Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g007170.1.1
CDS Infomation

LOW QUALITY:Transcription factor, putative (AHRD V3.3 *-* A0A061DWU0_THECC)
Sequence

ATGTCGTCTAACGTTGATTCTACCGTCGTAGTAGCAGAAGATGCCGTCCCGGAGGAGAAG
CCACCGCCGCCGGTGAGGAGATTTCCACCGCCGTGTTGGACCCAAGAAGAGACTTTAGCT
CTTATTGAAGCCTACCGTGAACGATGGTACGCGCTCCGCCGCGGGTACCTACGGACGGCG
GATTGGGATGCGGTGGCAGCTACCGTGACCAGCCGCTGCCCAGATGCTTCTCCGGCGAAA
ACATCAGCTCAGTGCCGACACAAAATGGAAAAACTCCGGCAACGCTACCGTGCTGAGAAA
CAGAGATCCCTTTCCTGTCCTACCGGTAGGTTTTTCTCATCTTGGTTCTTCTTTGATAAC
ATGGACGCCATGGAAAATGGTACTACTGTTGCAGCAATCAGATCTAATAATCAACAAATC
GCCGAGAAACAACAAGCGGTTACTGCTGTTTCTGGTGATGGGTATGCTTTAAAAACAATG
ATGGATCAGAATTTTTTGAAATTGAAGATCAATCAAAAGAATGGTATAGATTCACCCCCA
AATTTCATGTTTAATCATGCTTTAGCTGCGACAAAATCCGAAAAGATAAACTTTGCTACT
AGGATTCCAAATGGGTATTGTTCATACATGGATATGGGATCTAACAAACAAGAACCTCCA
CATGATGTTGAGTTTTCAAGTGGGTATAGGATGAAAAATGGAATTTCAATGAAAGCGAAG
CGAACAGGGAGGATTATTGGAGATGTAAATGGATTTGATCGAGGTGGGGGGAATTTTGTA
ATGAATCCTAATTTTGATTGTGATGAAGGAAGTGAATATAATGGAAGTAATGCTAGTGAT
GGTTTCCATATTAGGAATATGGGTGTTTCCAGCTCAAGAAGAAGTTATAATAGCGGGAAT
GTTGAACAACAACCCAATCTTGATTCTAGGTTCAGTCCTGGTTTGTCGAAATTCGGGAAG
AAGGGAGGAGGTGGTGGTGGTTTAGGGATGAAGAGGGGGAGGGATCCGGTGGAAGAGATG
GTTTTATCGATTAAGTTATTAGGCGAAGGGTTCATGAAAATGGAGAAAATGAAGATGGAA
ATGGCAAAGGAAGTAGAGCAAATGAGAATGGAGATGGAGATGAAACGTAACGAGATGATA
CTCGAATCACAGAAGCAGATTGTGGAAGCATTCGTGAAGGTCTTAGGCGAGGTTCACAAG
AACAAGAATGCAAAGCCTGAATCATAG

Peptide Sequence

PEP ID

Solyc08g007170.1.1
PEP Infomation

LOW QUALITY:Transcription factor, putative (AHRD V3.3 *-* A0A061DWU0_THECC)
Sequence

MSSNVDSTVVVAEDAVPEEKPPPPVRRFPPPCWTQEETLALIEAYRERWYALRRGYLRTA
DWDAVAATVTSRCPDASPAKTSAQCRHKMEKLRQRYRAEKQRSLSCPTGRFFSSWFFFDN
MDAMENGTTVAAIRSNNQQIAEKQQAVTAVSGDGYALKTMMDQNFLKLKINQKNGIDSPP
NFMFNHALAATKSEKINFATRIPNGYCSYMDMGSNKQEPPHDVEFSSGYRMKNGISMKAK
RTGRIIGDVNGFDRGGGNFVMNPNFDCDEGSEYNGSNASDGFHIRNMGVSSSRRSYNSGN
VEQQPNLDSRFSPGLSKFGKKGGGGGGLGMKRGRDPVEEMVLSIKLLGEGFMKMEKMKME
MAKEVEQMRMEMEMKRNEMILESQKQIVEAFVKVLGEVHKNKNAKPES*

Transcript Sequence

Transcript ID

Solyc08g007170.1.1
Transcript Infomation

LOW QUALITY:Transcription factor, putative (AHRD V3.3 *-* A0A061DWU0_THECC)
Sequence

ATGTCGTCTAACGTTGATTCTACCGTCGTAGTAGCAGAAGATGCCGTCCCGGAGGAGAAG
CCACCGCCGCCGGTGAGGAGATTTCCACCGCCGTGTTGGACCCAAGAAGAGACTTTAGCT
CTTATTGAAGCCTACCGTGAACGATGGTACGCGCTCCGCCGCGGGTACCTACGGACGGCG
GATTGGGATGCGGTGGCAGCTACCGTGACCAGCCGCTGCCCAGATGCTTCTCCGGCGAAA
ACATCAGCTCAGTGCCGACACAAAATGGAAAAACTCCGGCAACGCTACCGTGCTGAGAAA
CAGAGATCCCTTTCCTGTCCTACCGGTAGGTTTTTCTCATCTTGGTTCTTCTTTGATAAC
ATGGACGCCATGGAAAATGGTACTACTGTTGCAGCAATCAGATCTAATAATCAACAAATC
GCCGAGAAACAACAAGCGGTTACTGCTGTTTCTGGTGATGGGTATGCTTTAAAAACAATG
ATGGATCAGAATTTTTTGAAATTGAAGATCAATCAAAAGAATGGTATAGATTCACCCCCA
AATTTCATGTTTAATCATGCTTTAGCTGCGACAAAATCCGAAAAGATAAACTTTGCTACT
AGGATTCCAAATGGGTATTGTTCATACATGGATATGGGATCTAACAAACAAGAACCTCCA
CATGATGTTGAGTTTTCAAGTGGGTATAGGATGAAAAATGGAATTTCAATGAAAGCGAAG
CGAACAGGGAGGATTATTGGAGATGTAAATGGATTTGATCGAGGTGGGGGGAATTTTGTA
ATGAATCCTAATTTTGATTGTGATGAAGGAAGTGAATATAATGGAAGTAATGCTAGTGAT
GGTTTCCATATTAGGAATATGGGTGTTTCCAGCTCAAGAAGAAGTTATAATAGCGGGAAT
GTTGAACAACAACCCAATCTTGATTCTAGGTTCAGTCCTGGTTTGTCGAAATTCGGGAAG
AAGGGAGGAGGTGGTGGTGGTTTAGGGATGAAGAGGGGGAGGGATCCGGTGGAAGAGATG
GTTTTATCGATTAAGTTATTAGGCGAAGGGTTCATGAAAATGGAGAAAATGAAGATGGAA
ATGGCAAAGGAAGTAGAGCAAATGAGAATGGAGATGGAGATGAAACGTAACGAGATGATA
CTCGAATCACAGAAGCAGATTGTGGAAGCATTCGTGAAGGTCTTAGGCGAGGTTCACAAG
AACAAGAATGCAAAGCCTGAATCATAG