Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g008130.3.1
CDS Infomation	E3 SUMO-protein ligase pli1 (AHRD V3.3 *** A0A0B0PPF6_GOSAR)
Sequence	ATGGCCGGAGCGACGGTGAACTCTATCCCGGCGACCGGCGTTAACGCCGGAGTTGGCAGA GGAGCCAATATGACTGGCGCGTCATACGTAAATTCGTTTCGAATCTCCGCCGTAGCTGAC CGATTAGCAAAGCATGTGTGTAATCAGCCCAAAATTGACCCTCAGGAGTTCGTTCACCTC TGCCTATCACTTGCAAGAGGCATTGATTTTGCCATTGCAAACCGGGAGGTTCCAAATAGA GCTCAAGATTTACCTTTATTGGTGAAACAGGTATGCAGAATCCCCTGTGATACATTACTG CTAGCACATGTCATGGTCCTTATGATTTCTGTCAAGAATGCTTGTCATAGTGGGTGGTTT ACAGAGAAAGATGCCAAGGAACTTTGTGATCTTGCCAATGAGATATACAGCAGCTTCTGC ACCACATTAGATTTTAACACTGAACCAAGCAATTCTTCGACAATTATCTCGACGATAATG TCTAGATTTTATCCACGGCTGAAAATGGGTCAGATAGTTTCTTTCTTGGAGGCCAAGCCT GGATTTGGTGCCTATGTGAATGATTTCCAGATAACAAAGAATATGAACCTTTCTGAAGGA GAGAAAGTGAGACTATTTGTTGCACAAATAGATAATCTGGAGACCTCACTATGTATTGTT ACGCCTCCTCAAGTGAACTTTCTTCTAAATGGGACTCCCGTCGGAAGGAGGACTAATGTG TCAATGGACCCTGGACCTCAGCTTCCATCTCCTGTACCTCATATGCTTAAATTTGGAACA AATCTTCTTCAAGCTGTGGGCCAATTTAGCGGAAATTATATCATAGTTGTTGCCTTCATG AGTGAGATCTCTACTCCTGTTCAGGCCACACTCCCTGATTATGAGCAGGCTCCTGTTTCT TCTGTTGATCCAGATTCTGAGATTATTGAGGGGCCATCAAGAATTTCTCTGAATTGCCCT ATAAGCTTTAAGCGTATTAAAACTCCAGTAAAAGGACGTTCTTGCAAACATCTTCAGTGT TTTGATTTTGACAACTATATTGACATAAATTCAAGGAGACCATCGTGGCGTTGTCCTCAT TGTAATCAACATGTGTGTTTCACTGATATTCATATTGATCAAGATATGTTCAAGGTTTTG AAAGAGGTGAGTGAGGATGTTACAGATGTCATGATCTCTTCAGATGGTTCATGGAAGGCA ATCATGGAAAGTGATGACCATTCTGAAAAGCCCAGGGATAAAACCCCTGAAATTGCTCAA GATAGTCCACGTAGAGGTTCTGATGGTCCTTCAAATGCCCCTGGTGATGTTTTAGATCTT ACTGACATAGATGATGACATGAATCCTGCTGAAACTGAAGACAGCAAAAATTTTCCTACG AACATTCAAATGCAATCTAATGTTCAGAAAACAACAGCTGTGAGTAATCCAAATGAAATC AATCAGACAGGTGCTCCTGATATGACAGATGATTTCTGGTCAAGAATCTATTTGTCCTCG TGTGGAATAGGGACATCTAGTTCTTGGTCCAATATGCAAACTGGCAGTGCTTCTGAGCCT GCTAGAACAGACTTGGTCCAGTTGCCTGTCTTCACAGATGCAATATCTCCCGCTCTCAAC ACGGAGGGAAATACTTTTATTCCAACCTCTATACTTGAGAGTGGACTATCTTCTTCCAAT