Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g008180.2.1
CDS Infomation

Loricrin-like (AHRD V3.3 *** A0A0K9PKU0_ZOSMR)
Sequence

ATGGACTCCAGATTCCACTATTTGGGGTTTGCTGCAAACCCTTCATCGAATACATCCAAG
AGTATGGGAGATTCTATCCGAGTAAACGAAGCTGAAGCTGAAGGTGCCGATTGTGCTAAT
ACCACCCTGCAACTTGATTCCGTTGGGTCCTTAATGCCTTTATTCCCTGCTACAAAGGAA
ATAAAACACAATTGGAGCTTGATTCGTGGATCTGTTGATCAGCAAATTGGTTCATCTTTG
TGTCTAAGCTTAGGCCATTCATCAAGTGCCTTGGAAAGTAAGTGGAGTTCAGGCATTGTA
TGTACCTCAATATCTCCAGCGAAAGAAATTGGCGAGTCCTCAATGGACTTGGAGGTGGAC
TTCGGTCTTTATCTGGCCAATGATAAGAAACTAAGTGATCTGGAATTGAGTCTTTCCAGT
AGTGCTGCTGAATCTGATGTTACCAGTTTGCATCTGACCTCCACTTCACCTCAAAGTGTC
ATAAAGGTGCCACATGGTTTTGGTGGAGTTCGTCAGACTCATGAAGTATCAGTGGTTTCT
CATTGGAAGACCAGTAGCATTTTTCATCCGTTACATGTGCCACAGGACGAAGGGTCTAGT
TACTTCTCGAAACAGGTGACAAAAGAAATTGAGCCATCTTCAGTCTCTCCTGATCCTTCC
TCAAGTATAGTAACAAATCAAAATAGCTCAGTCACTTGTACTTCCGGAACAAAGAAGCAG
CAACGCAACAGTGTCATCAAACAATGTCAGTTCAAGGATTGTGTTAAAGGAGCAAGGGGT
GCTTCCGGCTTTTGCATTGCCCATGGTGGAGGACGTAGGTGTCAAAAACCAGACTGCCAT
AAGGGAGCTGAAGGTCGAACTGCCTTTTGTAAAGCCCATGGCGGTGGTCGGCGGTGTAAA
TTCCTTGATTGTACCAAGAGTGCAGAAGGACGCACTGGTTTCTGGTGGGGTTCACATGGA
GGTGGCCGGCGGTGTCAGTACCCCCAGTGCTCTAAAGGGGCACAAGGAAGCACCATGTTT
TGCAAAGGCCACGGTGGTGGGAAACGTTGCACATTTGAAGGGTGCAATAAGGGCGCAGAG
GGGAGCACACCTTTCTGTAAGGGTCATGGTGGAGGGAAAAGATGTTCATTTGAAGGAGGT
GGGATTTGCCCAAAGAGTGTTCACGGAGGGACTCTCTTCTGTGTTAAACACGGTGGTGGT
AAGAGATGTGCTGTACCAGAGTGCTCCAAGAGTGCTAGGGGCAAGTTCATAGACTGTACA
AAAAGTGCTCAGGGAAGCACTGATTTCTGCAAGGCGCATGGCAGCGGAAAAAGATGTTCT
TGGGGTCAACCTGATTCCGGATTCAGCCAAAATGATAGTACTTGTGACTCATTTGCAAAA
GGGAAGAGTGGACTTGTTGAATCTCATGGTGCCCTGGAGCAAGACAAACGCGTTCATGGT
GGTGGTGATACTTTAGGGGCTTCGACCTTGGATTCAACACCCCTAAATCCTGGGAAGATG
AAGGAGATTGATATCATGAACACAGGTAGTAATGTTTTGACATCTACCGGTTGGAACTAT
TTTGGATTCAATCAAACCTTAAACATTCGATTGGACTTTGAGAAGAGTAACTCATCATAA

Peptide Sequence

PEP ID

Solyc08g008180.2.1
PEP Infomation

Loricrin-like (AHRD V3.3 *** A0A0K9PKU0_ZOSMR)
Sequence

MDSRFHYLGFAANPSSNTSKSMGDSIRVNEAEAEGADCANTTLQLDSVGSLMPLFPATKE
IKHNWSLIRGSVDQQIGSSLCLSLGHSSSALESKWSSGIVCTSISPAKEIGESSMDLEVD
FGLYLANDKKLSDLELSLSSSAAESDVTSLHLTSTSPQSVIKVPHGFGGVRQTHEVSVVS
HWKTSSIFHPLHVPQDEGSSYFSKQVTKEIEPSSVSPDPSSSIVTNQNSSVTCTSGTKKQ
QRNSVIKQCQFKDCVKGARGASGFCIAHGGGRRCQKPDCHKGAEGRTAFCKAHGGGRRCK
FLDCTKSAEGRTGFWWGSHGGGRRCQYPQCSKGAQGSTMFCKGHGGGKRCTFEGCNKGAE
GSTPFCKGHGGGKRCSFEGGGICPKSVHGGTLFCVKHGGGKRCAVPECSKSARGKFIDCT
KSAQGSTDFCKAHGSGKRCSWGQPDSGFSQNDSTCDSFAKGKSGLVESHGALEQDKRVHG
GGDTLGASTLDSTPLNPGKMKEIDIMNTGSNVLTSTGWNYFGFNQTLNIRLDFEKSNSS*

