Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g007950.3.1
CDS Infomation	30S ribosomal S1 (AHRD V3.3 *** A0A0B0MP62_GOSAR)
Sequence	ATGAACAACCTTAGCCTTGACAAAACCTCAACACCCAACCCCTTGTTGTCAATTTCATCT TTACACCATTCAAGAATCTCAAAATCCCTTTGTTTACCCAGAAAAGTTCTTGTTTTTGCT GATAAAAATGATAATTCAGCCTCAATAACTAGTGGGTTTCTGTCAAAAACTCATTTTTCC TACAAAAAAGTAACTGTTTTTGCTGATAAAGATGACAATTCAAGTCCAGTAGCAAGTGGG GTTTTGTCAAGAACACATTTTTCCTCCAAAAAAGTTGCTGTTTTTGCCTCTAAAGATGAT AATTTTAGCTCAATAACAAGCGGGGTTTTGTCAAGAACTGTTTTTTCCTCCAGAAAGACA AAGAAATTTGTTGTTTTTGCTTCTAAAGATGATAGGAATAGTAATAAGCTTGACCAGTGG GACCAAATGGAACTCAAGTTTGGCAGATTAATTGGTGAAGACCCAAAACTTACCTTAGCT AAGATAATTAGTAGGAAAACAAACCCGGAGACATCTTATCTTGAAATTGAAGAGTCATTT GAGCAGAAGAAGGGAAAAACGTCTGGTGAAACTGTGGAGGTTCCGTTTGATGCATCCAAG CAAAAGAAATCTCTCAATTCATCAAATGGATTAAATTTGGTTCGCCCTGTGCCCAAGAAG GGTGTTAAGTTCGAGGTTGATGAAAAACAGCCAAAGACTGAGGGCTATAAACAAAGTCAA CCAATTTCAAGACCTGAAGTAAGTAGAAAAAGTAGTGTTCCAAATGTCATACTGCGAAAG CCAAGTTTGTATTCTGAGGAGGATGAATCATCAAAATTCAAAATTAAGCCAAACTTGACA CTGAAAATGGGCAGAGAACTGAAACCTGAGAAGTTTAGTGATGTTACATTGTTGAAGAAG CCGGAACCAATGAGGATCAGCTCCGACGATAGTGAAAAGAATGGACAATCAAGTGATAAG TCTAGTGATGCTACATTGTTGAAGAAGCCAGAACCAATGAGGATCAGCTCCGATGATAGT GAAAAGAATGGACAATCAAGCGATGTCTTGCCTGTATCTAGTGATGACTCCGAAGATGCT AGTCTTACAGAGGTGTACGCATCAAGTAGTGAACCCAAAAACAGCTTGCTTCTAAATAAG CCAGAGCCTAGTAATTTAAATCTAAAGATAGATCCAAATAAAGAATCTTCCGAGGTTCAG CATCCGAGTATTTCGGATGAAAGTACTTTCGATGCTGCTAACTCTTCTTCTGAGCTTATA AGTATGGCAGAGAGTAAACTCCGCCAACCGTTACAATCTAACAGAAGCAATCCTCTTGAG AAGCAAGGCTTTGGTACAGGATTCCAGCAGACTGATACACAGCCCGCTGAGAGAAGTTCT GATTCCAATACACCTGCTGAAACTGGACCCATGGAATCTTTGGATGCTGCTCTTCTTGGA AAACCGAAAAGATTAGACCGACCTAAAAAGGAAGCATCACGTGTTAGTCAGGAGGATATG CGTCCTGTCAAATCTGAGGGCTATGGAAATGCTTCAGAGATTGAAAACTTCCTGGCAAAA TCATCCATTAAGGAACATGAAGACAATGACTGGGTAAGAGCTGAAGAGCTTGTCAAGAGC GGAGGAAGAGAAGACGTGGAACTAGTCAGCTGTAGCACCAGAGGCTTTGTTGTATCTTTT