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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g013830.1.1
CDS Infomation

LOW QUALITY:Transferase family protein (AHRD V3.3 *** U5G7I4_POPTR)
Sequence

ATGACTCCCATGGTACAAGAACTTAATTTTCCTCAACTTCAAATACCTCTAACCATCAAT
TCAATTTCTCCAATCTTACCATCAAGTCCCATCCCTCCATCCTATGGTGACACCCTTTAC
CTATCAAATCTTGATGATATGATTGGATCTCGCGTTTTCACTCCAACCATGTATTTCTAT
CGATCCAATGGAAAAATGGATGTGATGACGATCATCAATGTGTTGAAAGAAGCTCTTGCA
AGTGTATTGGTACCATACTATCCTTTCTCAGGTAGGCTACGCGAAACAAAAGAGGGAAAG
TTAGAAGTATTTTTTGGGCCTAAACAAGGTGTGCTTCTAGTTGAGGCTTGTTCAGAGATG
AAGATACTAAATCTTGGTGATTTAACAGTCCCAAATCCTGCATGGAAAAACTTGGTTTAC
ACATTTCCAAATGAAGAACAATATAAAGTGATTGATATGCCATTGCTAATAGCACAAGTA
ACGCGTTTTAGCTGTGGTGGATTTAGCCTTGGTTTGAGGGTTTGTCATTGTCTTTGTGAT
GGGGTTGGAGCAATGCAATTCCTAAGTGCTTGGGCTTCAACCGCGAGGTTGAACAAATTG
ACACTCGATCCCAAACCATGTTGGGATCGAGAGACACTTATCCCTAATGATCCGCCATTC
ATTCAATACCCACACATTGAATTCAAAAGAATAGATGATGCATTTAGTTTCACGAGGAGA
CTTTTTGTTCAAAAATGTTATCGTGTTACTCGAGACTTCCAAGCTCATTTGAAGACCTTA
GTTGGTCCTAACATCTCATGTACCACCTTTGATGCAATGGCGGCTCATGTGTGGAGGTCA
TGGGTCAAGGCACTCATCAATGTTAGCCCTCTCGATTACGAGTTAAGGCTAACATTTTCA
GTAAATTGTAGATCTAGACTTACAAATCCACCACTCAAATCAGGTTTCTATGGGAATGCA
GTATCTGTGGCATGTGCTACTAGCACTGTCTCGGGAATTGTTAATGGATCTATCTCTGAT
ACCATATGTCTGGTACGAAATGCAAGGCTTTCTGTCTCCAAGGCATATTTGAGGTCAACT
ATTGATTATATCCAAGTTAATAGGCCTACAAAGCTAGAATTTGGTGGTAAACTTACTATA
ACTCAATGGACTAGATTTTCAATGTATGAATCTGCTGATTTTGGTTGGGGAAAGCCCATT
TATGCTGGCCCAATTGATCTCACACCAACACCACAAGTTTGTGTTTTTTTGCCACAAGAT
AATTCTGATGGAGCTATGCTTGTTTGCATTTGTTTGCCAGAGGATGTTTCACATAGATTT
ACTGACATTTTCTGCCTATTAAACTAA

Peptide Sequence

PEP ID

Solyc08g013830.1.1
PEP Infomation

LOW QUALITY:Transferase family protein (AHRD V3.3 *** U5G7I4_POPTR)
Sequence

MTPMVQELNFPQLQIPLTINSISPILPSSPIPPSYGDTLYLSNLDDMIGSRVFTPTMYFY
RSNGKMDVMTIINVLKEALASVLVPYYPFSGRLRETKEGKLEVFFGPKQGVLLVEACSEM
KILNLGDLTVPNPAWKNLVYTFPNEEQYKVIDMPLLIAQVTRFSCGGFSLGLRVCHCLCD
GVGAMQFLSAWASTARLNKLTLDPKPCWDRETLIPNDPPFIQYPHIEFKRIDDAFSFTRR
LFVQKCYRVTRDFQAHLKTLVGPNISCTTFDAMAAHVWRSWVKALINVSPLDYELRLTFS
VNCRSRLTNPPLKSGFYGNAVSVACATSTVSGIVNGSISDTICLVRNARLSVSKAYLRST
IDYIQVNRPTKLEFGGKLTITQWTRFSMYESADFGWGKPIYAGPIDLTPTPQVCVFLPQD
NSDGAMLVCICLPEDVSHRFTDIFCLLN*

Transcript Sequence

Transcript ID

Solyc08g013830.1.1
Transcript Infomation

LOW QUALITY:Transferase family protein (AHRD V3.3 *** U5G7I4_POPTR)
Sequence

ATGACTCCCATGGTACAAGAACTTAATTTTCCTCAACTTCAAATACCTCTAACCATCAAT
TCAATTTCTCCAATCTTACCATCAAGTCCCATCCCTCCATCCTATGGTGACACCCTTTAC
CTATCAAATCTTGATGATATGATTGGATCTCGCGTTTTCACTCCAACCATGTATTTCTAT
CGATCCAATGGAAAAATGGATGTGATGACGATCATCAATGTGTTGAAAGAAGCTCTTGCA
AGTGTATTGGTACCATACTATCCTTTCTCAGGTAGGCTACGCGAAACAAAAGAGGGAAAG
TTAGAAGTATTTTTTGGGCCTAAACAAGGTGTGCTTCTAGTTGAGGCTTGTTCAGAGATG
AAGATACTAAATCTTGGTGATTTAACAGTCCCAAATCCTGCATGGAAAAACTTGGTTTAC
ACATTTCCAAATGAAGAACAATATAAAGTGATTGATATGCCATTGCTAATAGCACAAGTA
ACGCGTTTTAGCTGTGGTGGATTTAGCCTTGGTTTGAGGGTTTGTCATTGTCTTTGTGAT
GGGGTTGGAGCAATGCAATTCCTAAGTGCTTGGGCTTCAACCGCGAGGTTGAACAAATTG
ACACTCGATCCCAAACCATGTTGGGATCGAGAGACACTTATCCCTAATGATCCGCCATTC
ATTCAATACCCACACATTGAATTCAAAAGAATAGATGATGCATTTAGTTTCACGAGGAGA
CTTTTTGTTCAAAAATGTTATCGTGTTACTCGAGACTTCCAAGCTCATTTGAAGACCTTA
GTTGGTCCTAACATCTCATGTACCACCTTTGATGCAATGGCGGCTCATGTGTGGAGGTCA
TGGGTCAAGGCACTCATCAATGTTAGCCCTCTCGATTACGAGTTAAGGCTAACATTTTCA
GTAAATTGTAGATCTAGACTTACAAATCCACCACTCAAATCAGGTTTCTATGGGAATGCA
GTATCTGTGGCATGTGCTACTAGCACTGTCTCGGGAATTGTTAATGGATCTATCTCTGAT
ACCATATGTCTGGTACGAAATGCAAGGCTTTCTGTCTCCAAGGCATATTTGAGGTCAACT
ATTGATTATATCCAAGTTAATAGGCCTACAAAGCTAGAATTTGGTGGTAAACTTACTATA
ACTCAATGGACTAGATTTTCAATGTATGAATCTGCTGATTTTGGTTGGGGAAAGCCCATT
TATGCTGGCCCAATTGATCTCACACCAACACCACAAGTTTGTGTTTTTTTGCCACAAGAT
AATTCTGATGGAGCTATGCTTGTTTGCATTTGTTTGCCAGAGGATGTTTCACATAGATTT
ACTGACATTTTCTGCCTATTAAACTAA