TTGCTGCAGCTGCAGTTACAACAGTTCCAATTTGGGAACTCTGCGCTCAGTAATGAATAT GGAAGGTTTCCAACTGCAGCCAGGCCTGCAAACAGATCTCCTGTTGCAGTTCAGGCCCTT CCAGCTCAGATGAACACTCCTGTTCCTCAGCAGAGACAACAAAGCGCAATGAATCCCTTG CTCCATGCAGGTCCTTCAGCTGCTGCTCAGGATTTGCCTATTGCGTCATTGAGTGGTTCC AATCTAAGAAGTGAATTGGAGAGACATTCCTTTTCTGACTTGGACCTGGTTCAGACACGC ATGACCTCATCAGCATTACCGCAGAAGCGTTCTCTTCCTCATGTTCAACCATCTCAACAT TCTGTTGGCCGTCAAAGTCCCAGCATGAGAACACCCTATCCGATGAACCAGTCTCAAGGT CCGTCCCAATCAGCTACTTGGGATAGATGGGAAGCCCTGAAGCAAGGAAGTTCACAAGCT GGTGTTAATCGGGCACTTCCTGGTGGACAACACGCCCGAGTTGTCACTACTCAGCAATCC ACTCAGGTTGTGAGACCTGTTTTTTCTCCTAGAACTGTGTCCCCACTCCCAGGTAGTGCT GACAGGTTCAGGACACCATTGCCCCCAGACCAGAGGGGTAGTAGTAGTACAGGAGGCACA ACCCCAGTCACAAGGACAGATAGTTCCGTGGATCCCCAGCTAGATCCAAACTGGCGGCCT ACAGGCCGTATGCGTGGAAGCCTTTCAGGAAGAGCTTATTCTGAAGCACTGCAACAGTTC ATACTTAAGCCAACACAGCAAGCTCAAGCTGCCAGACCATCTATTCCACCTAATCTTTCA CCCCAACTGCAAGTCCTTTTGGCTAATAGAGGTGCTCATAGTACCCAGCCAGTAAACTTT CCATCTACAGCTCCTGCCAATGCATCTGATATTTCAGGCATTCTACCCGAGCGCTCCTCA GGAATGCAGTAG

Peptide Sequence

PEP ID	Solyc08g008130.3.1
PEP Infomation	E3 SUMO-protein ligase pli1 (AHRD V3.3 *** A0A0B0PPF6_GOSAR)
Sequence	MAGATVNSIPATGVNAGVGRGANMTGASYVNSFRISAVADRLAKHVCNQPKIDPQEFVHL CLSLARGIDFAIANREVPNRAQDLPLLVKQVCRIPCDTLLLAHVMVLMISVKNACHSGWF TEKDAKELCDLANEIYSSFCTTLDFNTEPSNSSTIISTIMSRFYPRLKMGQIVSFLEAKP GFGAYVNDFQITKNMNLSEGEKVRLFVAQIDNLETSLCIVTPPQVNFLLNGTPVGRRTNV SMDPGPQLPSPVPHMLKFGTNLLQAVGQFSGNYIIVVAFMSEISTPVQATLPDYEQAPVS SVDPDSEIIEGPSRISLNCPISFKRIKTPVKGRSCKHLQCFDFDNYIDINSRRPSWRCPH CNQHVCFTDIHIDQDMFKVLKEVSEDVTDVMISSDGSWKAIMESDDHSEKPRDKTPEIAQ DSPRRGSDGPSNAPGDVLDLTDIDDDMNPAETEDSKNFPTNIQMQSNVQKTTAVSNPNEI NQTGAPDMTDDFWSRIYLSSCGIGTSSSWSNMQTGSASEPARTDLVQLPVFTDAISPALN TEGNTFIPTSILESGLSSSNLLQLQLQQFQFGNSALSNEYGRFPTAARPANRSPVAVQAL PAQMNTPVPQQRQQSAMNPLLHAGPSAAAQDLPIASLSGSNLRSELERHSFSDLDLVQTR MTSSALPQKRSLPHVQPSQHSVGRQSPSMRTPYPMNQSQGPSQSATWDRWEALKQGSSQA GVNRALPGGQHARVVTTQQSTQVVRPVFSPRTVSPLPGSADRFRTPLPPDQRGSSSTGGT TPVTRTDSSVDPQLDPNWRPTGRMRGSLSGRAYSEALQQFILKPTQQAQAARPSIPPNLS PQLQVLLANRGAHSTQPVNFPSTAPANASDISGILPERSSGMQ*

