Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g007330.3.1
CDS Infomation

DNA mismatch repair protein mutS (AHRD V3.3 *** A0A0K9NP06_ZOSMR)
Sequence

ATGGAAGAAGACGCCGGAGAAAGATCAAGCTTCGTCGCCGGGTTCATTGAGAACCGAGCC
AAGGAGGTTGGAGTAGCTGCATTTGATTTGAGATCAGCATCACTGCATCTTTCTCAGTAT
ATAGAGACTAGCAGCTCCTATCAAAATACAAAGACTTTACTACAGTTCTATGAACCTATG
GTGATAATTGTTTCCCCCAATAAACTGGCGGCGGATGGAATGGTCGGAGTCTCACAACTG
GCAGACAGAGTTTGTTCCTCCACAAAAAAGGTTATAATGGCCCGTGGTTGCTTTGATGAT
ACCAGGGGAGCTGTACTGGTTAAAGGTTTAGCTGCTAAGGAACCGTCTGCTCTTGGTCTG
GATTCATACTACAAGCAATACTATTTGTGCTTGGCTGCAGCAGCTGCAACTATCAAGTGG
ATCGAAGCAGAGAAAGGTGTTATTATAACAAATCACTCTTTGCTGGTTACTTTCAATGGA
TCTTTTGACCACATGAACATTGATTCCACCAGTGTTCAGAACTTGGAGATAATTGAGCCT
ATGCACGCTTCTCTTCTGGGCACAAACAACAAAAAGAGAAGTTTATTCCACATGCTTAAA
ACAACTCGAACTATTGGAGGGACTAGACTTCTGAGGGCAAATCTTTTGCAGCCTCTGAAA
GACATAGAGACAATTAACACTCGACTCGACTGCCTGGATGAGTTGATGAGCAATGAACAG
CTATTCTTTGGTTTGTCTCAGGCCCTTCGTAAGTTTCCGAAAGAAACAGATCGGGTCCTT
TGTCACTTCTGCTTCAAACCAAAGAGAGTTACTAATGAAGTCTTGGCTTCGGATAATGGA
AGAAGGAGCCAGATAATGATATCCAGCATTATTCTTCTCAAAACAGCTCTTGATGCTTTA
CCGTTACTCTCCAAGGTTCTTAAAGAAGCCAAGAGTTGTCTGCTTGGAAATGTGTACAAA
ACCATATGTGAGAATGAAAAATATACTTCAATAAGCAAAAGAATTGGAGAGGTGATTGAT
GATGATGTCCTTCATACGCGAGTTCCTTTTGTGGCACGGACACAGCAGTGTTTTGCTGTT
AAGGCTGGAGCAGATGGGCTTCTTGATATGGCTCGACGGTCATTCTGTGATACTAGCGAA
GCTATACACAGTCTCGCAAATAAGTATCGTCAAGATTTCAAACTGCCGAACTTGAAGATC
CCATTCAATAACAGGCAAGGGTTTTACTTTAGCATTCCACAGAAGGACATACAGGGAAAA
CTGCCCAGCAAGTTCATCCAGGTCGTGAAACATGGAAACAATGTCCGTTGCTCGAGTCTT
GAACTTGCTTCATTGAATGTGAGGAACAAGTCTGCAGCTAAAGAATGCTGGTTGAGGACT
GCTCTTTGTCTTGAAGCATTAATGGATGCAATACGAGAGGATGTCTCCGTGCTTACTGTT
CTTTCAGAAGTGTTGTGCCTTTTAGATATGATGGTAAATTCATTTGCTCACACTATATCA
ACGAAACCAGTTGATAGATATACTAGAGCTCGTTTTACATGTGATGGCCCATTGGCAATT
GATTCTGGACGGCACCCCATTCTGGAAAGCATACACAATGATTTCATTCCAAATGGCATC
TTTCTTTCTGAAGCATCAAATATGGCTATTGTAATGGGCCCAAACATGAGCGGAAAAAGT
ACTTATCTTCAGCAAGTTTGTTTGATGGTCATCCTTGCTCAAATTGGTTGCTATATTCCT
GCTCGATTTGCCACTTTGAGGGTGGTCGATCGTATTTTTACAAGGATGGGAACAATGGAC
AGTCTCGAATCAAATTCTAGCACGTTCATGACAGAGATGAAGGAGACGGCTTTTATCATG
CAAAACGTGTCCCATAGAAGTTTGATTGTTATGGATGAACTGGGGAGGGCGACCTCATCC
TCTGATGGACTCGCAATCGCGTGGAGCTGTTGTGAGCATCTATTGGCACTTAAAGCGTAC
TCAATATTTGCTACTCATATGGAAAATCTATCAGCGCTATCCACAATGTATCCAAATGTA
AAAATTCTTCATTTTGATGTTGATGTGAGGAATAACCGCATGGACTTCAAGTTTCAACTG
AAGGATGGGTCACGTCATGTGCCACATTACGGCCTCATGCTAGCAGGAGTAGCTGGATTA
CCAAGTTCAGTAGTGGAGACTGCCAAAAGAATCACATCTAGGATCACAGAGAAGGAAATG
AAGAGAATGGAGGTGAACTGCAGACAGTACGAGGACGTACAATTGATTTACCGTGTAGCT
CAACGGCTGATGTGCTTGAAATATTCTGATCAGGATGAAGATTCTTTAAGGGAGGCTCTG
CAGAACCTTAAGGAAAACTATATTGGTGGAAGGCTTTAG

