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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g013710.3.1
CDS Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* AT2G37950.1)
Sequence

ATGCAAGATGTCGGTGTAGTCCGGCATGATAGTACCGTTCACTGTGATGATCCTTCTGAT
ATTGAAAAGCAGAGTGGGGAGATCAGCAATCATGACTTAGCTACTGAAAGAGTGGATCAA
TCTGTACTCACCATAGTGGTTCCTGCAAGCGAATCAATCAACTCCCAGGATCCAACATTA
ATCACAGACCCAGTTGGGAACATTTCCACCATTGTAGAGTCTCCTAAGAAGCCTTACTTA
TCCAGGAATCATAGCTTTCAGGAACAATGCAGAGTATGTCAAGAGGAAAAAGAGGAAGAA
TTGATCGATCTTGGATGCCACTGTCGTGGTGGATTGGCAAAAGCACATCGGACATGCATA
GATACATGGTTTAGTACTAGAGGTTCAAATAAATGTGAAATATGCCAGCAAGTAGCTGTA
AATGTGGCATCTCCAGAGGCTCATGCACCTGGTTGTCTTAATCCACTTTGGGTTGCGTTT
TGTATCCTCATTGGCGGTCTGTTTCTGGATGTGTTAATATCAATTACGCTTGGAGTCTCT
GCACTGCCTGTGAACATCATAATCGGGGTAATAGTTGTGCTGGGACTCGGAACAGCTCTT
CGGCTTGCCCTTGAGTTCTGCCATGATCGGAGTATCAGAAGTGTAGTTCACCGGTTAGAA
GGAAACGTCAGTCTTGGATATCATCCTACGGTATAA

Peptide Sequence

PEP ID

Solyc08g013710.3.1
PEP Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* AT2G37950.1)
Sequence

MQDVGVVRHDSTVHCDDPSDIEKQSGEISNHDLATERVDQSVLTIVVPASESINSQDPTL
ITDPVGNISTIVESPKKPYLSRNHSFQEQCRVCQEEKEEELIDLGCHCRGGLAKAHRTCI
DTWFSTRGSNKCEICQQVAVNVASPEAHAPGCLNPLWVAFCILIGGLFLDVLISITLGVS
ALPVNIIIGVIVVLGLGTALRLALEFCHDRSIRSVVHRLEGNVSLGYHPTV*

Transcript Sequence

Transcript ID

Solyc08g013710.3.1
Transcript Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* AT2G37950.1)
Sequence

GAAAAGATTCCATTAGTATCTTTGGTCCCTAAACCACCGCGGCGGCCAAAGTAAAAATGA
CTTGTGTCCGTCCGGTCCACAACTATTTTCAACTTTCCATTGAATCAACTTCACTCACCG
CTACCGTCTCAGGTCTCCTCTCTCTCTCTCTCTGTTGCACCAACACATTTCTATATCTTT
ACCTAACAATGTTTCTACTTTCTTTATTTTCTTTGCTTGCTTCTAAGTTAAAAATCGATT
CAAACAATAATTTATCTAATTGAGGGATTGAATTGTGAACTGCACCATAATTTTGATATG
GGAGGAATGTTAAAAAGGGTTGCAAAAGGATAGCAACGCGTTTGCTTGGTTCTTTTGTAT
TTGTTACCAATGCAAGATGTCGGTGTAGTCCGGCATGATAGTACCGTTCACTGTGATGAT
CCTTCTGATATTGAAAAGCAGAGTGGGGAGATCAGCAATCATGACTTAGCTACTGAAAGA
GTGGATCAATCTGTACTCACCATAGTGGTTCCTGCAAGCGAATCAATCAACTCCCAGGAT
CCAACATTAATCACAGACCCAGTTGGGAACATTTCCACCATTGTAGAGTCTCCTAAGAAG
CCTTACTTATCCAGGAATCATAGCTTTCAGGAACAATGCAGAGTATGTCAAGAGGAAAAA
GAGGAAGAATTGATCGATCTTGGATGCCACTGTCGTGGTGGATTGGCAAAAGCACATCGG
ACATGCATAGATACATGGTTTAGTACTAGAGGTTCAAATAAATGTGAAATATGCCAGCAA
GTAGCTGTAAATGTGGCATCTCCAGAGGCTCATGCACCTGGTTGTCTTAATCCACTTTGG
GTTGCGTTTTGTATCCTCATTGGCGGTCTGTTTCTGGATGTGTTAATATCAATTACGCTT
GGAGTCTCTGCACTGCCTGTGAACATCATAATCGGGGTAATAGTTGTGCTGGGACTCGGA
ACAGCTCTTCGGCTTGCCCTTGAGTTCTGCCATGATCGGAGTATCAGAAGTGTAGTTCAC
CGGTTAGAAGGAAACGTCAGTCTTGGATATCATCCTACGGTATAATTGTTCATACACCCT
GAAAACATTGAAATTTATCCAGCCTGCAACTTGAAAGATTTGTTGGAGCCAGTATTTTTT
TAGATGACAATTTCTGATTGATAACGTACTTTACCCATTGTATTTATTTCGTTTGAGGAT
GCAGTGTGCAGTTTGACATCTTGTTTTGCAGCTTTGATATCTCTATATACAACAGCCTCT
ATTCCCAAAATTACTTTAGAACACAATAACTTTCTGTAGCTTTAAGTGTTTATTTTTTGT
CTTTATGCTGCTAGGTGCCTAGCTAATAAGTTGCCTTATTCCCCTTTTTTCATTTTTGCC
TGTATCAGACATCTTGTGCAGTGTACTTGGTGACTGCTGTGAGTAATTTATGCATTTATC
TATCACACAATTAAAAACTTATAAATCTATGCATGGCTCTTGTCTA