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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g007500.3.1
CDS Infomation

PPR containing protein (AHRD V3.3 *** AT4G22758.1)
Sequence

ATGATCAAAATTTTAAATATAGTTCATCATCGATCAATTTCAATGTGTGAAAGAGCTAGT
GGTAGCGGTGTACAAAAATCGTTATATCTCCCCACGACGTTGAGTCATCGGAGGAGTACT
AGGACCGTGGCACGACGAACATTATTAAAGCATCATAGGGCAAGAATTGAAAGATGGAAA
TCTGAGCCTTGTTTTTGGAGAAATATTAATGGAGATGGAGGTGAAAATGAAGATGATCAT
CGTCGTCGTTTTCATCCACGGGATGTTACTACGACGTCGTTGGAGGTCCTTTTCCGGCCA
CAAACTTGTACGGATTTATTTTTCTCATCGGATCATCTTAATGTTCCTTCTCCAAAGAGT
ACTCAAGTGTACAAGAAGGATGCAAAAGTAGTGGTTAATGTGACAATTGAGGGCACTCTT
GGACCAATTAAAACCATGGTCAAGTTGGGATCAAATGTTAAAGAGACCATAAAACTTGTC
CTAAATAAATATAAAGAAGAAGGTCGAAGTCCTCATCTTGATGATTCTTCATCATTCAAG
CTGTACACTTCTCACTTTAGTCTTGAGAGCTTGAATAATTCAGATGTGATTGGAGATGTG
GGAAGTAGAAGCTTTCACCTTCGCAAGAGTAATAGCAACAATGGAAATAATTCAAAGCAA
TTTAATTCCAATCCATTTCTTGCACTAAAGATCAACAAATTCATAAAAGGAACAAGCAAT
ATTTGGAAACTCCTTAGTTGCATACATTGTTTTGAATAA

Peptide Sequence

PEP ID

Solyc08g007500.3.1
PEP Infomation

PPR containing protein (AHRD V3.3 *** AT4G22758.1)
Sequence

MIKILNIVHHRSISMCERASGSGVQKSLYLPTTLSHRRSTRTVARRTLLKHHRARIERWK
SEPCFWRNINGDGGENEDDHRRRFHPRDVTTTSLEVLFRPQTCTDLFFSSDHLNVPSPKS
TQVYKKDAKVVVNVTIEGTLGPIKTMVKLGSNVKETIKLVLNKYKEEGRSPHLDDSSSFK
LYTSHFSLESLNNSDVIGDVGSRSFHLRKSNSNNGNNSKQFNSNPFLALKINKFIKGTSN
IWKLLSCIHCFE*

Transcript Sequence

Transcript ID

Solyc08g007500.3.1
Transcript Infomation

PPR containing protein (AHRD V3.3 *** AT4G22758.1)
Sequence

ATAACACAAATTATATATTTATATATATCGTCAACAATTAAATAGTGAAAGGATTAATAT
TTATGGTAAATTGTGGATATTCTTAAGCAAACATATAAAAGATGCACAATTTAATTAATT
AAAAATTAAATGTATTTAATTAAATATTATTAGAAACTAAAATCAGAATTTACCAATAAC
TGAACGATTAAAAATAGAATTAATTGACTATAAAGAAAAGGCAAAGAGTAAAAACATAGT
ATATAAATAACATATCACGCAATGTTATTTTAAATATTCCTAAGTAGCTACCTCTACTAC
GAAGCAATCGATCACTTTACTCCCCCCACCACACACACACAAAAAAAATATATATATATT
CCTTTATTACTAAGCAATTTACTTCCATTCATTAATTTAGAACTCACAATGATCAAAATT
TTAAATATAGTTCATCATCGATCAATTTCAATGTGTGAAAGAGCTAGTGGTAGCGGTGTA
CAAAAATCGTTATATCTCCCCACGACGTTGAGTCATCGGAGGAGTACTAGGACCGTGGCA
CGACGAACATTATTAAAGCATCATAGGGCAAGAATTGAAAGATGGAAATCTGAGCCTTGT
TTTTGGAGAAATATTAATGGAGATGGAGGTGAAAATGAAGATGATCATCGTCGTCGTTTT
CATCCACGGGATGTTACTACGACGTCGTTGGAGGTCCTTTTCCGGCCACAAACTTGTACG
GATTTATTTTTCTCATCGGATCATCTTAATGTTCCTTCTCCAAAGAGTACTCAAGTGTAC
AAGAAGGATGCAAAAGTAGTGGTTAATGTGACAATTGAGGGCACTCTTGGACCAATTAAA
ACCATGGTCAAGTTGGGATCAAATGTTAAAGAGACCATAAAACTTGTCCTAAATAAATAT
AAAGAAGAAGGTCGAAGTCCTCATCTTGATGATTCTTCATCATTCAAGCTGTACACTTCT
CACTTTAGTCTTGAGAGCTTGAATAATTCAGATGTGATTGGAGATGTGGGAAGTAGAAGC
TTTCACCTTCGCAAGAGTAATAGCAACAATGGAAATAATTCAAAGCAATTTAATTCCAAT
CCATTTCTTGCACTAAAGATCAACAAATTCATAAAAGGAACAAGCAATATTTGGAAACTC
CTTAGTTGCATACATTGTTTTGAATAATCATCTCAGTGAGATGCGGATTCAAAATTTGAA
ATTTATGATTATGATGTTTATTATTATTATATTAAATAGGGGTAAAATCAATAAAGCTTA
TAAATTTTGAGCTCACTCATTATATCGTATGTATCAAATCATAATGAATAACAAATCAAT
ATATATTTTATTAATTAATGAAATATCTTATATCTTCTTTTGGA