATTGTTCATAAGCGTAGT
CTTGATATTCTTCACGATCCATGGTTTAACAAGGGAACAGCATTCTCATTTACAGAACGT
GATCGTCTTCACATTCGTGGCCTACTGCCTCCAAACGTGATGTCTTTTGAACAACAAATT
GCACGGTTCATGGCTGACTTGAAGCGGCTTGAAGTACAAGCTAGAGATGGTCCATCTGAC
CCATATGTTTTGGCCAAGTGGCGCATACTTAATCGCTTGCACGATAGAAATGAGACTTTG
TACTACAAGGTTCTAATGGAAAATATTGAGGAATATGCACCCATAGTGTATACTCCTACA
GTTGGTCTTGTTTGCCAGAAGTACAGTGGATTGTTCAGACGTCCGAGGGGCATGTACTTC
AGTGCCGAAGATCGTGGGGAAATGATGTCAATGGTTTACAACTGGCCAGCTGATCAGGTT
GACATGATTGTTGTAACTGATGGAAGTAGAATATTGGGTCTTGGAGATCTCGGAGTTCAG
GGAATTGGTATTGCAATTGGGAAGCTGGATTTGTATGTGGCTGCTGCTGGGATCAACCCT
CAAAGAGTATTGCCTGTAATGATTGATGTTGGAACTGACAACGAGAATCTCTTGAAAGAC
CCTTTATATTTGGGACTGCAAGAGCATCGGCTTGACGGAGAGAAGTATATTGAAGTAATT
GATGAATTTATGGAGGCTGTTTTTACTCGTTGGCCCCATGTGATTGTGCAGTTTGAAGAT
TTTCAAAGCAAGTGGGCCTTTAAGCTGTTGCAGCGTTATAGAAACAACTACAGAATGTTT
AATGATGATGTCCAGGGAACTGCAGGAGTTGCTATTGCTGGTCTTCTGGGAGCAGTAAGA
GCACAGGGAAGGCCAATGATTGATTTTCCAAAAATGAAGATTGTGGTGGCGGGTGCTGGA
AGTGCAGGAATAGGGGTTCTTAATGCTGCTAGGAAGACAATGGCAAGAATGTTAGGGAAT
ACTGAAGTTGCTTTTGAAAGTGCAAGAAGTCAGTTCTGGGTGGTTGATGCCAAGGGATTA
ATTACTGAGGCACGTGAAAATGTTGATCCTGATGCTCGCCCGTTTGCCAGAAAGATCAAA
GAGATTGAACGTCAAGGTCTAAGTGAAGGCGCAACTCTTGCGGAAGTGGTACGCGAAGTG
AAGCCAGATGTACTTCTTGGTTTATCTGCTTGTGGAGGCTTGTTTTCAAAAGAGGTACTG
GAAGCCCTTAAGCATTCAACTTCAACCCGGCCTGCAATTTTTCCAATGTCAAACCCAACG
AGAAATGCTGAATGCACCCCTGAGGAAGCATTTTCTGTTCTCGGGGAGAACATTATATTT
GCAAGTGGAAGCCCATTCAAGGATGTGGATCTTGGAAATGGTCATGTTGGACACTGCAAC
CAAGCAAACAACATGTTCCTTTTTCCTGGAATAGGACTTGGTACTCTTCTGTCTGGATCT
AGAATCGTTTCAGATGGCATGTTACAGGCTGCAGCTGAGTGTTTGGCTGCATATATGACA
GAGGAGGAGGTACTCAAGGGTATTATATACCCTTCGATATCCAGGATACGCGATATAACA
AAGGAGGTAGCTGCAGCTGTGGTGAAAGAAGCTATAGAAGAGGATCTTGCTGAAGGATAC
CGTGAAATGGACAGCCGAGAGTTACGGAAACTTGATGAGGCACAAATATCTGAGTTCGTG
GAGAACAATATGTGGAGTCCGGATTATCCAACACTGGTTTACAAGAAAGATTGATCATCT
ATGGATGCTTGCAAAGCTTCATTTTTTCATGTTTCTCGCAACATCAGGAAGGGCGTGATG
GATCAAATACGATAATGGACATTTTGTGACATGATGCATGGGATCATGTTAAATTTAACA
TCCAGTAATATCCCATTCATCAACATTTGATTGACTGATGACTTCTTGATATTATAGCTT
TTATTGAGTAGTCCATAAGTTGGTTGTCTGTAAAAGTGAATAAACTTCCAGTTCTGACTT
CGAGCTTCGTCAACGCAGACGATGTAGTCTTATGGGCTGTTGCTGCACAAATGTACTATA
AATTGCCCTGTGATGTAGTTGTTGTGTAGAAGTGTTTGTGAAGTTCTGATAGTTCTCTGT
ACTCTATTTGACTTGTACAATAAAGGGATCACTAGTATTCACACTGTTTCCTCAAAAATA
TTACTACTAAACAAAATGGGATAAACTTTAGTACATAAATGGAGGTAGAATTTTTCGATT
CAAATTTGAGCTCCAGTGCTCTCTTTAGTTATA