Transcript Sequence

Transcript ID	Solyc08g008130.3.1
Transcript Infomation	E3 SUMO-protein ligase pli1 (AHRD V3.3 *** A0A0B0PPF6_GOSAR)
Sequence	AATATTATTAAAATGTAAAGTGAATAAAAATATTGTCATAAGAAAAACAAAAATCTCGAT ATTATAAAGATGGCAGTAAATTGGAATAGAGCACTACTATTTACAGTGGAACTGTTTCGA CAAAACCGAAAAGTTCAGTGTGAGACAAGAAGAGCGAAACATGGCCGGAGCGACGGTGAA CTCTATCCCGGCGACCGGCGTTAACGCCGGAGTTGGCAGAGGAGCCAATATGACTGGCGC GTCATACGTAAATTCGTTTCGAATCTCCGCCGTAGCTGACCGATTAGCAAAGCATGTGTG TAATCAGCCCAAAATTGACCCTCAGGAGTTCGTTCACCTCTGCCTATCACTTGCAAGAGG CATTGATTTTGCCATTGCAAACCGGGAGGTTCCAAATAGAGCTCAAGATTTACCTTTATT GGTGAAACAGGTATGCAGAATCCCCTGTGATACATTACTGCTAGCACATGTCATGGTCCT TATGATTTCTGTCAAGAATGCTTGTCATAGTGGGTGGTTTACAGAGAAAGATGCCAAGGA ACTTTGTGATCTTGCCAATGAGATATACAGCAGCTTCTGCACCACATTAGATTTTAACAC TGAACCAAGCAATTCTTCGACAATTATCTCGACGATAATGTCTAGATTTTATCCACGGCT GAAAATGGGTCAGATAGTTTCTTTCTTGGAGGCCAAGCCTGGATTTGGTGCCTATGTGAA TGATTTCCAGATAACAAAGAATATGAACCTTTCTGAAGGAGAGAAAGTGAGACTATTTGT TGCACAAATAGATAATCTGGAGACCTCACTATGTATTGTTACGCCTCCTCAAGTGAACTT TCTTCTAAATGGGACTCCCGTCGGAAGGAGGACTAATGTGTCAATGGACCCTGGACCTCA GCTTCCATCTCCTGTACCTCATATGCTTAAATTTGGAACAAATCTTCTTCAAGCTGTGGG CCAATTTAGCGGAAATTATATCATAGTTGTTGCCTTCATGAGTGAGATCTCTACTCCTGT TCAGGCCACACTCCCTGATTATGAGCAGGCTCCTGTTTCTTCTGTTGATCCAGATTCTGA GATTATTGAGGGGCCATCAAGAATTTCTCTGAATTGCCCTATAAGCTTTAAGCGTATTAA AACTCCAGTAAAAGGACGTTCTTGCAAACATCTTCAGTGTTTTGATTTTGACAACTATAT TGACATAAATTCAAGGAGACCATCGTGGCGTTGTCCTCATTGTAATCAACATGTGTGTTT CACTGATATTCATATTGATCAAGATATGTTCAAGGTTTTGAAAGAGGTGAGTGAGGATGT TACAGATGTCATGATCTCTTCAGATGGTTCATGGAAGGCAATCATGGAAAGTGATGACCA TTCTGAAAAGCCCAGGGATAAAACCCCTGAAATTGCTCAAGATAGTCCACGTAGAGGTTC TGATGGTCCTTCAAATGCCCCTGGTGATGTTTTAGATCTTACTGACATAGATGATGACAT