GGTTCCTTGATAGGATTTTTGCCATATCGCAATCTTGCAGCCAGGTGGAAATTCTTAGCT TTTGAATCTTGGTTGAGGCAAAAAGGTTTGGATCCATCCCAATACAAGCAAGGTCTGGGG ATCATTGGAGGCTATGATGGTTTTGGCAAGGCAGCTTCTCCTGAGGCAGGAGTAGATCCG CAAATTGCTAAAAATGCCGATGAGGAGATCTCGCCAGATATGAAACTTGAAGATCTTCTC AGGATTTATGACCAAGAGAAACTCCAGTTCTTATCATCATTTGTTGGTCTGAGGATCAGA GTAAGTGTGGTGTTGGCTGACAGATATTCCAGAAGGCTAATATTCTCGTTAAAGGCAAAA GAAAAGGAAGAATTGGTCGAGAAGAAGAAGAGCCTTATGGCAAAACTTCAGGTTGGGGAC GTGGTAAAATGCTGTATACAAAAAATTACCTATTTCGGTATATTTGTCGAGGTTGAAGGA GTACTTGCGCTAATTCACCAGACAGAAGTCTCATGGGATGCCACTTTAGACCCTGCGTCG TATTTTAAAATTGGCCAGATTGTGGAGGCAAAAGTTCACCAGTTAGACTTTTCACTTGAG CGCATCTTCTTGTCATTGAAGGAAATAACGCCAGATCCCATGATGGAGGCCTTAGAGGCT GTAGTTGGTGATCCTGATAATTTGAATGGAGAACTCCAAGCATCAGAGCTGGATACTGAG TGGCCTGACGTGGAATCTCTTATCAAAGAATTAAAGCAGTTTGAGGGCATCTCCTCTGTA TCAAAAGGGCGGTACTTCTTGAGCCCTGGTTTGGCTCCAACATTTCAGGTTTATATGGCA TCCATGTTTGAGAATCAATACAAGTTACTTGCGCGGTCGGGAAATAGAGTACAAGAGGTT ATAGTGGAGACATCATTGAGTAAAGAGGAAATGAAATCTGCAATTCAATCTTGTACAAAC AAAGTTGAATAA

Peptide Sequence

PEP ID	Solyc08g007950.3.1
PEP Infomation	30S ribosomal S1 (AHRD V3.3 *** A0A0B0MP62_GOSAR)
Sequence	MNNLSLDKTSTPNPLLSISSLHHSRISKSLCLPRKVLVFADKNDNSASITSGFLSKTHFS YKKVTVFADKDDNSSPVASGVLSRTHFSSKKVAVFASKDDNFSSITSGVLSRTVFSSRKT KKFVVFASKDDRNSNKLDQWDQMELKFGRLIGEDPKLTLAKIISRKTNPETSYLEIEESF EQKKGKTSGETVEVPFDASKQKKSLNSSNGLNLVRPVPKKGVKFEVDEKQPKTEGYKQSQ PISRPEVSRKSSVPNVILRKPSLYSEEDESSKFKIKPNLTLKMGRELKPEKFSDVTLLKK PEPMRISSDDSEKNGQSSDKSSDATLLKKPEPMRISSDDSEKNGQSSDVLPVSSDDSEDA SLTEVYASSSEPKNSLLLNKPEPSNLNLKIDPNKESSEVQHPSISDESTFDAANSSSELI SMAESKLRQPLQSNRSNPLEKQGFGTGFQQTDTQPAERSSDSNTPAETGPMESLDAALLG KPKRLDRPKKEASRVSQEDMRPVKSEGYGNASEIENFLAKSSIKEHEDNDWVRAEELVKS GGREDVELVSCSTRGFVVSFGSLIGFLPYRNLAARWKFLAFESWLRQKGLDPSQYKQGLG IIGGYDGFGKAASPEAGVDPQIAKNADEEISPDMKLEDLLRIYDQEKLQFLSSFVGLRIR VSVVLADRYSRRLIFSLKAKEKEELVEKKKSLMAKLQVGDVVKCCIQKITYFGIFVEVEG VLALIHQTEVSWDATLDPASYFKIGQIVEAKVHQLDFSLERIFLSLKEITPDPMMEALEA VVGDPDNLNGELQASELDTEWPDVESLIKELKQFEGISSVSKGRYFLSPGLAPTFQVYMA SMFENQYKLLARSGNRVQEVIVETSLSKEEMKSAIQSCTNKVE*