Peptide Sequence

PEP ID

Solyc08g007330.3.1
PEP Infomation

DNA mismatch repair protein mutS (AHRD V3.3 *** A0A0K9NP06_ZOSMR)
Sequence

MEEDAGERSSFVAGFIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
VIIVSPNKLAADGMVGVSQLADRVCSSTKKVIMARGCFDDTRGAVLVKGLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGVIITNHSLLVTFNGSFDHMNIDSTSVQNLEIIEP
MHASLLGTNNKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLASDNGRRSQIMISSIILLKTALDAL
PLLSKVLKEAKSCLLGNVYKTICENEKYTSISKRIGEVIDDDVLHTRVPFVARTQQCFAV
KAGADGLLDMARRSFCDTSEAIHSLANKYRQDFKLPNLKIPFNNRQGFYFSIPQKDIQGK
LPSKFIQVVKHGNNVRCSSLELASLNVRNKSAAKECWLRTALCLEALMDAIREDVSVLTV
LSEVLCLLDMMVNSFAHTISTKPVDRYTRARFTCDGPLAIDSGRHPILESIHNDFIPNGI
FLSEASNMAIVMGPNMSGKSTYLQQVCLMVILAQIGCYIPARFATLRVVDRIFTRMGTMD
SLESNSSTFMTEMKETAFIMQNVSHRSLIVMDELGRATSSSDGLAIAWSCCEHLLALKAY
SIFATHMENLSALSTMYPNVKILHFDVDVRNNRMDFKFQLKDGSRHVPHYGLMLAGVAGL
PSSVVETAKRITSRITEKEMKRMEVNCRQYEDVQLIYRVAQRLMCLKYSDQDEDSLREAL
QNLKENYIGGRL*