GAATCCTGCTGAAACTGAAGACAGCAAAAATTTTCCTACGAACATTCAAATGCAATCTAA TGTTCAGAAAACAACAGCTGTGAGTAATCCAAATGAAATCAATCAGACAGGTGCTCCTGA TATGACAGATGATTTCTGGTCAAGAATCTATTTGTCCTCGTGTGGAATAGGGACATCTAG TTCTTGGTCCAATATGCAAACTGGCAGTGCTTCTGAGCCTGCTAGAACAGACTTGGTCCA GTTGCCTGTCTTCACAGATGCAATATCTCCCGCTCTCAACACGGAGGGAAATACTTTTAT TCCAACCTCTATACTTGAGAGTGGACTATCTTCTTCCAATTTGCTGCAGCTGCAGTTACA ACAGTTCCAATTTGGGAACTCTGCGCTCAGTAATGAATATGGAAGGTTTCCAACTGCAGC CAGGCCTGCAAACAGATCTCCTGTTGCAGTTCAGGCCCTTCCAGCTCAGATGAACACTCC TGTTCCTCAGCAGAGACAACAAAGCGCAATGAATCCCTTGCTCCATGCAGGTCCTTCAGC TGCTGCTCAGGATTTGCCTATTGCGTCATTGAGTGGTTCCAATCTAAGAAGTGAATTGGA GAGACATTCCTTTTCTGACTTGGACCTGGTTCAGACACGCATGACCTCATCAGCATTACC GCAGAAGCGTTCTCTTCCTCATGTTCAACCATCTCAACATTCTGTTGGCCGTCAAAGTCC CAGCATGAGAACACCCTATCCGATGAACCAGTCTCAAGGTCCGTCCCAATCAGCTACTTG GGATAGATGGGAAGCCCTGAAGCAAGGAAGTTCACAAGCTGGTGTTAATCGGGCACTTCC TGGTGGACAACACGCCCGAGTTGTCACTACTCAGCAATCCACTCAGGTTGTGAGACCTGT TTTTTCTCCTAGAACTGTGTCCCCACTCCCAGGTAGTGCTGACAGGTTCAGGACACCATT GCCCCCAGACCAGAGGGGTAGTAGTAGTACAGGAGGCACAACCCCAGTCACAAGGACAGA TAGTTCCGTGGATCCCCAGCTAGATCCAAACTGGCGGCCTACAGGCCGTATGCGTGGAAG CCTTTCAGGAAGAGCTTATTCTGAAGCACTGCAACAGTTCATACTTAAGCCAACACAGCA AGCTCAAGCTGCCAGACCATCTATTCCACCTAATCTTTCACCCCAACTGCAAGTCCTTTT GGCTAATAGAGGTGCTCATAGTACCCAGCCAGTAAACTTTCCATCTACAGCTCCTGCCAA TGCATCTGATATTTCAGGCATTCTACCCGAGCGCTCCTCAGGAATGCAGTAGAACTAGGA CATGTTTGTTGGCGGCTATATTTAACGTCATAAATTTTGCATCCATGGTCACTTCACAGT ACAGATACACAAGACCCAGTGTTATATTACAGGTAGATAGGGAAAGACCGCCGTTCTTTC TTCTGTAAATTCCAGTCCAAAGTGATGCTCAACTCCCATCTCACACGCATCAGTTTGGCA CACTACTTCAATGTGACCAAGAAGTAGCCTCTGAGTTTTGTTATTATAGTAGGTAATATT TAATGAACATGTGTGGAATTTTTCTATTGTAATTCAATATGTTTGACATTTTATATAATG AAAAACTCTGGTTTCTACTAAAATAGAATCATTTGAATGAATGTTCCTTCTACCCAAAAT GGCTCTTGTTTCTAATGAAAGTCGTGGCAAAGTAATGAGTATTTGTTCTTGGTTGTTTTG GATGGACCCATAAAATTTTGAGCCCAAAAGAGTCTGTTGATAGGAAAATCAATGGACTTA ATATACATTGAGAAAATCACTAAATTCTTCTTTGAGTGATGGTAAAATAC