Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g007790.3.1
CDS Infomation

3-hydroxy-3-methylglutaryl coenzyme A synthase
Sequence

ATGGCAGCTCAACCGAAGAATGTCGGAATTCTCGCCGTCGAGATTTACTTTCCTCCTACT
TGCCTACAGCAGGAAGCATTGGAGGCTCATGATGGAGCAAGCAAAGGGAAATACACAATT
GGTCTTGGACAAGATTGTATGGGCTTTTGCACTGAGGTGGAAGATGTTATATCAATGAGT
TTGACAGCAGTTACTTCCCTTTTGGAGAAGTATGCTATTGATCCAAAGCAAATTGGTCGT
CTAGAGGTTGGAAGTGAAACCGTAATTGATAAGAGCAAATCCATCAAGACATTCCTGATG
CAAATATTTGAGAAATCTGGAAATACTGACATTGAAGGAGTCGACTCAACTAATGCATGC
TATGGGGGAACTGCCGCATTGTTCAACTGTGTGAATTGGGTCGAAAGCTCTTCATGGGAT
GGTCGCTACGGACTCGTTGTGTGCACTGATAGTGCGGTCTATGCTGAGGGAGCTGCTCGG
CCTACTGGAGGTGCAGCAGCAATTGCTATGCTAGTCGGGCCAGATGCTCCTATTGTGTTC
GAAAGCAAGATTAGGGCTAGCCATATGGCCCATGTCTATGATTTTTACAAGCCCATACTC
GACAGTGAATATCCAGTGGTTGATGGCAAACTTTCACAAACTTGTTATCTTATGGCACTT
GACTCTTGCTACAAGAGCTTATGCAACAAATACGAAAAATTGGAGGGCAAGCAGTTTTCA
ATTGATGATGCAGCCTATTTTGTTTTCCATTCACCATACAACAAGCTTGTACAGAAGAGC
ACTGCTCGGTTGATGTTCAATGACTTTACAAGGAACGCTAGTTCCATTGATGAGTCTACT
AAAGAAAAGTTGGCACCATTTTCATCCCTAACTGGTGATGAGAGTTATCAAAGCCGTGAT
CTTGAGAAGACATCCTGGCAAGTAGCAAAACCATTTTATGACGAGAAGGTAAAACCGGCC
ACATTAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCA
TCCCTCCTTCACAATAAGCACAGCTCATTGGCTGGACAGAGGGTAGTATTGTTCTCTTAC
GGGAGTGGATTGACTGCAACAATGTTCTCATTAAAGCTTCACGAAGGTCAACATCCTTTT
AACTTGTCAAACATCGCAACTGTGATGAACATTGAAGAGAAACTGAAGTCGAGGCATGAG
TTCACTCCTGAAAATTTCATCGAAACTATGAAGATAATGGAGCACAGGTACGGGGGTAAG
GACTTTGTGACGAGCAAGGATTGCAGCCTTCTAGCTCCTGGTACGTACTATCTAACAGAA
GTCGATTCGAAGTACAGAAGATTCTATGCAAAGAAATGTGCTGAGAATGGACTTGCCAAT
GGTCATTGA

Peptide Sequence

PEP ID

Solyc08g007790.3.1
PEP Infomation

3-hydroxy-3-methylglutaryl coenzyme A synthase
Sequence

MAAQPKNVGILAVEIYFPPTCLQQEALEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMS
LTAVTSLLEKYAIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKSGNTDIEGVDSTNAC
YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGAARPTGGAAAIAMLVGPDAPIVF
ESKIRASHMAHVYDFYKPILDSEYPVVDGKLSQTCYLMALDSCYKSLCNKYEKLEGKQFS
IDDAAYFVFHSPYNKLVQKSTARLMFNDFTRNASSIDESTKEKLAPFSSLTGDESYQSRD
LEKTSWQVAKPFYDEKVKPATLIPKQVGNMYTASLYAAFASLLHNKHSSLAGQRVVLFSY
GSGLTATMFSLKLHEGQHPFNLSNIATVMNIEEKLKSRHEFTPENFIETMKIMEHRYGGK
DFVTSKDCSLLAPGTYYLTEVDSKYRRFYAKKCAENGLANGH*

