Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g007760.3.1
CDS Infomation

YTH domain-containing protein (AHRD V3.3 *** A0A103XRB5_CYNCS)
Sequence

ATGCCATCAGATACTGCAAGAGAAAATGCATCTATAGCTAATTCCATTGAGACCGACTGG
AAAAATGAAAGAGGGAATCTTGGCGGACCAGATAGTTCAAGCCTCAGAGTTAATGAGGAC
ACGAATCGTTCTATAGCAGAGGAGCTCACTTCATCTCTGCCAATTGGAATTTCAAGTGCA
ATTGAAAAGGGTAAACTCTATAGCATAAGATATTTTGTAATCAAGAGTTTGAACCATGAA
AATATCCAATTATCAGTAAACAGAGGGATTTGGGCTACTCAAGCCATGAATGAGGCCATT
TTGGATGAAGCATTTCATAATTCCAGCAAGGTTATACTAATATTCAGTGTCAACATGAGT
GGGTATTTCCAAGGGTACGCCCAAATGATTTCTTCAGTCGGTTTGAGAAGAGACCAAGTA
TGGAGTCAAGGAAATGGTGGTCGTAATCCTTGGGGTCGAAGCTTTGAAGTGAATTGGCTG
CGATTGTATGATCTGCCTTTCCAAAGAACTCTTCACCTTAAGAATCCATGGAATCAATAC
AAACCAGTCAAAATTAGTAGAGATTGTCAGGAGTTACCTCCAGATATTGGTGAAGCTTTA
TGTGAGCTTCTTGATGGAAAGGATGCTTTGGATGTTGATTTGAAAATGGATATCTTTGCA
AGGAATGATTTCTCTTCTAAAAGGCCATATGTAGAGCCTTCACTGCATCTTGGAGATCAA
GACTGTAATGCATCTCTGATACCTAATGGGACTATGTTTTATCCCTCTTTACTCTACCAA
CATCAAATTGATGCTAGTAGACTTCACGTAGCACCTCAGAGAATAAATGGTGTATTTTCT
GCTGAGGAGTCAGCCATTGCATCAGGGGAATCAAAGTCGAGACAGTCGAGGCATTCAAAG
AGGAATAGAAGCCTTGCTAATCTTCATGTAGACACTGAAATGGGTCGTCAAATTAACATG
TGGGGCTTGCCGGCAGAGAGGAGCCCACTTGCTAGTAATTTGACTGAAGATGACATTCTT
GAAATGACATATGAAGAGTATCTTGAAGCTTATAGCAGAGGCAGCAAAAGATCGCCCCAC
CCTGTTTCAGGACCATCACGGAGTACACAGAGGTCATTAGCCAGTGAAGACAACTGTGAT
GATTCGCAATCAGGTTGCAGTTCGAAGAAAAGGAGAAGTCACTAA

Peptide Sequence

PEP ID

Solyc08g007760.3.1
PEP Infomation

YTH domain-containing protein (AHRD V3.3 *** A0A103XRB5_CYNCS)
Sequence

MPSDTARENASIANSIETDWKNERGNLGGPDSSSLRVNEDTNRSIAEELTSSLPIGISSA
IEKGKLYSIRYFVIKSLNHENIQLSVNRGIWATQAMNEAILDEAFHNSSKVILIFSVNMS
GYFQGYAQMISSVGLRRDQVWSQGNGGRNPWGRSFEVNWLRLYDLPFQRTLHLKNPWNQY
KPVKISRDCQELPPDIGEALCELLDGKDALDVDLKMDIFARNDFSSKRPYVEPSLHLGDQ
DCNASLIPNGTMFYPSLLYQHQIDASRLHVAPQRINGVFSAEESAIASGESKSRQSRHSK
RNRSLANLHVDTEMGRQINMWGLPAERSPLASNLTEDDILEMTYEEYLEAYSRGSKRSPH
PVSGPSRSTQRSLASEDNCDDSQSGCSSKKRRSH*