Transcript Sequence

Transcript ID

Solyc08g007330.3.1
Transcript Infomation

DNA mismatch repair protein mutS (AHRD V3.3 *** A0A0K9NP06_ZOSMR)
Sequence

TAAACACTACGTCAAACCGGGGCAGTCGGGTAAAAAATTGCTACTCTATATATAACTTGG
CGCGAATGTGAGAAGTCACGTTTTTCACCACTGCTCACTGTTCAGTAGCTGAGTGCTTCG
AGTTCAATGGAAGAAGACGCCGGAGAAAGATCAAGCTTCGTCGCCGGGTTCATTGAGAAC
CGAGCCAAGGAGGTTGGAGTAGCTGCATTTGATTTGAGATCAGCATCACTGCATCTTTCT
CAGTATATAGAGACTAGCAGCTCCTATCAAAATACAAAGACTTTACTACAGTTCTATGAA
CCTATGGTGATAATTGTTTCCCCCAATAAACTGGCGGCGGATGGAATGGTCGGAGTCTCA
CAACTGGCAGACAGAGTTTGTTCCTCCACAAAAAAGGTTATAATGGCCCGTGGTTGCTTT
GATGATACCAGGGGAGCTGTACTGGTTAAAGGTTTAGCTGCTAAGGAACCGTCTGCTCTT
GGTCTGGATTCATACTACAAGCAATACTATTTGTGCTTGGCTGCAGCAGCTGCAACTATC
AAGTGGATCGAAGCAGAGAAAGGTGTTATTATAACAAATCACTCTTTGCTGGTTACTTTC
AATGGATCTTTTGACCACATGAACATTGATTCCACCAGTGTTCAGAACTTGGAGATAATT
GAGCCTATGCACGCTTCTCTTCTGGGCACAAACAACAAAAAGAGAAGTTTATTCCACATG
CTTAAAACAACTCGAACTATTGGAGGGACTAGACTTCTGAGGGCAAATCTTTTGCAGCCT
CTGAAAGACATAGAGACAATTAACACTCGACTCGACTGCCTGGATGAGTTGATGAGCAAT
GAACAGCTATTCTTTGGTTTGTCTCAGGCCCTTCGTAAGTTTCCGAAAGAAACAGATCGG
GTCCTTTGTCACTTCTGCTTCAAACCAAAGAGAGTTACTAATGAAGTCTTGGCTTCGGAT
AATGGAAGAAGGAGCCAGATAATGATATCCAGCATTATTCTTCTCAAAACAGCTCTTGAT
GCTTTACCGTTACTCTCCAAGGTTCTTAAAGAAGCCAAGAGTTGTCTGCTTGGAAATGTG
TACAAAACCATATGTGAGAATGAAAAATATACTTCAATAAGCAAAAGAATTGGAGAGGTG
ATTGATGATGATGTCCTTCATACGCGAGTTCCTTTTGTGGCACGGACACAGCAGTGTTTT
GCTGTTAAGGCTGGAGCAGATGGGCTTCTTGATATGGCTCGACGGTCATTCTGTGATACT
AGCGAAGCTATACACAGTCTCGCAAATAAGTATCGTCAAGATTTCAAACTGCCGAACTTG
AAGATCCCATTCAATAACAGGCAAGGGTTTTACTTTAGCATTCCACAGAAGGACATACAG
GGAAAACTGCCCAGCAAGTTCATCCAGGTCGTGAAACATGGAAACAATGTCCGTTGCTCG
AGTCTTGAACTTGCTTCATTGAATGTGAGGAACAAGTCTGCAGCTAAAGAATGCTGGTTG
AGGACTGCTCTTTGTCTTGAAGCATTAATGGATGCAATACGAGAGGATGTCTCCGTGCTT
ACTGTTCTTTCAGAAGTGTTGTGCCTTTTAGATATGATGGTAAATTCATTTGCTCACACT
ATATCAACGAAACCAGTTGATAGATATACTAGAGCTCGTTTTACATGTGATGGCCCATTG
GCAATTGATTCTGGACGGCACCCCATTCTGGAAAGCATACACAATGATTTCATTCCAAAT
GGCATCTTTCTTTCTGAAGCATCAAATATGGCTATTGTAATGGGCCCAAACATGAGCGGA
AAAAGTACTTATCTTCAGCAAGTTTGTTTGATGGTCATCCTTGCTCAAATTGGTTGCTAT
ATTCCTGCTCGATTTGCCACTTTGAGGGTGGTCGATCGTATTTTTACAAGGATGGGAACA
ATGGACAGTCTCGAATCAAATTCTAGCACGTTCATGACAGAGATGAAGGAGACGGCTTTT
ATCATGCAAAACGTGTCCCATAGAAGTTTGATTGTTATGGATGAACTGGGGAGGGCGACC
TCATCCTCTGATGGACTCGCAATCGCGTGGAGCTGTTGTGAGCATCTATTGGCACTTAAA
GCGTACTCAATATTTGCTACTCATATGGAAAATCTATCAGCGCTATCCACAATGTATCCA
AATGTAAAAATTCTTCATTTTGATGTTGATGTGAGGAATAACCGCATGGACTTCAAGTTT
CAACTGAAGGATGGGTCACGTCATGTGCCACATTACGGCCTCATGCTAGCAGGAGTAGCT
GGATTACCAAGTTCAGTAGTGGAGACTGCCAAAAGAATCACATCTAGGATCACAGAGAAG
GAAATGAAGAGAATGGAGGTGAACTGCAGACAGTACGAGGACGTACAATTGATTTACCGT
GTAGCTCAACGGCTGATGTGCTTGAAATATTCTGATCAGGATGAAGATTCTTTAAGGGAG
GCTCTGCAGAACCTTAAGGAAAACTATATTGGTGGAAGGCTTTAGGTAAGTAGAACCATT
TACTCATATATATTTCATCTAATATCAACACTAAGATCTGAAATTTTGAATCTATCTGAT
AATCTTGGACTAAGAAAGTGGTATTTTAAGATAACTACTATAAAACAAGTGGAATTCTAA
ATATCTGATTATGAAAGGGTTCTTGATTTCTCATGGAGGCCTATTTTAATTTGCATAAAA
TTACAAGTTTTGTTCTTTCACTAGATATGATTGTAAATGAAATTGAGTCTAATTAATGTG
GACCAATAAAAAAAATTACATATTTAGCTAAAATATTTATTTATGTCACATCAACTTTTG
TTCAAAATATGGGGACCTTAAAGGTTTTTTTTTTTTTTT