Transcript Sequence

Transcript ID	Solyc08g007950.3.1
Transcript Infomation	30S ribosomal S1 (AHRD V3.3 *** A0A0B0MP62_GOSAR)
Sequence	CCGAGTGTTTAAGAGATTTAAAACCACATTATACAACATCATGTGCTAATCACGTGACAC CCCTTTACCCCTACACCACCAATTGTAAAACTCTCACTATCTCAATTTCAAATAACTCTT AAGAGAGGATAAATTGGAATTTTGAGGTGCCCATATATAAATTTTTCAATGCTGTTCAAT ATTATCTGATGAAATTCACTTTGTTTTTTCAAGAATGAACAACCTTAGCCTTGACAAAAC CTCAACACCCAACCCCTTGTTGTCAATTTCATCTTTACACCATTCAAGAATCTCAAAATC CCTTTGTTTACCCAGAAAAGTTCTTGTTTTTGCTGATAAAAATGATAATTCAGCCTCAAT AACTAGTGGGTTTCTGTCAAAAACTCATTTTTCCTACAAAAAAGTAACTGTTTTTGCTGA TAAAGATGACAATTCAAGTCCAGTAGCAAGTGGGGTTTTGTCAAGAACACATTTTTCCTC CAAAAAAGTTGCTGTTTTTGCCTCTAAAGATGATAATTTTAGCTCAATAACAAGCGGGGT TTTGTCAAGAACTGTTTTTTCCTCCAGAAAGACAAAGAAATTTGTTGTTTTTGCTTCTAA AGATGATAGGAATAGTAATAAGCTTGACCAGTGGGACCAAATGGAACTCAAGTTTGGCAG ATTAATTGGTGAAGACCCAAAACTTACCTTAGCTAAGATAATTAGTAGGAAAACAAACCC GGAGACATCTTATCTTGAAATTGAAGAGTCATTTGAGCAGAAGAAGGGAAAAACGTCTGG TGAAACTGTGGAGGTTCCGTTTGATGCATCCAAGCAAAAGAAATCTCTCAATTCATCAAA TGGATTAAATTTGGTTCGCCCTGTGCCCAAGAAGGGTGTTAAGTTCGAGGTTGATGAAAA ACAGCCAAAGACTGAGGGCTATAAACAAAGTCAACCAATTTCAAGACCTGAAGTAAGTAG AAAAAGTAGTGTTCCAAATGTCATACTGCGAAAGCCAAGTTTGTATTCTGAGGAGGATGA ATCATCAAAATTCAAAATTAAGCCAAACTTGACACTGAAAATGGGCAGAGAACTGAAACC TGAGAAGTTTAGTGATGTTACATTGTTGAAGAAGCCGGAACCAATGAGGATCAGCTCCGA CGATAGTGAAAAGAATGGACAATCAAGTGATAAGTCTAGTGATGCTACATTGTTGAAGAA GCCAGAACCAATGAGGATCAGCTCCGATGATAGTGAAAAGAATGGACAATCAAGCGATGT CTTGCCTGTATCTAGTGATGACTCCGAAGATGCTAGTCTTACAGAGGTGTACGCATCAAG TAGTGAACCCAAAAACAGCTTGCTTCTAAATAAGCCAGAGCCTAGTAATTTAAATCTAAA GATAGATCCAAATAAAGAATCTTCCGAGGTTCAGCATCCGAGTATTTCGGATGAAAGTAC TTTCGATGCTGCTAACTCTTCTTCTGAGCTTATAAGTATGGCAGAGAGTAAACTCCGCCA ACCGTTACAATCTAACAGAAGCAATCCTCTTGAGAAGCAAGGCTTTGGTACAGGATTCCA