Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g008530.1.1
CDS Infomation

2-keto-3-deoxy-L-rhamnonate aldolase (AHRD V3.3 *** W9QTL7_9ROSA)
Sequence

ATGGCTGCCATGGCCGGATTTTCTTCTTCTTCTTCTTCATCTCTATCAACTCTTCGAAAA
TCCTTTACTTCCACTTCGCCTATTTTCCCTTCATTCCATTCTCTGCTTCCGCGAATTCCA
AAACCTTCATCACTCAAAACGGTAAACCCAACCTTCAAACCCTCCCTACCACGCCGATTC
TCCTCCGCTGTTGCCGCCACCGCCGATTCCGCCGAAGTTAGACAATCCCTCAAAACTCGC
TTGAAAAATGGAGAAACCCTTTACGGCATTTTCCTTCTCGGTTTCTCTCCAACCCTCGCT
GAGATCGCTGGACTCGCCGGATACGACTTCGCCGTCGTCGATATGGAACATGGTCACGGA
GGTATCTCCGATGCACTCCCTTGTCTTCATGCCTTAGCCGCTACTCAAACCCCAGCTATT
CTCCGTATCCCTGAATCCTCAGCTACTTGGGCTAAAAAAGCCCTCGATCTCGGCCCACAG
GGCATTATGTTTCCGATGATCGACGGTCCGAAATCAGCCCGAAAGGCAGTGTCTTACTGC
CGTTTCCCGCCTAATGGCGTACGTGGATCTGCTCATACTGTTGTTAGAGCTTCGAGCTAT
GGAATTGATGAAGGGTATTTGAGTAATTACGAGGATGATCTACTGATCATGTGTCAAGTT
GAGTGTGTAGATGGAGTGAAGAAGATTGATGAAATTGCAGCAGTGGAAGGGGTTGATTGT
ATTCAAATGGGACCATTGGATTTGAGTGCGAGTTTAGGGTACTTATGGGATCCTGGGAAT
AAGAAAGTGAAGGAGATGATGAATACAGCTGAAAAAGGAGCATTGAAGAAGAAGCCACTT
GACGGTGGGGCGTATTTATCTGGATTTGCAATGCCTCATGATAGTCCTGAGAATTTGAAA
TCAAGAGGGTACCATATGGTTTCAGGAGCAGTAGATATCGCGTTGTTTAGAAATGCAGCT
GTGGAGGATGTGAACAAGTTTAAGATGAGTTTGGATAAAGGATTTGAAGATCAAAAAGAT
CATAAAGATGGTGAAGAGAAGTACTGGAGTGAGTAA

Peptide Sequence

PEP ID

Solyc08g008530.1.1
PEP Infomation

2-keto-3-deoxy-L-rhamnonate aldolase (AHRD V3.3 *** W9QTL7_9ROSA)
Sequence

MAAMAGFSSSSSSSLSTLRKSFTSTSPIFPSFHSLLPRIPKPSSLKTVNPTFKPSLPRRF
SSAVAATADSAEVRQSLKTRLKNGETLYGIFLLGFSPTLAEIAGLAGYDFAVVDMEHGHG
GISDALPCLHALAATQTPAILRIPESSATWAKKALDLGPQGIMFPMIDGPKSARKAVSYC
RFPPNGVRGSAHTVVRASSYGIDEGYLSNYEDDLLIMCQVECVDGVKKIDEIAAVEGVDC
IQMGPLDLSASLGYLWDPGNKKVKEMMNTAEKGALKKKPLDGGAYLSGFAMPHDSPENLK
SRGYHMVSGAVDIALFRNAAVEDVNKFKMSLDKGFEDQKDHKDGEEKYWSE*

Transcript Sequence

Transcript ID

Solyc08g008530.1.1
Transcript Infomation

2-keto-3-deoxy-L-rhamnonate aldolase (AHRD V3.3 *** W9QTL7_9ROSA)
Sequence

ATGGCTGCCATGGCCGGATTTTCTTCTTCTTCTTCTTCATCTCTATCAACTCTTCGAAAA
TCCTTTACTTCCACTTCGCCTATTTTCCCTTCATTCCATTCTCTGCTTCCGCGAATTCCA
AAACCTTCATCACTCAAAACGGTAAACCCAACCTTCAAACCCTCCCTACCACGCCGATTC
TCCTCCGCTGTTGCCGCCACCGCCGATTCCGCCGAAGTTAGACAATCCCTCAAAACTCGC
TTGAAAAATGGAGAAACCCTTTACGGCATTTTCCTTCTCGGTTTCTCTCCAACCCTCGCT
GAGATCGCTGGACTCGCCGGATACGACTTCGCCGTCGTCGATATGGAACATGGTCACGGA
GGTATCTCCGATGCACTCCCTTGTCTTCATGCCTTAGCCGCTACTCAAACCCCAGCTATT
CTCCGTATCCCTGAATCCTCAGCTACTTGGGCTAAAAAAGCCCTCGATCTCGGCCCACAG
GGCATTATGTTTCCGATGATCGACGGTCCGAAATCAGCCCGAAAGGCAGTGTCTTACTGC
CGTTTCCCGCCTAATGGCGTACGTGGATCTGCTCATACTGTTGTTAGAGCTTCGAGCTAT
GGAATTGATGAAGGGTATTTGAGTAATTACGAGGATGATCTACTGATCATGTGTCAAGTT
GAGTGTGTAGATGGAGTGAAGAAGATTGATGAAATTGCAGCAGTGGAAGGGGTTGATTGT
ATTCAAATGGGACCATTGGATTTGAGTGCGAGTTTAGGGTACTTATGGGATCCTGGGAAT
AAGAAAGTGAAGGAGATGATGAATACAGCTGAAAAAGGAGCATTGAAGAAGAAGCCACTT
GACGGTGGGGCGTATTTATCTGGATTTGCAATGCCTCATGATAGTCCTGAGAATTTGAAA
TCAAGAGGGTACCATATGGTTTCAGGAGCAGTAGATATCGCGTTGTTTAGAAATGCAGCT
GTGGAGGATGTGAACAAGTTTAAGATGAGTTTGGATAAAGGATTTGAAGATCAAAAAGAT
CATAAAGATGGTGAAGAGAAGTACTGGAGTGAGTAA