Transcript Sequence

Transcript ID

Solyc08g007760.3.1
Transcript Infomation

YTH domain-containing protein (AHRD V3.3 *** A0A103XRB5_CYNCS)
Sequence

AAATTGGGTCTTTGGGTCAGAAAAATTAGGGCACACTTTATCTCCATCTGGTAAACTGTT
TTGCTACTCTGCTCCTCTTTCTCTCTCCTTTCCACCGGAATTATTGTGATTTTAAAGGAG
GTTGTAAGCAGATATGCCATCAGATACTGCAAGAGAAAATGCATCTATAGCTAATTCCAT
TGAGACCGACTGGAAAAATGAAAGAGGGAATCTTGGCGGACCAGATAGTTCAAGCCTCAG
AGTTAATGAGGACACGAATCGTTCTATAGCAGAGGAGCTCACTTCATCTCTGCCAATTGG
AATTTCAAGTGCAATTGAAAAGGGTAAACTCTATAGCATAAGATATTTTGTAATCAAGAG
TTTGAACCATGAAAATATCCAATTATCAGTAAACAGAGGGATTTGGGCTACTCAAGCCAT
GAATGAGGCCATTTTGGATGAAGCATTTCATAATTCCAGCAAGGTTATACTAATATTCAG
TGTCAACATGAGTGGGTATTTCCAAGGGTACGCCCAAATGATTTCTTCAGTCGGTTTGAG
AAGAGACCAAGTATGGAGTCAAGGAAATGGTGGTCGTAATCCTTGGGGTCGAAGCTTTGA
AGTGAATTGGCTGCGATTGTATGATCTGCCTTTCCAAAGAACTCTTCACCTTAAGAATCC
ATGGAATCAATACAAACCAGTCAAAATTAGTAGAGATTGTCAGGAGTTACCTCCAGATAT
TGGTGAAGCTTTATGTGAGCTTCTTGATGGAAAGGATGCTTTGGATGTTGATTTGAAAAT
GGATATCTTTGCAAGGAATGATTTCTCTTCTAAAAGGCCATATGTAGAGCCTTCACTGCA
TCTTGGAGATCAAGACTGTAATGCATCTCTGATACCTAATGGGACTATGTTTTATCCCTC
TTTACTCTACCAACATCAAATTGATGCTAGTAGACTTCACGTAGCACCTCAGAGAATAAA
TGGTGTATTTTCTGCTGAGGAGTCAGCCATTGCATCAGGGGAATCAAAGTCGAGACAGTC
GAGGCATTCAAAGAGGAATAGAAGCCTTGCTAATCTTCATGTAGACACTGAAATGGGTCG
TCAAATTAACATGTGGGGCTTGCCGGCAGAGAGGAGCCCACTTGCTAGTAATTTGACTGA
AGATGACATTCTTGAAATGACATATGAAGAGTATCTTGAAGCTTATAGCAGAGGCAGCAA
AAGATCGCCCCACCCTGTTTCAGGACCATCACGGAGTACACAGAGGTCATTAGCCAGTGA
AGACAACTGTGATGATTCGCAATCAGGTTGCAGTTCGAAGAAAAGGAGAAGTCACTAAAT
CTCTCCATTGGTTGCATTGGTTTTCTTGGAGAGCAGGCTGATATGGTTGATAGTTGTGTT
GTCGCAGTTGTCGCGAAGTGGTGGCTCTTGCGAAATTTGTTCCTTTATTTTTGTAAAACT
TAAAACTTAGGAGCATATATTGCTGTAATGTTGTAGTATATCTGTACTGTATTATATGAC
CCTCTTGTCACCCTTCTCCCCTTCCTGTTTTCGAATGGAAAATTTTATACTGTCAATGGA
CAACTTGTACAGGAAATTAGCAAGTCTCCCTATACTCATATATTCATTCTTGATAATGTC
AAGTACTGTATAGAAATGGATAATATCTTCTTGATTATTGGGATGGAGTGGAGTTAT