Transcript Sequence

Transcript ID

Solyc08g007790.3.1
Transcript Infomation

3-hydroxy-3-methylglutaryl coenzyme A synthase
Sequence

TATTGATATAATTTTCCTCCATACGATCACATGTATACATGTCTGCCGAACTATTTATTT
ATTTATTTATTTTCTTCATAAGTCTGCGGAATATCAAAATGGAAAATTTCTTAACAGTCT
CCACTCTCCAGTTTTGTATAAATATGTGAAAGCCTGCTAAGCATAAACCATCACTCGCCT
TTCTCTCTCTTCTGCAAAACGAAAAAAAAAAAGTGTGTGTTCGCCGGCGCTTAATTCGAG
GAGATTTAGAGCGAGAGAAAACGTTGTGTTCGCCGGCGTTTATTCCGATCTGTTCAGTTT
AACAGAAGAAGAAAGTAAGTGTTTGTGTGTGTTTTTCCGGCGGTTATTTCGATTTTTTCA
AGTTTAACACTGTTTAGTAAATAATCGGACGGAGAGAAGAAATCGGAAATCGGAGAATGG
CAGCTCAACCGAAGAATGTCGGAATTCTCGCCGTCGAGATTTACTTTCCTCCTACTTGCC
TACAGCAGGAAGCATTGGAGGCTCATGATGGAGCAAGCAAAGGGAAATACACAATTGGTC
TTGGACAAGATTGTATGGGCTTTTGCACTGAGGTGGAAGATGTTATATCAATGAGTTTGA
CAGCAGTTACTTCCCTTTTGGAGAAGTATGCTATTGATCCAAAGCAAATTGGTCGTCTAG
AGGTTGGAAGTGAAACCGTAATTGATAAGAGCAAATCCATCAAGACATTCCTGATGCAAA
TATTTGAGAAATCTGGAAATACTGACATTGAAGGAGTCGACTCAACTAATGCATGCTATG
GGGGAACTGCCGCATTGTTCAACTGTGTGAATTGGGTCGAAAGCTCTTCATGGGATGGTC
GCTACGGACTCGTTGTGTGCACTGATAGTGCGGTCTATGCTGAGGGAGCTGCTCGGCCTA
CTGGAGGTGCAGCAGCAATTGCTATGCTAGTCGGGCCAGATGCTCCTATTGTGTTCGAAA
GCAAGATTAGGGCTAGCCATATGGCCCATGTCTATGATTTTTACAAGCCCATACTCGACA
GTGAATATCCAGTGGTTGATGGCAAACTTTCACAAACTTGTTATCTTATGGCACTTGACT
CTTGCTACAAGAGCTTATGCAACAAATACGAAAAATTGGAGGGCAAGCAGTTTTCAATTG
ATGATGCAGCCTATTTTGTTTTCCATTCACCATACAACAAGCTTGTACAGAAGAGCACTG
CTCGGTTGATGTTCAATGACTTTACAAGGAACGCTAGTTCCATTGATGAGTCTACTAAAG
AAAAGTTGGCACCATTTTCATCCCTAACTGGTGATGAGAGTTATCAAAGCCGTGATCTTG
AGAAGACATCCTGGCAAGTAGCAAAACCATTTTATGACGAGAAGGTAAAACCGGCCACAT
TAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCATCCC
TCCTTCACAATAAGCACAGCTCATTGGCTGGACAGAGGGTAGTATTGTTCTCTTACGGGA
GTGGATTGACTGCAACAATGTTCTCATTAAAGCTTCACGAAGGTCAACATCCTTTTAACT
TGTCAAACATCGCAACTGTGATGAACATTGAAGAGAAACTGAAGTCGAGGCATGAGTTCA
CTCCTGAAAATTTCATCGAAACTATGAAGATAATGGAGCACAGGTACGGGGGTAAGGACT
TTGTGACGAGCAAGGATTGCAGCCTTCTAGCTCCTGGTACGTACTATCTAACAGAAGTCG
ATTCGAAGTACAGAAGATTCTATGCAAAGAAATGTGCTGAGAATGGACTTGCCAATGGTC
ATTGAATATAAGTCCTAGTATGATATAACTTCCATGAATTTTGCTTGTACTCTTTTAATT
ATATAATTGCTTCATAATAACATATAGTTTCTTTCTACTTCCCAACAAATTCAATATTTG
TTTCTTGTATTCTCATCAATGTGTAGTCTTATATATGAATTGAGAAAAACTATATTTTGA
GATCGGCTATATGAATCATTTGTT