Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g008160.3.1
CDS Infomation	WD-repeat protein (AHRD V3.3 *** E5GBV4_CUCME)
Sequence	ATGCCTCGTACTACTACTGTGGAGAGCTCTGGATGCCCTCCTCTTAGAGCTTTGACGTTT GACATTCTTGGACTTATTAAAGTTGTTGAAGCTAAGGGTGAACAGAAGGAAGCTCCAAAG GTGGTGGAGAAATGGGGGGAACCTGATGCTTCGAGGTGTGTGCTTGCGGCGTCACTTGTT GACCGTGAATTTGACCCTCTACTTGGTGTAGCAAGGAAAAGCGGCAAGATTGAGGTTCTT AGTCCAGTCAATGGAGATGTTCGTGCATCCATTTCAATTGAAAGTCAAAATCATCCAGGA TCGACAGATAATTCTATTGTTGGTTTGCATTTATTCAAAGGAGAAAGATTGGGCTCATCA TCAAGGTCATGCAACCTGCTCACATGCACAAGCAAAGGACAAGCAAACATGACATATGTT AAAATGTCTGAATCACTTGAAGATTCTGGTGGTGAAAGTACTCAAACAACATGGAATGTT TGTGGTTCAGGCAGTATTTTGTTCTGTAAGGTAGATGCAGATGAAAGCTATGCATTGTTT GGTGGGAAGGGTGTTGAGGTTAATATCTGGGATCTGAGCCAGTGTGCTAAAGTTTGGTCT GCAAAATCTCCAGCCAAAAACAGCCTCGGCATATTCACCCCAACTTGGTTTACATCTGCA ACTTTCTTATGCAAAGATGATCACCGCAAATTTGTTGCAGGCACTAATAGTCACCAGGTG CGTCTTTATGATATTTCTGCTCAGAGAAGGCCAGTTGTTTCATTTGATTTTCGTGAGACC CCTATTAAAGCTGTGGCAGAGGATGAGGATGGACATACGATATACATAGGAAATGGGTCT GGCGATCTTGCTTCTTTTGACATCCGCACAGGGAAACTTTTGGGATCCTTCTTGGGGAAA TGTTCGGGAAGTATAAGATCCATAGTTAAGCATCCAGAGCTTCCAGTTATAGCCTCATGT GAAGCTCAGGTACCTCCTCAGCAACACGATACAGATGAAACATTACAGACGGAAGAAGAG GAAGAGAAGACTGTTAAACGCAAGAAGGCATCAAAAGAACACAGCGGAAGCAAAAAACTG AAGACCAAGAAAAAAAGTAAAAGGTCGAAAGGAGACAGTAACGACATTGCCTAA

Peptide Sequence

PEP ID	Solyc08g008160.3.1
PEP Infomation	WD-repeat protein (AHRD V3.3 *** E5GBV4_CUCME)
Sequence	MPRTTTVESSGCPPLRALTFDILGLIKVVEAKGEQKEAPKVVEKWGEPDASRCVLAASLV DREFDPLLGVARKSGKIEVLSPVNGDVRASISIESQNHPGSTDNSIVGLHLFKGERLGSS SRSCNLLTCTSKGQANMTYVKMSESLEDSGGESTQTTWNVCGSGSILFCKVDADESYALF GGKGVEVNIWDLSQCAKVWSAKSPAKNSLGIFTPTWFTSATFLCKDDHRKFVAGTNSHQV RLYDISAQRRPVVSFDFRETPIKAVAEDEDGHTIYIGNGSGDLASFDIRTGKLLGSFLGK CSGSIRSIVKHPELPVIASCEAQVPPQQHDTDETLQTEEEEEKTVKRKKASKEHSGSKKL KTKKKSKRSKGDSNDIA*

Transcript Sequence

Transcript ID	Solyc08g008160.3.1
Transcript Infomation	WD-repeat protein (AHRD V3.3 *** E5GBV4_CUCME)
Sequence	ATGCCTCGTACTACTACTGTGGAGAGCTCTGGATGCCCTCCTCTTAGAGCTTTGACGTTT GACATTCTTGGACTTATTAAAGTTGTTGAAGCTAAGGGTGAACAGAAGGAAGCTCCAAAG GTGGTGGAGAAATGGGGGGAACCTGATGCTTCGAGGTGTGTGCTTGCGGCGTCACTTGTT GACCGTGAATTTGACCCTCTACTTGGTGTAGCAAGGAAAAGCGGCAAGATTGAGGTTCTT AGTCCAGTCAATGGAGATGTTCGTGCATCCATTTCAATTGAAAGTCAAAATCATCCAGGA TCGACAGATAATTCTATTGTTGGTTTGCATTTATTCAAAGGAGAAAGATTGGGCTCATCA TCAAGGTCATGCAACCTGCTCACATGCACAAGCAAAGGACAAGCAAACATGACATATGTT AAAATGTCTGAATCACTTGAAGATTCTGGTGGTGAAAGTACTCAAACAACATGGAATGTT TGTGGTTCAGGCAGTATTTTGTTCTGTAAGGTAGATGCAGATGAAAGCTATGCATTGTTT GGTGGGAAGGGTGTTGAGGTTAATATCTGGGATCTGAGCCAGTGTGCTAAAGTTTGGTCT GCAAAATCTCCAGCCAAAAACAGCCTCGGCATATTCACCCCAACTTGGTTTACATCTGCA ACTTTCTTATGCAAAGATGATCACCGCAAATTTGTTGCAGGCACTAATAGTCACCAGGTG CGTCTTTATGATATTTCTGCTCAGAGAAGGCCAGTTGTTTCATTTGATTTTCGTGAGACC CCTATTAAAGCTGTGGCAGAGGATGAGGATGGACATACGATATACATAGGAAATGGGTCT GGCGATCTTGCTTCTTTTGACATCCGCACAGGGAAACTTTTGGGATCCTTCTTGGGGAAA TGTTCGGGAAGTATAAGATCCATAGTTAAGCATCCAGAGCTTCCAGTTATAGCCTCATGT GAAGCTCAGGTACCTCCTCAGCAACACGATACAGATGAAACATTACAGACGGAAGAAGAG GAAGAGAAGACTGTTAAACGCAAGAAGGCATCAAAAGAACACAGCGGAAGCAAAAAACTG AAGACCAAGAAAAAAAGTAAAAGGTCGAAAGGAGACAGTAACGACATTGCCTAATCGTAT TGCTTTCCAAGAATCCCTTATTATCGACACATCTCTAATGCACGAGTTCAGCTAAAAGGA TACCTCAACATACACTAGAACATGGTGAGATGATTAGTGTGAATTCATGGCAGCATTCGT CCAAGTTAGAAGAACTCGGGAACACGAGTGAGTTCTTTGTTAAATATAAGCTAGCTAGTT GAAGGCGGGCAT