Transcript Sequence

Transcript ID

Solyc08g008180.2.1
Transcript Infomation

Loricrin-like (AHRD V3.3 *** A0A0K9PKU0_ZOSMR)
Sequence

ATAATGTGCTCATTTTGTTTCTCTCCCTTGTTGGCTGCTGAAATCATATAAGCCCTAGTT
CATTCTTTATCTCAATTTCACTTTACACATACTTTCTGAGGTTTTGAAACAAACCCCACC
TGCAAAAATTATCAAAAAAAAAAAAAAGAAGTTTCCTCCTGAAAAGTCTTGAGGTGGAAA
GCAAAGAAGGAATTGAATCTGGAGTGTTCTGCCTGATTTCAATTAATTTGGCTGATTTTT
TTATTTTTTTTGGATTTAAACGAGCAAGAAGGAAAGAGTACACAAAGCAACATGATTCTT
TAGTATGGTAGAACATGAAATGAGGTTTAGTGAAGAATCCTATTTGTGAACTTGGTGTAA
AGTTTGATATCTAATGGATAGAAAGGATACTTCTGGATTCGTAAGCGGGGGTGGGATGTG
CTCTTTTTGACACATCTAACCTTAGTTTAGCTACTAACTAATTTTTAGGCTGGAAGGGAG
GCGTCTGTTCTTTTGCAAATTGCAGTTGAGATTTGGTTCAATAGGAGTGTTGCATCCTAG
TATTTGGTCATGGACTCCAGATTCCACTATTTGGGGTTTGCTGCAAACCCTTCATCGAAT
ACATCCAAGAGTATGGGAGATTCTATCCGAGTAAACGAAGCTGAAGCTGAAGGTGCCGAT
TGTGCTAATACCACCCTGCAACTTGATTCCGTTGGGTCCTTAATGCCTTTATTCCCTGCT
ACAAAGGAAATAAAACACAATTGGAGCTTGATTCGTGGATCTGTTGATCAGCAAATTGGT
TCATCTTTGTGTCTAAGCTTAGGCCATTCATCAAGTGCCTTGGAAAGTAAGTGGAGTTCA
GGCATTGTATGTACCTCAATATCTCCAGCGAAAGAAATTGGCGAGTCCTCAATGGACTTG
GAGGTGGACTTCGGTCTTTATCTGGCCAATGATAAGAAACTAAGTGATCTGGAATTGAGT
CTTTCCAGTAGTGCTGCTGAATCTGATGTTACCAGTTTGCATCTGACCTCCACTTCACCT
CAAAGTGTCATAAAGGTGCCACATGGTTTTGGTGGAGTTCGTCAGACTCATGAAGTATCA
GTGGTTTCTCATTGGAAGACCAGTAGCATTTTTCATCCGTTACATGTGCCACAGGACGAA
GGGTCTAGTTACTTCTCGAAACAGGTGACAAAAGAAATTGAGCCATCTTCAGTCTCTCCT
GATCCTTCCTCAAGTATAGTAACAAATCAAAATAGCTCAGTCACTTGTACTTCCGGAACA
AAGAAGCAGCAACGCAACAGTGTCATCAAACAATGTCAGTTCAAGGATTGTGTTAAAGGA
GCAAGGGGTGCTTCCGGCTTTTGCATTGCCCATGGTGGAGGACGTAGGTGTCAAAAACCA
GACTGCCATAAGGGAGCTGAAGGTCGAACTGCCTTTTGTAAAGCCCATGGCGGTGGTCGG
CGGTGTAAATTCCTTGATTGTACCAAGAGTGCAGAAGGACGCACTGGTTTCTGGTGGGGT
TCACATGGAGGTGGCCGGCGGTGTCAGTACCCCCAGTGCTCTAAAGGGGCACAAGGAAGC
ACCATGTTTTGCAAAGGCCACGGTGGTGGGAAACGTTGCACATTTGAAGGGTGCAATAAG
GGCGCAGAGGGGAGCACACCTTTCTGTAAGGGTCATGGTGGAGGGAAAAGATGTTCATTT
GAAGGAGGTGGGATTTGCCCAAAGAGTGTTCACGGAGGGACTCTCTTCTGTGTTAAACAC
GGTGGTGGTAAGAGATGTGCTGTACCAGAGTGCTCCAAGAGTGCTAGGGGCAAGTTCATA
GACTGTACAAAAAGTGCTCAGGGAAGCACTGATTTCTGCAAGGCGCATGGCAGCGGAAAA
AGATGTTCTTGGGGTCAACCTGATTCCGGATTCAGCCAAAATGATAGTACTTGTGACTCA
TTTGCAAAAGGGAAGAGTGGACTTGTTGAATCTCATGGTGCCCTGGAGCAAGACAAACGC
GTTCATGGTGGTGGTGATACTTTAGGGGCTTCGACCTTGGATTCAACACCCCTAAATCCT
GGGAAGATGAAGGAGATTGATATCATGAACACAGGTAGTAATGTTTTGACATCTACCGGT
TGGAACTATTTTGGATTCAATCAAACCTTAAACATTCGATTGGACTTTGAGAAGAGTAAC
TCATCATAAAGATGTTTCCATAACATCATTTGTATATCTGAGTTTGATAACATTGT