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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g007580.3.1
CDS Infomation

Ycf49-like protein (AHRD V3.3 *** A0A0B0NIP1_GOSAR)
Sequence

ATGAATTTATTTTATTTAAAACTCCATTCATATTTTCTCTTATCTAAAACAAACAAAAAA
GAAAGTGAAAAACTTGACTCAATTCAATCAACAATGGCAGTTCCAATTTCATTATCCCTC
TCAAAACTTCATTCTCTTCCAAATCCAAAACAAACCCAGTTCTCTTTTACACATAAAGAT
CCAAACTTTATCTTCTTTACAAGAAAAAAGACTCATTTTCCAGCACCCATTATCAGTAAT
TTGAAAAATGTTGCTGCAATTTTGGGTTTTTCTGGACTTGCTTTTACAACACTAATGGTG
GGCTCAGCTTCTGGTTCTGAGTTAGGTTTAATGGGTTCTTCTTCTTTTCAATTCAATGAA
CCTTCTAATGCTCTGTCATTGCACACTTGGGCTAGTCATGTTTCCACTATTGTTGAATGG
GTAACTGCTATGGCTCTGGTTTGGCAATATGGAGAAAAGTCGGGTTATGAATCTTGGAAG
GGACTCTCCTGGGGTATGGTGCCCCTGCTTGGAGGAGCACTCTGTGCCTGCACTTGGCAT
TTCTTTTATAACTCGGAGTCTCTTGAGGTAGTAGTGGCTCTACAAGCAGCTTTGACAGTA
ATTGGTAATGCCACAATGTGCTTTGCAGCATTCCGGATATACAGATCAACACAGAACCAG
TCAAAAGAACTGTGA

Peptide Sequence

PEP ID

Solyc08g007580.3.1
PEP Infomation

Ycf49-like protein (AHRD V3.3 *** A0A0B0NIP1_GOSAR)
Sequence

MNLFYLKLHSYFLLSKTNKKESEKLDSIQSTMAVPISLSLSKLHSLPNPKQTQFSFTHKD
PNFIFFTRKKTHFPAPIISNLKNVAAILGFSGLAFTTLMVGSASGSELGLMGSSSFQFNE
PSNALSLHTWASHVSTIVEWVTAMALVWQYGEKSGYESWKGLSWGMVPLLGGALCACTWH
FFYNSESLEVVVALQAALTVIGNATMCFAAFRIYRSTQNQSKEL*

Transcript Sequence

Transcript ID

Solyc08g007580.3.1
Transcript Infomation

Ycf49-like protein (AHRD V3.3 *** A0A0B0NIP1_GOSAR)
Sequence

GCAGAAGTTGTCAATGAATTTATTTTATTTAAAACTCCATTCATATTTTCTCTTATCTAA
AACAAACAAAAAAGAAAGTGAAAAACTTGACTCAATTCAATCAACAATGGCAGTTCCAAT
TTCATTATCCCTCTCAAAACTTCATTCTCTTCCAAATCCAAAACAAACCCAGTTCTCTTT
TACACATAAAGATCCAAACTTTATCTTCTTTACAAGAAAAAAGACTCATTTTCCAGCACC
CATTATCAGTAATTTGAAAAATGTTGCTGCAATTTTGGGTTTTTCTGGACTTGCTTTTAC
AACACTAATGGTGGGCTCAGCTTCTGGTTCTGAGTTAGGTTTAATGGGTTCTTCTTCTTT
TCAATTCAATGAACCTTCTAATGCTCTGTCATTGCACACTTGGGCTAGTCATGTTTCCAC
TATTGTTGAATGGGTAACTGCTATGGCTCTGGTTTGGCAATATGGAGAAAAGTCGGGTTA
TGAATCTTGGAAGGGACTCTCCTGGGGTATGGTGCCCCTGCTTGGAGGAGCACTCTGTGC
CTGCACTTGGCATTTCTTTTATAACTCGGAGTCTCTTGAGGTAGTAGTGGCTCTACAAGC
AGCTTTGACAGTAATTGGTAATGCCACAATGTGCTTTGCAGCATTCCGGATATACAGATC
AACACAGAACCAGTCAAAAGAACTGTGATCATCGTCTTTGAGTCATTTCACCCTACTAGA
TTCTCCGTCTAACTCGTACATAACGTAACGATCGTTGCTCCATGCTAAGAAATGGAAGAG
TTTTTATAGCCAGTGTAGACCGGAGCTCTAAGCTAGGTCAAGAAAGCGGATTCAGAATTT
TGAATTTGTATTGTTTAACTTTTAAGGTTCTTAGACTAAAACTCACTGTACATTTTTGAA
TTCGTGTACTCGAGATTCAAAATTTATAAATATTGATGGTTAAACCAAATTCTCGATTAT
TTCAC