GCAGACTGATACACAGCCCGCTGAGAGAAGTTCTGATTCCAATACACCTGCTGAAACTGG ACCCATGGAATCTTTGGATGCTGCTCTTCTTGGAAAACCGAAAAGATTAGACCGACCTAA AAAGGAAGCATCACGTGTTAGTCAGGAGGATATGCGTCCTGTCAAATCTGAGGGCTATGG AAATGCTTCAGAGATTGAAAACTTCCTGGCAAAATCATCCATTAAGGAACATGAAGACAA TGACTGGGTAAGAGCTGAAGAGCTTGTCAAGAGCGGAGGAAGAGAAGACGTGGAACTAGT CAGCTGTAGCACCAGAGGCTTTGTTGTATCTTTTGGTTCCTTGATAGGATTTTTGCCATA TCGCAATCTTGCAGCCAGGTGGAAATTCTTAGCTTTTGAATCTTGGTTGAGGCAAAAAGG TTTGGATCCATCCCAATACAAGCAAGGTCTGGGGATCATTGGAGGCTATGATGGTTTTGG CAAGGCAGCTTCTCCTGAGGCAGGAGTAGATCCGCAAATTGCTAAAAATGCCGATGAGGA GATCTCGCCAGATATGAAACTTGAAGATCTTCTCAGGATTTATGACCAAGAGAAACTCCA GTTCTTATCATCATTTGTTGGTCTGAGGATCAGAGTAAGTGTGGTGTTGGCTGACAGATA TTCCAGAAGGCTAATATTCTCGTTAAAGGCAAAAGAAAAGGAAGAATTGGTCGAGAAGAA GAAGAGCCTTATGGCAAAACTTCAGGTTGGGGACGTGGTAAAATGCTGTATACAAAAAAT TACCTATTTCGGTATATTTGTCGAGGTTGAAGGAGTACTTGCGCTAATTCACCAGACAGA AGTCTCATGGGATGCCACTTTAGACCCTGCGTCGTATTTTAAAATTGGCCAGATTGTGGA GGCAAAAGTTCACCAGTTAGACTTTTCACTTGAGCGCATCTTCTTGTCATTGAAGGAAAT AACGCCAGATCCCATGATGGAGGCCTTAGAGGCTGTAGTTGGTGATCCTGATAATTTGAA TGGAGAACTCCAAGCATCAGAGCTGGATACTGAGTGGCCTGACGTGGAATCTCTTATCAA AGAATTAAAGCAGTTTGAGGGCATCTCCTCTGTATCAAAAGGGCGGTACTTCTTGAGCCC TGGTTTGGCTCCAACATTTCAGGTTTATATGGCATCCATGTTTGAGAATCAATACAAGTT ACTTGCGCGGTCGGGAAATAGAGTACAAGAGGTTATAGTGGAGACATCATTGAGTAAAGA GGAAATGAAATCTGCAATTCAATCTTGTACAAACAAAGTTGAATAACCAATCAAAGCGTA ATAATAAACAATACGAAGAGAGTGATAGATCTTCCCGTGGAGACAACGAACGGATGGTAA GGGTCTGATACCGAATTAGCAAAGTCGGACGTTAGAACAGCAGAAACGGAGAAAAGAAAT GACCTAAACCGCGTTCTATTTTGAACGAAAATGGTATTAATTTTATTGTTTTGCCTTTGA TATCAATAAGTTAGGAGCTTATTTACTGGCTAGTAAGTGTTTTATGTTTAAGCATCGATG TAATACGCTTAAACATCAATCGATTACGCTTCAATATCAAACAAGTTCGCGGTCGACTAT ATGAATTGTCTGTAAAATTTACTATGTGCATTGTGCAGGTTCATGTTGATGCATTGTTCA TGCAATTGTGTTTTCATCTGGTATTTGATAATGCAATTTTGAATAATCCAAAACGGATTG CAGCAATAATTTTTTGATAGTCCGAGCAACATAATTCTTATAATGCTTATAGCTTTATTT GTATCT